prot_Ecto-sp9_F_contig8827.17009.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8827.17009.1
Unique Nameprot_Ecto-sp9_F_contig8827.17009.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length110
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8827.17009.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0P4_ECTSI)

HSP 1 Score: 59.3 bits (142), Expect = 4.450e-8
Identity = 30/35 (85.71%), Postives = 30/35 (85.71%), Query Frame = 0 
Query:   55 EGSCGQGPKGHRDRTLAAEEAGSPPREGRSVDPRQ 89
            E SCGQGPKGHRDR  AAEEAGSPPREG SVDP Q
Sbjct:  179 EASCGQGPKGHRDRAPAAEEAGSPPREGGSVDPWQ 213
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8827.17009.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized4.450e-885.71protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8827contigEcto-sp9_F_contig8827:4047..5472 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8827.17009.1mRNA_Ecto-sp9_F_contig8827.17009.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8827 4046..5472 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8827.17009.1 ID=prot_Ecto-sp9_F_contig8827.17009.1|Name=mRNA_Ecto-sp9_F_contig8827.17009.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=110bp
RAASGRRGRGHRLPGAVCCRSGNFARSAARHEVGSAARREVGSAAAAGPR
DGAGEGSCGQGPKGHRDRTLAAEEAGSPPREGRSVDPRQLSHRRSVGVAN
PPDIILDNIT
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