prot_Ecto-sp9_F_contig8835.17015.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8835.17015.1
Unique Nameprot_Ecto-sp9_F_contig8835.17015.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length846
Homology
BLAST of mRNA_Ecto-sp9_F_contig8835.17015.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G542_ECTSI)

HSP 1 Score: 893 bits (2307), Expect = 2.380e-304
Identity = 652/848 (76.89%), Postives = 658/848 (77.59%), Query Frame = 0
Query:    1 MVSCVQLHLMKAAAEAGGGXG-RGDGTQDPGGELGLGGTLARAIVMCVCTVSASMEAWQSSGMKGGSWTEDGATSRAVRLCLSLAGSLAGLHRKTSQRGWEKVTAAGVGVFLDWLTCKPQFGEGARGTRPEEFQRVMACVVEFANGIIRASSASGGXXGKGVSDXXXXXXXXXXXXXXXXXXXDGADDAEQPEIDPDSTLWEDEVCRGLPALEAVAQRRTAKARKRARDPPRGSDETRTDNGGHDGGSSXXXXXGAGAAGRPGSKLWADTSSDRVEKDRSXXXXXXXXXXXXXXXXXXAADVWKIRVARLRKQVEFCVERGWIARGNRPGTYTLPKPPPRFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-IAVEDFPEGGFAGEGYGGGGVVGFPTDGLPXXXXXXXXXXXXXXXXXXXXXXXTLWVEADAGSSGTAARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGDNPLPDSVLEVILAGLGSPNDDGEELLLCAYCCATLSPAATECGVCGAPTPAXXXXXXXXXXXXXXXXXXXETMPTCEWKAYRLAEDGRPYYSDGESSVWVKPKELEDYEAALAAAATEGESAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALPAGVLAVGDLAEVMARSKPSLPGTTAASGAGRGGXXXXXXXXX-DAHNPAKIARAGLGDGGAGXXXXXXXXXXXXXXXXAMFGWPRGAPRSALPLVVIDVPNVAMRHGLNKKFSCTGVQMAVEYFRTAGHRVLG 845
            MVSCVQLHLMKAAAEAG  X  RGDGTQDPGGE GLGGTLAR+IVMCVCTVSASME   SSGMKGGSWTEDGATSRAVRLCLSLAGSLAGLHRKTSQRGWEKVTAAGVGVFLDWLTCKPQFGEGARGTRPEEFQRVMACVVEFANGIIRASSASGG  GKGVSD        XXXX       DGADD EQPEIDPDSTLWEDEVCRGLPALE V++RRTAKARKRARDPPRGSDETRTDNGGHDGGSSXXXXXGAGAAGRPGSKLWADTSSDRVEKDRSXXXXXXXXXXXXXXXXXXAADVWKIRVARLRKQVEFCVERGWIARGNRPGTYTLPKPPPRFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX IAVEDFPEGGFAGEGYGGGGVVGFPTD LP              XXXXXXX  TLWVEADAGSSGTAARXXXXXXXXXXXXXX                 Y    XXXXXXXXXXXXXXXXXXXXXXXXXXX                    RGD+PLPDSVLEV+LAGLGSPNDDGEELLLCAYCCATLSPAATECGVCGAPTPA                   ETMPTC+WKAYRLAEDGRPYYSDGESSVWVKPKELEDYEAALAA        XXXXXXXXXX                                                 ALPAGVLAVGDLAEVMARSKPSLPGTTAASGAGRGGX         DAHNPAKIARAG       XXXX            AMFGWPRGAPRSALPLVVIDVPNVAMRHGLNKKFSCTGVQMAVEYFRTAGHRVLG
Sbjct:  703 MVSCVQLHLMKAAAEAGXXXXXRGDGTQDPGGEQGLGGTLARSIVMCVCTVSASME---SSGMKGGSWTEDGATSRAVRLCLSLAGSLAGLHRKTSQRGWEKVTAAGVGVFLDWLTCKPQFGEGARGTRPEEFQRVMACVVEFANGIIRASSASGGGSGKGVSDDAFSSAPRXXXXPGGAG--DGADDGEQPEIDPDSTLWEDEVCRGLPALETVSRRRTAKARKRARDPPRGSDETRTDNGGHDGGSSXXXXXGAGAAGRPGSKLWADTSSDRVEKDRSXXXXXXXXXXXXXXXXXXAADVWKIRVARLRKQVEFCVERGWIARGNRPGTYTLPKPPPRFGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIAVEDFPEGGFAGEGYGGGGVVGFPTDRLPPPLADAARGRGAPGXXXXXXX--TLWVEADAGSSGTAARXXXXXXXXXXXXXXARQPPRVPVVPPGHQRNYVLTGXXXXXXXXXXXXXXXXXXXXXXXXXXXDGG-----------------RGDHPLPDSVLEVVLAGLGSPNDDGEELLLCAYCCATLSPAATECGVCGAPTPAAAAVAAAAA----------ETMPTCKWKAYRLAEDGRPYYSDGESSVWVKPKELEDYEAALAANGAXXXXXXXXXXXXXXXG------------------------------------------------ALPAGVLAVGDLAEVMARSKPSLPGTTAASGAGRGGXGRSGRGAGRDAHNPAKIARAGXXXXXXXXXXXSPSAGAAAGGGGAMFGWPRGAPRSALPLVVIDVPNVAMRHGLNKKFSCTGVQMAVEYFRTAGHRVLG 1468          
BLAST of mRNA_Ecto-sp9_F_contig8835.17015.1 vs.
Match: ZC3H12C (protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QTR6_SYMMI)

HSP 1 Score: 68.9 bits (167), Expect = 8.900e-10
Identity = 27/41 (65.85%), Postives = 36/41 (87.80%), Query Frame = 0
Query:  804 LPLVVIDVPNVAMRHGLNKKFSCTGVQMAVEYFRTAGHRVL 844
            LPL+VID PNVAMRHG+N KFSC G+++A+++F  AGHRV+
Sbjct:   53 LPLIVIDAPNVAMRHGINSKFSCRGIKLAIDFFHAAGHRVV 93          
BLAST of mRNA_Ecto-sp9_F_contig8835.17015.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RBE1_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 1.940e-8
Identity = 28/44 (63.64%), Postives = 36/44 (81.82%), Query Frame = 0
Query:  802 SALPLVVIDVPNVAMRHGLNKKFSCTGVQMAVEYFRTAGHRVLG 845
            SALPL+V+D PN+AMRHG  +KFSC G+++A  +F  AGHRVLG
Sbjct:  326 SALPLIVLDAPNIAMRHGRKEKFSCRGIEIAAHFFSVAGHRVLG 369          
BLAST of mRNA_Ecto-sp9_F_contig8835.17015.1 vs.
Match: RNase (NYN domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6K7_GLOUD)

HSP 1 Score: 65.5 bits (158), Expect = 2.370e-8
Identity = 27/40 (67.50%), Postives = 34/40 (85.00%), Query Frame = 0
Query:  806 LVVIDVPNVAMRHGLNKKFSCTGVQMAVEYFRTAGHRVLG 845
            L+VID PNVAMRHG +KKFSC G+++A+EYF   GHRV+G
Sbjct:   27 LIVIDAPNVAMRHGFHKKFSCIGIRLAIEYFVQRGHRVVG 66          
BLAST of mRNA_Ecto-sp9_F_contig8835.17015.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W434_9STRA)

HSP 1 Score: 68.6 bits (166), Expect = 4.000e-8
Identity = 28/44 (63.64%), Postives = 36/44 (81.82%), Query Frame = 0
Query:  802 SALPLVVIDVPNVAMRHGLNKKFSCTGVQMAVEYFRTAGHRVLG 845
            SALPL+V+D PN+AMRHG  +KFSC G+++A  +F  AGHRVLG
Sbjct:  639 SALPLIVLDAPNIAMRHGRKEKFSCRGIEIAAHFFSVAGHRVLG 682          
BLAST of mRNA_Ecto-sp9_F_contig8835.17015.1 vs.
Match: Hypothetical (protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2MUR0_9EUKA)

HSP 1 Score: 64.3 bits (155), Expect = 1.640e-7
Identity = 27/49 (55.10%), Postives = 37/49 (75.51%), Query Frame = 0
Query:  796 PRGAPRSALPLVVIDVPNVAMRHGLNKKFSCTGVQMAVEYFRTAGHRVL 844
            PR  P   LPL+VID PNVA++HG   KFS  G+++A+EY++ AGHRV+
Sbjct:   93 PRRNPSQPLPLIVIDAPNVAIKHGKRVKFSSRGIELAIEYWKAAGHRVI 141          
BLAST of mRNA_Ecto-sp9_F_contig8835.17015.1 vs.
Match: Hypothetical (protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0NB25_9CHLO)

HSP 1 Score: 60.1 bits (144), Expect = 9.820e-7
Identity = 24/40 (60.00%), Postives = 32/40 (80.00%), Query Frame = 0
Query:  806 LVVIDVPNVAMRHGLNKKFSCTGVQMAVEYFRTAGHRVLG 845
            L+++D PNVAMRHG  K FSC G+++AVEY+   GH+VLG
Sbjct:    5 LIILDAPNVAMRHGRKKVFSCEGIRLAVEYWTARGHKVLG 44          
BLAST of mRNA_Ecto-sp9_F_contig8835.17015.1 vs.
Match: RNase (NYN domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RU66_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 2.400e-6
Identity = 25/39 (64.10%), Postives = 30/39 (76.92%), Query Frame = 0
Query:  806 LVVIDVPNVAMRHGLNKKFSCTGVQMAVEYFRTAGHRVL 844
            L+VID PNVAMRHG  K FSC G+  AV+YF+  GHRV+
Sbjct:   39 LIVIDAPNVAMRHGKGKTFSCAGIDFAVKYFQALGHRVV 77          
BLAST of mRNA_Ecto-sp9_F_contig8835.17015.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NEM7_PHYIT)

HSP 1 Score: 62.4 bits (150), Expect = 3.580e-6
Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 0
Query:  806 LVVIDVPNVAMRHGLNKKFSCTGVQMAVEYFRTAGHRVL 844
            L+VID PNVAMRHG  K FSCTG+++AV YF+  GHRV+
Sbjct:  717 LIVIDAPNVAMRHGKGKVFSCTGIELAVNYFQALGHRVV 755          
BLAST of mRNA_Ecto-sp9_F_contig8835.17015.1 vs.
Match: Zc3h12a-like (Ribonuclease NYN domain n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833SHH2_PHYIN)

HSP 1 Score: 62.4 bits (150), Expect = 3.600e-6
Identity = 26/39 (66.67%), Postives = 32/39 (82.05%), Query Frame = 0
Query:  806 LVVIDVPNVAMRHGLNKKFSCTGVQMAVEYFRTAGHRVL 844
            L+VID PNVAMRHG  K FSCTG+++AV YF+  GHRV+
Sbjct:  730 LIVIDAPNVAMRHGKGKVFSCTGIELAVNYFQALGHRVV 768          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8835.17015.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
Uncharacterized2.380e-30476.89protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G542... [more]
ZC3H12C8.900e-1065.85protein n=1 Tax=Symbiodinium microadriaticum TaxID... [more]
Hypothetical1.940e-863.64protein (Fragment) n=1 Tax=Rhizochromulina marina ... [more]
RNase2.370e-867.50NYN domain-containing protein n=1 Tax=Globisporang... [more]
Hypothetical4.000e-863.64protein (Fragment) n=2 Tax=Rhizochromulina marina ... [more]
Hypothetical1.640e-755.10protein n=1 Tax=Haptolina brevifila TaxID=156173 R... [more]
Hypothetical9.820e-760.00protein n=1 Tax=Pyramimonas obovata TaxID=1411642 ... [more]
RNase2.400e-664.10NYN domain-containing protein n=3 Tax=Phytophthora... [more]
Uncharacterized3.580e-666.67protein n=1 Tax=Phytophthora infestans (strain T30... [more]
Zc3h12a-like3.600e-666.67Ribonuclease NYN domain n=1 Tax=Phytophthora infes... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021869Ribonuclease Zc3h12a-like, NYN domainPFAMPF11977RNase_Zc3h12acoord: 806..843
e-value: 6.8E-8
score: 32.4
NoneNo IPR availableGENE3D3.40.50.11980coord: 804..845
e-value: 3.8E-10
score: 41.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8835contigEcto-sp9_F_contig8835:209..5339 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8835.17015.1mRNA_Ecto-sp9_F_contig8835.17015.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8835 185..5339 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8835.17015.1 ID=prot_Ecto-sp9_F_contig8835.17015.1|Name=mRNA_Ecto-sp9_F_contig8835.17015.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=846bp
MVSCVQLHLMKAAAEAGGGGGRGDGTQDPGGELGLGGTLARAIVMCVCTV
SASMEAWQSSGMKGGSWTEDGATSRAVRLCLSLAGSLAGLHRKTSQRGWE
KVTAAGVGVFLDWLTCKPQFGEGARGTRPEEFQRVMACVVEFANGIIRAS
SASGGGSGKGVSDDAFSSAPRRRRRRLPGGGGDGADDAEQPEIDPDSTLW
EDEVCRGLPALEAVAQRRTAKARKRARDPPRGSDETRTDNGGHDGGSSGS
DSGGAGAAGRPGSKLWADTSSDRVEKDRSGKEREGGSRPSSSSSSSSAAD
VWKIRVARLRKQVEFCVERGWIARGNRPGTYTLPKPPPRFGGSSGPPRDD
ENLPSEEHHHHSQDGDGGGMPPPPIAVEDFPEGGFAGEGYGGGGVVGFPT
DGLPPPPPLADAARVRGAPGGGTSGGGTLWVEADAGSSGTAARGGGGGGS
SGAPRTRARQPPRVPVVPPGQQRDYVLAGAGAGTRAAAATADQARGGAAA
AAGGGGGGGLSPRLLTAGGGGGGGGGRGDNPLPDSVLEVILAGLGSPNDD
GEELLLCAYCCATLSPAATECGVCGAPTPAAAAAAAAAAAAAAAAAAAAE
TMPTCEWKAYRLAEDGRPYYSDGESSVWVKPKELEDYEAALAAAATEGES
AATDAAATAAAAAASAAPLPPTPPAASAAAVAAPVLPATSAENGVAAAAA
AAVGGGGSGGALPAGVLAVGDLAEVMARSKPSLPGTTAASGAGRGGGRSG
RGAGRDAHNPAKIARAGLGDGGAGGSGRSSSAGAAAGGGGAMFGWPRGAP
RSALPLVVIDVPNVAMRHGLNKKFSCTGVQMAVEYFRTAGHRVLG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021869RNase_Zc3h12_NYN