prot_Ecto-sp9_F_contig8801.16988.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig8801.16988.1
Unique Name	prot_Ecto-sp9_F_contig8801.16988.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	450

Homology

[Close]

BLAST of mRNA_Ecto-sp9_F_contig8801.16988.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXI9_ECTSI)

HSP 1 Score: 654 bits (1686), Expect = 4.470e-222
Identity = 415/453 (91.61%), Postives = 423/453 (93.38%), Query Frame = 0

Query:    1 MMVLAEEDDLVARTAXXXXXXXXXXRTECFEPSLLPASPDGGDIWGGPLEPSALGGLPILVLCVLGLVSVAWTAFGAATSSGREPNSKKEARVVPPSRSGERNASAPKPXXXXXXXXXXXXXXXP-SGGLTAVEPPGSAEATLPARGDDNHGIFDEGEHSAKVSSSFGRRLSRPDSTAAG-GDRARMEPGGSAGNGGVGMFFNGSAGREGGARVGVDSLGGGVGAAGRGRRPSVSGCLADDGXXXXXXGSSTCGENEWGPDGWKEGEDFWRTSSFASSSVADASLLEDAAAAADRDGAAAAA-RWAEAKATHDGVGLVAAADSKLEQRHATGTTEPRSPAGAEVAAAGKRNEGKPGGXXXXXXXXXXXXXXXXXXXRLMATVRGLLVELEEDLDTARVLLPECNRFRKVVRCVAESAMGLIEALREATEFSRTLSSPEAFLVVMAELLLDGFE 450
            MMVLAEED+LVARTA    XXXXX RTECFEP+LLPASPDGGDIWGGPLEPSALGGLPILVLCVLGLVSVAWTAFGAATSSGREPNS KEARVVPPSRSGER+ASAP  XXXXXXXXXXXXXXXP SGGLTAVEPPGSAEAT PARGDDNHGIFDEGEHSAKVSSSFGRRLSRPDSTAAG GDRARMEPGGSAGNGGVGMFFNGS GREGGARVGVDSLGG VGAAGRGRRPSVSG L DDGXXXXX  SSTCGEN W PDGW+EGED WRTSSFASSSVADASLLEDAAAAADRDG      R AEAKATHDGVGLVAAADSKLEQRHATGTTEPRSPAGAEVAAAGK+NEGKPGGXXXXXXXXXXXXXXXXXX R +ATVRGLLVELEEDLD ARVLLPECNRFRKVVRCVAESAMGLIEALREATEFSRTLSSPEAFLV+MAELL+DGFE
Sbjct:    1 MMVLAEEDNLVARTAACGSXXXXXGRTECFEPALLPASPDGGDIWGGPLEPSALGGLPILVLCVLGLVSVAWTAFGAATSSGREPNSNKEARVVPPSRSGERSASAPXXXXXXXXXXXXXXXXXPPSGGLTAVEPPGSAEATPPARGDDNHGIFDEGEHSAKVSSSFGRRLSRPDSTAAGCGDRARMEPGGSAGNGGVGMFFNGSTGREGGARVGVDSLGGRVGAAGRGRRPSVSGILDDDGXXXXX--SSTCGENGWDPDGWREGEDSWRTSSFASSSVADASLLEDAAAAADRDGXXXXXXRRAEAKATHDGVGLVAAADSKLEQRHATGTTEPRSPAGAEVAAAGKKNEGKPGGXXXXXXXXXXXXXXXXXXRRFLATVRGLLVELEEDLDAARVLLPECNRFRKVVRCVAESAMGLIEALREATEFSRTLSSPEAFLVIMAELLMDGFE 451

[Close]

BLAST of mRNA_Ecto-sp9_F_contig8801.16988.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLQ0_9PHAE)

HSP 1 Score: 641 bits (1653), Expect = 1.750e-216
Identity = 404/461 (87.64%), Postives = 407/461 (88.29%), Query Frame = 0

Query:    1 MMVLAEEDDLVARTAXXXXXXXXXXRTECFEPSLLPASPDGGDIWGGPLEPSALGGLPILVLCVLGLVSVAWTAFGAATSSGREPNSKKEARVVPPSRSGERNASAPKPXXXXXXXXXXXXXXXPSGGLTAVEPPGSAEATLPARGDDNHGIFDEGEHSAKVSSSFGRRLSRPDSTAAGGDRARMEPGGSAGNGGVGMFFNGSAGREGGARVGVDSLGGGVGAAGRGRRPSVSGCLADDGXXXXXXGSSTCGENEWGPDGWKEGEDFWRTSSFASSSVADASLLEDAAAAADRDGAAAAARWAEAKATHDGVGLVAAADSKLEQRHATGTTEPRSPAGAEVAAAGKRNEGKPGGXXXXXXXXXXXXXXXXXXXRLMATVRGLLVELEEDLDTARVLLPECNRFRKVVRCVAES-----------AMGLIEALREATEFSRTLSSPEAFLVVMAELLLDGFE 450
            MMVLAEE DLVARTA     XXXX R ECFEPSLLPASPDGGDIWGGPLEPSALGGLPILVLCVLGLVSVAWTAFGAATSSGRE NS KEARVVPPSRSGERNAS PK  XXXXXXXXXXXXXXPSGGLTAV+PPGSAEAT PAR DDNHGIFDEGEHSAKVSSSFGR LSRPDS A GGDRARMEPGGSAGNGGVGMFFNGSAGREGGAR GVDSLGGGVGAAGRGRRPSVSGCLADDG       SSTCGEN W PDGWKEGED WRTSSFASSSVADASLLEDAAAAAD DGAAAAAR  EAKATHDGVGLVAAADSKLEQR A GTTEP SPAG EVAA GK+N GKPG XXXXXXXXXXXXXXXXXX R +ATVR LLVELEEDLD ARVLLPECNRFRKVVRCVAES           AMGLIEALREATEFSRTLSSPEAFLVVMAELLLDGFE
Sbjct:   31 MMVLAEEGDLVARTAACGSGXXXXGRIECFEPSLLPASPDGGDIWGGPLEPSALGGLPILVLCVLGLVSVAWTAFGAATSSGRESNSNKEARVVPPSRSGERNASTPK--XXXXXXXXXXXXXXPSGGLTAVKPPGSAEATTPARSDDNHGIFDEGEHSAKVSSSFGRPLSRPDSAAVGGDRARMEPGGSAGNGGVGMFFNGSAGREGGARFGVDSLGGGVGAAGRGRRPSVSGCLADDGGGDGD--SSTCGENGWDPDGWKEGEDSWRTSSFASSSVADASLLEDAAAAADTDGAAAAARRVEAKATHDGVGLVAAADSKLEQRPAAGTTEPTSPAGEEVAAVGKKNAGKPGXXXXXXXXXXXXXXXXXXXRRFLATVRELLVELEEDLDAARVLLPECNRFRKVVRCVAESVGPGMDARPRQAMGLIEALREATEFSRTLSSPEAFLVVMAELLLDGFE 487

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig8801.16988.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig8801.16988.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
Uncharacterized	4.470e-222	91.61	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Uncharacterized	1.750e-216	87.64	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 358..381
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 80..450
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..56
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 57..79

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig8801	contig	Ecto-sp9_F_contig8801:318..2727 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig8801.16988.1	mRNA_Ecto-sp9_F_contig8801.16988.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig8801 318..2727 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig8801.16988.1 ID=prot_Ecto-sp9_F_contig8801.16988.1|Name=mRNA_Ecto-sp9_F_contig8801.16988.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=450bp
MMVLAEEDDLVARTAACGSGGGGGGRTECFEPSLLPASPDGGDIWGGPLE
PSALGGLPILVLCVLGLVSVAWTAFGAATSSGREPNSKKEARVVPPSRSG
ERNASAPKPPAPALAPSPPPPPSPPSGGLTAVEPPGSAEATLPARGDDNH
GIFDEGEHSAKVSSSFGRRLSRPDSTAAGGDRARMEPGGSAGNGGVGMFF
NGSAGREGGARVGVDSLGGGVGAAGRGRRPSVSGCLADDGDGDGDGGSST
CGENEWGPDGWKEGEDFWRTSSFASSSVADASLLEDAAAAADRDGAAAAA
RWAEAKATHDGVGLVAAADSKLEQRHATGTTEPRSPAGAEVAAAGKRNEG
KPGGGARALAAEREEQEKEEEERRLMATVRGLLVELEEDLDTARVLLPEC
NRFRKVVRCVAESAMGLIEALREATEFSRTLSSPEAFLVVMAELLLDGFE