prot_Ecto-sp9_F_contig8802.16989.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8802.16989.1
Unique Nameprot_Ecto-sp9_F_contig8802.16989.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length208
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8802.16989.1 vs.
Match: Histone (acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4V8_9PHAE)

HSP 1 Score: 170 bits (431), Expect = 2.820e-45
Identity = 131/150 (87.33%), Postives = 132/150 (88.00%), Query Frame = 0 
Query:   59 GSPPPLTLDPPHPSAANGAAASVSVLNPASXXXXXXXXXXXXXEQAVKAAAGGSARPASSMSLPWITAPGXXXXXXXXXXXXXXXXXEDQQQNQRAGLIRAMSVDSAPSPARPHARSLSFTGSGGGASDGLGGGLGQASSGSEAFGINVN 208
            GSPPPLTL+PPHPSAANGAAA VSVLNPAS XXXXXXXXXXXX QA  AAAGGSARPASS SLPWITAPG XXXXXXXXXXXXXXXX DQQQNQRAGLIRAMSVDSAPSPARPHARSLSFTG          GGLGQASSGSEAFGINVN
Sbjct: 2102 GSPPPLTLEPPHPSAANGAAAIVSVLNPASAXXXXXXXXXXXXXQAANAAAGGSARPASSKSLPWITAPGAXXXXXXXXXXXXXXXXXDQQQNQRAGLIRAMSVDSAPSPARPHARSLSFTG----------GGLGQASSGSEAFGINVN 2241
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BLAST of mRNA_Ecto-sp9_F_contig8802.16989.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK58_ECTSI)

HSP 1 Score: 142 bits (358), Expect = 1.540e-35
Identity = 89/99 (89.90%), Postives = 90/99 (90.91%), Query Frame = 0 
Query:  110 GGSARPASSMSLPWITAPGXXXXXXXXXXXXXXXXXEDQQQNQRAGLIRAMSVDSAPSPARPHARSLSFTGSGGGASDGLGGGLGQASSGSEAFGINVN 208
            GGSARPASSMSLPWITAPG XXXXXXXXX       EDQQQNQRAGLIRAMSVDSAPSPARPHARSLSFTGSGGGASDGLGGGLGQASSGSEAFGI +N
Sbjct:  330 GGSARPASSMSLPWITAPGAXXXXXXXXXLTEERMPEDQQQNQRAGLIRAMSVDSAPSPARPHARSLSFTGSGGGASDGLGGGLGQASSGSEAFGIKMN 428
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8802.16989.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Histone2.820e-4587.33acetyltransferase n=1 Tax=Ectocarpus sp. CCAP 1310... [more]
Uncharacterized1.540e-3589.90protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..29
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 30..208
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8802contigEcto-sp9_F_contig8802:1412..2035 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8802.16989.1mRNA_Ecto-sp9_F_contig8802.16989.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8802 1412..2035 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8802.16989.1 ID=prot_Ecto-sp9_F_contig8802.16989.1|Name=mRNA_Ecto-sp9_F_contig8802.16989.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=208bp
LTATPAAAAAAATAASANPSEASAPAAVAAAVAVAPVPQAPGPTTPGSEA
GGGIARGSGSPPPLTLDPPHPSAANGAAASVSVLNPASAAGATAASTTPT
PEQAVKAAAGGSARPASSMSLPWITAPGATATAATARPLAEEPMPEDQQQ
NQRAGLIRAMSVDSAPSPARPHARSLSFTGSGGGASDGLGGGLGQASSGS
EAFGINVN
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