prot_Ecto-sp9_F_contig8815.17000.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8815.17000.1
Unique Nameprot_Ecto-sp9_F_contig8815.17000.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length442
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8815.17000.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLZ4_ECTSI)

HSP 1 Score: 453 bits (1166), Expect = 1.430e-151
Identity = 368/447 (82.33%), Postives = 372/447 (83.22%), Query Frame = 0 
Query:    1 RAPLSSTRSLRQMWRDRDSGESTPRASTARAGSLPSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--STIYSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSEGDGRGXXXXXXXXXGRSPRWTVGAAVAGRLEGMRARELGASLRAKVQENEAMKRYVESVTEEMRALQQKISQQSXXXXXXXXXXXXXXXXXXXXXXXXX----AGTAAPLVTSGPGEEQLSIAEMVARGIGAARQDPAAHPGAGAGERLFDGRRNPNPSLRGATALGADGGVGTEAGAAVPRARVVQVEGGSAVAEAPATTMQRANGDAGAVAAAGLKGGEFSSVTAAAGAPAAPGHGGAQREVGTAEAVAVAVTAAQVPPSVEATMVGXXXXXXXXXXXXXXQPVGVEAGAVRVSISQLLDAKRAQLQSILDAPHIQA 441
            RAPLSSTRSLRQMWRDRDSGESTPRASTARAGSLPSSA       XXXXXXXXXXXXXXXXXXXXXXXXXXX   STIYSSR                                           FSEGD   XXXXXXXXX RSPRWTVGAAVAGRLEGMRARELGASLRAKVQENEAMKRYVESVTEEMRALQQKISQQSXXXXXXXXXXXXXXXXXXXXXXXXX    AGTAAPLVTS PGEEQLSIAE VARGIGAARQDPAA PGAGAGE L DGRRNPNPSLRGATALGADGG+GTEA AAVP+ARVVQV+GGSAVAEAPA TMQRA GDAGAVAAAGLKGGEFSS TAAAGAPAAPG+G AQ EVGTAEAVAVAVTAAQVPPSVEATMVGXXXXXXXXXXX   QPVGVEAGAVRVSISQLLDAKRAQLQSILDAPHIQA
Sbjct:  194 RAPLSSTRSLRQMWRDRDSGESTPRASTARAGSLPSSAVGGAGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTIYSSRGGSISRKGSMSLDGFSTASMGAGGEGGGPLSVRGAAMRHSSRGFSEGDXXXXXXXXXXXXXRSPRWTVGAAVAGRLEGMRARELGASLRAKVQENEAMKRYVESVTEEMRALQQKISQQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTAAPLVTSRPGEEQLSIAEKVARGIGAARQDPAAQPGAGAGEGLLDGRRNPNPSLRGATALGADGGLGTEAAAAVPKARVVQVDGGSAVAEAPAMTMQRAGGDAGAVAAAGLKGGEFSSFTAAAGAPAAPGYGDAQGEVGTAEAVAVAVTAAQVPPSVEATMVGXXXXXXXXXXX---QPVGVEAGAVRVSISQLLDAKRAQLQSILDAPHIQA 637
[Close]
BLAST of mRNA_Ecto-sp9_F_contig8815.17000.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JD62_9PHAE)

HSP 1 Score: 233 bits (595), Expect = 9.710e-67
Identity = 222/442 (50.23%), Postives = 228/442 (51.58%), Query Frame = 0 
Query:    1 RAPLSSTRSLRQMWRDRDSGESTPRASTARAGSLPSSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG-STIYSSRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFSEGDGRGXXXXXXXXXGRSPRWTVGAAVAGRLEGMRARELGASLRAKVQENEAMKRYVESVTEEMRALQQKISQQSXXXXXXXXXXXXXXXXXXXXXXXXXAGTAAPLVTSGPGEEQLSIAEMVARGIGAARQDPAAHPGAGAGERLFDGRRNPNPSLRGATALGADGGVGTEAGAAVPRARVVQVEGGSAVAEAPATTMQRANGDAGAVAAAGLKGGEFSSVTAAAGAPAAPGHGGAQREVGTAEAVAVAVTAAQVPPSVEATMVGXXXXXXXXXXXXXXQPVGVEAGAVRVSISQLLDAKRAQLQSILDAPHIQA 441
            RAPLSSTRSLRQ+WRDRDSGESTPRASTARAGSLPS A       XXXXXXXXXXXXXXXXXXXXXXXXXXX  STIYSSR                                           FSEGDGRG         GRSPRWTVGAAVAGRLEGMRARELGASLRAKVQENEAMKRYVESVT                                                       + I +                                                                              +R +GDAGAVAA+G KGGEFSSVTAAAGA AAPGHGGAQREVGTAEAVAVAVTAAQVPPSVEATMVG              QPVGVEAGAVRVSISQLLDAKRAQLQSILDAPHIQA
Sbjct:  316 RAPLSSTRSLRQIWRDRDSGESTPRASTARAGSLPSGAGGEAGQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTIYSSRGGSISRKGSMSLDGFSTASMGAGGEGGGPLSVRGAAMRHSSRGFSEGDGRGNGG------GRSPRWTVGAAVAGRLEGMRARELGASLRAKVQENEAMKRYVESVT-------------------------------------------------------MCIRD------------------------------------------------------------------------------KREDGDAGAVAASGPKGGEFSSVTAAAGALAAPGHGGAQREVGTAEAVAVAVTAAQVPPSVEATMVGGAGGISSEPQKQQ-QPVGVEAGAVRVSISQLLDAKRAQLQSILDAPHIQA 617
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8815.17000.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.430e-15182.33protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized9.710e-6750.23protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 175..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8815contigEcto-sp9_F_contig8815:2680..5670 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8815.17000.1mRNA_Ecto-sp9_F_contig8815.17000.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8815 2680..5670 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8815.17000.1 ID=prot_Ecto-sp9_F_contig8815.17000.1|Name=mRNA_Ecto-sp9_F_contig8815.17000.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=442bp
RAPLSSTRSLRQMWRDRDSGESTPRASTARAGSLPSSAGGGAGQGGAAAA
AAAAGAAAAAAAAAGGCFDGGGGSTIYSSRGGSISRKGSMSLDGFSTASM
GAGGEGGGPLSGRGGAMRHSSRGFSEGDGRGDGGGGVGGGGRSPRWTVGA
AVAGRLEGMRARELGASLRAKVQENEAMKRYVESVTEEMRALQQKISQQS
SPASPPPRRPMLSSYAGGGGGGGGGAGTAAPLVTSGPGEEQLSIAEMVAR
GIGAARQDPAAHPGAGAGERLFDGRRNPNPSLRGATALGADGGVGTEAGA
AVPRARVVQVEGGSAVAEAPATTMQRANGDAGAVAAAGLKGGEFSSVTAA
AGAPAAPGHGGAQREVGTAEAVAVAVTAAQVPPSVEATMVGGGGGISSEQ
QQQQQQPVGVEAGAVRVSISQLLDAKRAQLQSILDAPHIQA*
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