prot_Ecto-sp9_F_contig8805.16992.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig8805.16992.1
Unique Name	prot_Ecto-sp9_F_contig8805.16992.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	445

Homology

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BLAST of mRNA_Ecto-sp9_F_contig8805.16992.1 vs.
Match: Villin (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCX9_ECTSI)

HSP 1 Score: 867 bits (2239), Expect = 3.190e-296
Identity = 430/445 (96.63%), Postives = 435/445 (97.75%), Query Frame = 0

Query:    1 EGEFQTFQVPPTVGSFNSMDVFVCICTVVTDDWVGNNDEAVFFWVGRHATLALQEHGAKVLMALMEYYCMPADFNVSILEEDELYDDHAQLWDDLSEMLGGEVAWANWNGVFDEDEFDADEDLGVVPKLYVADTGTGNVVLTHVGHVQRECLLSETVAVLDTVEGVYVWRGLHADSSQFALICRACGEYCRNKPLPVGRKVIKVREGQEPLVFRARFQSWDDGGSGEAKKFQDVYEQRVVQMSKEGTLGDMSALRGRVLGDEEAAQYWEERGAAPGGQGVRSGVFRDDPASRSTQRRGAPGRKAWVKPPPKPVVVDKTKELDARRNFLALKDRFEGSGGSSAEAFNKPTTRTFSRRSLLEARQESIKLGTSTKFKEADQQQNNRGLAATGRRQSWQPQSQPGQQEGEDDDPWANQGEPAEVDPHVFLSRHSWGSASSARRRHNAV 445
            E     F+VPPTVGSFNSMDVFVCICTVVTDDWVGNNDEAVFFWVGRHATLALQEHGAKVLMALMEYYCMPADFNVSILEEDELYDDHAQLWDDLSEMLGGEVAWANWNGVFDEDEFDADEDLGVVPKLYVADTGTGNVVLTHVGH+QRECLLSETVAVLDTVEGVYVWRGLHADSSQFALICRACGEYCRNKPLPVGRKVIKVREG+EPLVFRARFQSWDDGG GEAKKFQDVYEQRVVQMSKEGTLGDMSALRGRVLGDEEAAQYWEERGAAPGGQGVRSGVFRDDPASRSTQRRGAPGRKAWVKPPPKPVVVDKTKELDA+RNFLALKDRFEG+GGSSAEAFNKPTTRTFSRRSLLEARQESIK GTSTKFKEADQQQNNRGLAATGRRQSWQ  SQPGQQEGEDDDPWANQ EPAEVDPHVFLSRHSWGSASSARRRHNAV
Sbjct:  961 EKRVSLFKVPPTVGSFNSMDVFVCICTVVTDDWVGNNDEAVFFWVGRHATLALQEHGAKVLMALMEYYCMPADFNVSILEEDELYDDHAQLWDDLSEMLGGEVAWANWNGVFDEDEFDADEDLGVVPKLYVADTGTGNVVLTHVGHLQRECLLSETVAVLDTVEGVYVWRGLHADSSQFALICRACGEYCRNKPLPVGRKVIKVREGREPLVFRARFQSWDDGGPGEAKKFQDVYEQRVVQMSKEGTLGDMSALRGRVLGDEEAAQYWEERGAAPGGQGVRSGVFRDDPASRSTQRRGAPGRKAWVKPPPKPVVVDKTKELDAKRNFLALKDRFEGTGGSSAEAFNKPTTRTFSRRSLLEARQESIKQGTSTKFKEADQQQNNRGLAATGRRQSWQ--SQPGQQEGEDDDPWANQVEPAEVDPHVFLSRHSWGSASSARRRHNAV 1403

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BLAST of mRNA_Ecto-sp9_F_contig8805.16992.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR08_9PHAE)

HSP 1 Score: 826 bits (2134), Expect = 1.280e-289
Identity = 411/427 (96.25%), Postives = 416/427 (97.42%), Query Frame = 0

Query:   19 MDVFVCICTVVTDDWVGNNDEAVFFWVGRHATLALQEHGAKVLMALMEYYCMPADFNVSILEEDELYDDHAQLWDDLSEMLGGEVAWANWNGVFDEDEFDADEDLGVVPKLYVADTGTGNVVLTHVGHVQRECLLSETVAVLDTVEGVYVWRGLHADSSQFALICRACGEYCRNKPLPVGRKVIKVREGQEPLVFRARFQSWDDGGSGEAKKFQDVYEQRVVQMSKEGTLGDMSALRGRVLGDEEAAQYWEERGAAPGGQGVRSGVFRDDPASRSTQRRGAPGRKAWVKPPPKPVVVDKTKELDARRNFLALKDRFEGSGGSSAEAFNKPTTRTFSRRSLLEARQESIKLGTSTKFKEADQQQNNRGLAATGRRQSWQPQSQPGQQEGEDDDPWANQGEPAEVDPHVFLSRHSWGSASSARRRHNAV 445
            MDVFVCICTVVTDDWVGNNDEAVFFWVGR+ATLALQEHGAKVLMALMEYYCMPADFNVSILEEDELYDDHAQLWDDLSEMLGGEVAWANWNGVFDEDEFDADEDLGVVPKLYVADTGTGNV+LTHVGHVQRECLLSETVAVLDTVEGVYVWRG HADSSQFALICRAC EYCRNKPLPVGRKVIKVREGQEPLVFRARFQSWDDGG GEAKKFQDVYEQRVVQMSKEGTLGDMSALRGRVLGDEEAAQYWEERGAAPGGQGVRSGVFRDDPASRSTQRRGAPGRKAWVKPPPKPVVVDKTKELDA+RNFLALKDRFEG+GGSSAEAFNKPTTRTFSRRSLLEARQESIKLGTSTKFKEADQQQN RGLAATGRRQSWQ QS   QQ GED DPWA+Q EPAEVDPHVFLSRHSWGSASSARRRHNAV
Sbjct:    1 MDVFVCICTVVTDDWVGNNDEAVFFWVGRYATLALQEHGAKVLMALMEYYCMPADFNVSILEEDELYDDHAQLWDDLSEMLGGEVAWANWNGVFDEDEFDADEDLGVVPKLYVADTGTGNVMLTHVGHVQRECLLSETVAVLDTVEGVYVWRGFHADSSQFALICRACEEYCRNKPLPVGRKVIKVREGQEPLVFRARFQSWDDGGPGEAKKFQDVYEQRVVQMSKEGTLGDMSALRGRVLGDEEAAQYWEERGAAPGGQGVRSGVFRDDPASRSTQRRGAPGRKAWVKPPPKPVVVDKTKELDAKRNFLALKDRFEGTGGSSAEAFNKPTTRTFSRRSLLEARQESIKLGTSTKFKEADQQQNTRGLAATGRRQSWQQQSD--QQGGEDGDPWAHQAEPAEVDPHVFLSRHSWGSASSARRRHNAV 425

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BLAST of mRNA_Ecto-sp9_F_contig8805.16992.1 vs.
Match: PH (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YST9_9STRA)

HSP 1 Score: 138 bits (347), Expect = 2.270e-31
Identity = 96/277 (34.66%), Postives = 140/277 (50.54%), Query Frame = 0

Query:    4 FQTFQVPPTVGSFNSMDVFVCICTVVTDDWVGNNDEAVFFWVGRHATLALQEHGAKVLMALMEYYCMPADFNVSILEEDELYD---DHAQLWDDLSEMLGGEVA--WANWNGVFDEDEFDADEDL--GVVPKLYVADTGTGNVVLTHVGHVQRECLLSETVAVLDTVEGVYVWRGLHADSSQFALICRACGEYCRNKPLPVGR-KVIK-VREGQEPLVFRARFQSWDDGGSGEAKKFQDVYEQRVVQMSKEGTLGDMSALRGRVLGDEEAAQYWEER 271
            F+ FQVPPT+ SF+S +V+                              LQE G+ +++AL+ Y+ +  + ++++L+E +L D   D A L D +   LG  +   +A++ GVF  D +D DED    +VP+LYV DT +G                 +TVA+L   E VYVW+G  AD   + ++ +   E  +       R  V+K V  G+EPL F+A FQ WDD      K + DVYEQR+ Q +    LGD   LRGRVLGD+EA  YW  +
Sbjct:  701 FKAFQVPPTMASFSSKNVYAM----------------------------LQEEGSGMMLALLRYHGLSFNVDLTVLDEQQLLDPEADQAGLEDMIEHALGQSMGEQYADYRGVFPPD-YDVDEDPFGDLVPRLYVLDTRSG-----------------QTVAILTAPEAVYVWKGPKADEKHYNVLFQP-PEVAKTAAAAARRYSVVKAVLGGKEPLEFKAHFQCWDDAPE---KAYVDVYEQRLAQRANTNQLGDAQHLRGRVLGDDEAKHYWSAK 927

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig8805.16992.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig8805.16992.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
Villin	3.190e-296	96.63	n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8...	[more]
Uncharacterized	1.280e-289	96.25	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
PH	2.270e-31	34.66	domain-containing protein n=1 Tax=Tribonema minus ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10		coord: 1..102 e-value: 9.1E-6 score: 27.6
IPR029006	ADF-H/Gelsolin-like domain superfamily	GENE3D	3.40.20.10		coord: 123..235 e-value: 3.1E-16 score: 61.1
IPR007122	Villin/Gelsolin	PANTHER	PTHR11977	VILLIN	coord: 7..226
None	No IPR available	PANTHER	PTHR11977:SF55	GELSOLIN	coord: 7..226
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 118..229
None	No IPR available	SUPERFAMILY	55753	Actin depolymerizing proteins	coord: 4..71

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig8805	contig	Ecto-sp9_F_contig8805:757..5693 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig8805.16992.1	mRNA_Ecto-sp9_F_contig8805.16992.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig8805 757..5693 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig8805.16992.1 ID=prot_Ecto-sp9_F_contig8805.16992.1|Name=mRNA_Ecto-sp9_F_contig8805.16992.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=445bp
EGEFQTFQVPPTVGSFNSMDVFVCICTVVTDDWVGNNDEAVFFWVGRHAT
LALQEHGAKVLMALMEYYCMPADFNVSILEEDELYDDHAQLWDDLSEMLG
GEVAWANWNGVFDEDEFDADEDLGVVPKLYVADTGTGNVVLTHVGHVQRE
CLLSETVAVLDTVEGVYVWRGLHADSSQFALICRACGEYCRNKPLPVGRK
VIKVREGQEPLVFRARFQSWDDGGSGEAKKFQDVYEQRVVQMSKEGTLGD
MSALRGRVLGDEEAAQYWEERGAAPGGQGVRSGVFRDDPASRSTQRRGAP
GRKAWVKPPPKPVVVDKTKELDARRNFLALKDRFEGSGGSSAEAFNKPTT
RTFSRRSLLEARQESIKLGTSTKFKEADQQQNNRGLAATGRRQSWQPQSQ
PGQQEGEDDDPWANQGEPAEVDPHVFLSRHSWGSASSARRRHNAV

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR029006	ADF-H/Gelsolin-like_dom_sf
IPR007122	Villin/Gelsolin