prot_Ecto-sp9_F_contig88.16981.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig88.16981.1
Unique Nameprot_Ecto-sp9_F_contig88.16981.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length864
Homology
BLAST of mRNA_Ecto-sp9_F_contig88.16981.1 vs.
Match: PINc (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRN9_9PHAE)

HSP 1 Score: 1058 bits (2737), Expect = 0.000e+0
Identity = 684/873 (78.35%), Postives = 699/873 (80.07%), Query Frame = 0
Query:    1 MYSAHIAQESCGYQGHCSSGALADTTNLSSAPLQNANGDSRKQQYYSSGNANSPAPYPPXXXXXXAALDSVCLPLPPQQFAQPCYNYSTPPXXXXXXXXXXAEAIAPTSLNGAYGQAAVNAPLPPPGPPVLPQLVADYPSPEAAMQALQRQSMSPXXXXXXXXXXXXXXXXXXXXFEAPALRQLGTEYHSTSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHLESGANSSKAAGSSGGESFSGNSTDSDGLTKKRLPARQQRAAPSRKEGVEGHYTXXXXXXXXXXVGTRPRDPRKTKSQRAGXXXXXXXXXXXX----------KDAYKIPKKSGXXXXXXXXXXXXXXXXXXXXXXTTIVYSKSEMRMYGDTQRSSERTDPRESRSGDANDFRRSDGSGGRVGAGERPPEKDDRRFSSRDNNCSRDGRNDRDKDRRYASGGGDHKDGSRRQARDDGAGRRSNDGSGRYGRSREHEENNRRGSGRDRQKQRAGKSCPPPSAEKRRDASAGVRATTALMSPEQERDDEIAELASQLTALEIDAGKGSVADESKEKAADGGDAGKGKAYLSLEEYKEAAASGEIRPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLAMPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDESTRSSAQKANRYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRPEGLGGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPYPFSSGY 863
            MYSAH AQESCG+QGHCSSGALADTTNLSSAPLQNANGDSRKQQYYSSGNANSPAPYPP      AALD++CLPLPPQQFAQPCY+YSTPPXXXXXXXXX AEA APTSLNGAYGQAAV+APLPPPGPPVLPQLVADYPSPEAAMQALQRQSMSPXXXXXXXXXXXXXXXX    FEAPALRQLG EYH   XXXXXXXXX                                             HLESGANSSKAAGSSGGESFSGNS  SDG  KK LPAR                 XXXXXXXXXX  TRPRDPRK KSQRAG   XXXXXXXXX          KDAYKIPKKS XXXXXXXXXXXXXXXXXXX     I YSKS++RMYGDTQRSSERT PRE RSGDAN F RSDGSGGRV AGERP EKDDRR  SR +NCSRDGRNDRDK RRYAS  GDH DG  RQ RDDGAGRRSNDGSGRYGRSREHEE                                             ERDDEIAELASQLTALE+DAGKGSVAD+ KEK ADG DAGKGKAYLSL+EYKEA ASGEI+PYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLA+PTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDE+TRSSAQKANRYFRGLVEKPLERGREFPVVRVQ+DTELFRDNGHHSRPEGLGGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRP PFS GY
Sbjct:    1 MYSAHPAQESCGFQGHCSSGALADTTNLSSAPLQNANGDSRKQQYYSSGNANSPAPYPPLPPAAPAALDAICLPLPPQQFAQPCYDYSTPPXXXXXXXXXRAEAFAPTSLNGAYGQAAVDAPLPPPGPPVLPQLVADYPSPEAAMQALQRQSMSPXXXXXXXXXXXXXXXXQPQ-FEAPALRQLGMEYHXXXXXXXXXXXXADEHWLPSPPPPQCWQGPPGPPASVMLPIRAGTQEAASPASPQQQHLESGANSSKAAGSSGGESFSGNSAGSDGRRKKSLPARXXXXXXXXXXXXXXXXXXXXXXXXXXXXETRPRDPRKAKSQRAGAVGXXXXXXXXXXXXXXXXXXXKDAYKIPKKSXXXXXXXXXXXXXXXXXXXXPQPK-IFYSKSDLRMYGDTQRSSERTVPRECRSGDANHFHRSDGSGGRVSAGERPSEKDDRRSPSRGSNCSRDGRNDRDKGRRYASDSGDHTDGFHRQVRDDGAGRRSNDGSGRYGRSREHEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERDDEIAELASQLTALELDAGKGSVADKGKEKVADGDDAGKGKAYLSLKEYKEATASGEIKPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLAVPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQDDTELFRDNGHHSRPEGLGGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGY 871          
BLAST of mRNA_Ecto-sp9_F_contig88.16981.1 vs.
Match: PINc (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH7_ECTSI)

HSP 1 Score: 986 bits (2549), Expect = 0.000e+0
Identity = 569/617 (92.22%), Postives = 574/617 (93.03%), Query Frame = 0
Query:  247 HLESGANSSKAAGSSGGESFSGNSTDSDGLTKKRLPARQQRAAPSRKEGVEGHYTXXXXXXXXXXVGTRPRDPRKTKSQRAGXXXXXXXXXXXXKDAYKIPKKSGXXXXXXXXXXXXXXXXXXXXXXTTIVYSKSEMRMYGDTQRSSERTDPRESRSGDANDFRRSDGSGGRVGAGERPPEKDDRRFSSRDNNCSRDGRNDRDKDRRYASGGGDHKDGSRRQARDDGAGRRSNDGSGRYGRSREHEENNRRGSGRDRQKQRAGKSCPPPSAEKRRDASAGVRATTALMSPEQERDDEIAELASQLTALEIDAGKGSVADESKEKAADGGDAGKGKAYLSLEEYKEAAASGEIRPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLAMPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDESTRSSAQKANRYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRPEGLGGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPYPFSSGY 863
            HLESGANSSKAAG SGGESFSGNS DSDG  KK+LPARQQRAA            XXXXXXXXXXVGTRPRDPRK KSQRAG            KDAYKIPK SG XXXXXXXXXXXXXXXXXXXX T IVYSKSE+RMYGD QRSSERTDPRESRSGDANDFRRSDGSGGRVGAGERPPEKDDRRFSSRDNNCSRDGRNDRDKDRRYASGGGDHKDGSRRQARDDGAGR SNDGS RYGRSREHEENNRRGSGRDRQKQRAGKSCPPPSAEKRRDASAG RATTALMSPEQERDDEIAELASQLTALEIDAGKGSV DE KEK A+GGDAGKGKAYLSLEEYKEA ASGEI+PYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLAMPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDE+TRSSAQKANRYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRPEGLGGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRP PFS GY
Sbjct:   21 HLESGANSSKAAGYSGGESFSGNSADSDGQRKKKLPARQQRAAXXXXXXXXXXXXXXXXXXXXXXVGTRPRDPRKAKSQRAGAVGSSSSSS---KDAYKIPKNSGSXXXXXXXXXXXXXXXXXXXXQTKIVYSKSELRMYGDAQRSSERTDPRESRSGDANDFRRSDGSGGRVGAGERPPEKDDRRFSSRDNNCSRDGRNDRDKDRRYASGGGDHKDGSRRQARDDGAGRWSNDGSERYGRSREHEENNRRGSGRDRQKQRAGKSCPPPSAEKRRDASAGARATTALMSPEQERDDEIAELASQLTALEIDAGKGSVDDEGKEKVANGGDAGKGKAYLSLEEYKEATASGEIKPYKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLELMESRDKLATQRSQLLETKVEEIKKKKDTVSLAMPTAPVLVAFDTNWLIHRLADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDEATRSSAQKANRYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRPEGLGGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLCPAPPRPSPFSRGY 634          
BLAST of mRNA_Ecto-sp9_F_contig88.16981.1 vs.
Match: Hypothetical (protein n=2 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2XI71_9EUKA)

HSP 1 Score: 80.1 bits (196), Expect = 7.180e-13
Identity = 56/149 (37.58%), Postives = 71/149 (47.65%), Query Frame = 0
Query:  688 VLVAFDTNWLIHR--LADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDESTRSSAQKANRYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRPEGLGGDDSILNCCMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTT 834
            +L   DTNWLI    +A  +       G  K  +VLIP+AV  ELD     G  +S R     A R  R +  +   R   F  V  Q D E++ D GHH  P  L  DDSILNCC+FF++   +   V L T D N  IRA    + T
Sbjct:   99 MLFVIDTNWLIKEPEVARGLGDKIHALGLIKKVAVLIPRAVWRELD-----GLSKSARECKNNAQRAIRSIYNE-FGRQSSFRTVLGQMDHEIYTDKGHHINPRALKNDDSILNCCLFFSRNQGS--VVHLCTADKNLLIRAKVEQVQT 239          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig88.16981.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
PINc0.000e+078.35domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
PINc0.000e+092.22domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Hypothetical7.180e-1337.58protein n=2 Tax=Lotharella oceanica TaxID=641309 R... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.1010coord: 683..839
e-value: 3.7E-20
score: 74.3
NoneNo IPR availablePANTHERPTHR16161UNCHARACTERIZEDcoord: 458..835
IPR002716PIN domainPFAMPF13638PIN_4coord: 692..834
e-value: 5.3E-18
score: 65.6
IPR029060PIN-like domain superfamilySUPERFAMILY88723PIN domain-likecoord: 689..834

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig88contigEcto-sp9_F_contig88:30546..37184 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig88.16981.1mRNA_Ecto-sp9_F_contig88.16981.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig88 29612..37259 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig88.16981.1 ID=prot_Ecto-sp9_F_contig88.16981.1|Name=mRNA_Ecto-sp9_F_contig88.16981.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=864bp
MYSAHIAQESCGYQGHCSSGALADTTNLSSAPLQNANGDSRKQQYYSSGN
ANSPAPYPPFPPAAPAALDSVCLPLPPQQFAQPCYNYSTPPAPAPYPPLP
RAEAIAPTSLNGAYGQAAVNAPLPPPGPPVLPQLVADYPSPEAAMQALQR
QSMSPPPPPPQQQQQQQQQQQQQPPFEAPALRQLGTEYHSTSPPPPPTQP
PAGEHWLPSPPPPQWWQGPPGPPASVMLPFRGGTEEAASPASPQQQHLES
GANSSKAAGSSGGESFSGNSTDSDGLTKKRLPARQQRAAPSRKEGVEGHY
TPSVEGHYTPAVGTRPRDPRKTKSQRAGAVGSSGSSSSSSKDAYKIPKKS
GSSSRGQDSYTIPKKTGGTSRPQTTIVYSKSEMRMYGDTQRSSERTDPRE
SRSGDANDFRRSDGSGGRVGAGERPPEKDDRRFSSRDNNCSRDGRNDRDK
DRRYASGGGDHKDGSRRQARDDGAGRRSNDGSGRYGRSREHEENNRRGSG
RDRQKQRAGKSCPPPSAEKRRDASAGVRATTALMSPEQERDDEIAELASQ
LTALEIDAGKGSVADESKEKAADGGDAGKGKAYLSLEEYKEAAASGEIRP
YKGTKYQTVDDRYADGWAYNPTTRRWIKVACQEKKDAIEALPALLARLEL
MESRDKLATQRSQLLETKVEEIKKKKDTVSLAMPTAPVLVAFDTNWLIHR
LADTMCRVSDIAGRQKDTSVLIPKAVLTELDRLKTRGRDESTRSSAQKAN
RYFRGLVEKPLERGREFPVVRVQEDTELFRDNGHHSRPEGLGGDDSILNC
CMFFTQGIDTPRKVTLVTGDNNFAIRATAHGLTTTGRPQCDPGHCRMPLC
PAPPRPYPFSSGY*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002716PIN_dom
IPR029060PIN-like_dom_sf