prot_Ecto-sp9_F_contig88.16977.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig88.16977.1
Unique Name	prot_Ecto-sp9_F_contig88.16977.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	534

Homology

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BLAST of mRNA_Ecto-sp9_F_contig88.16977.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K070_9PHAE)

HSP 1 Score: 579 bits (1492), Expect = 6.130e-202
Identity = 401/504 (79.56%), Postives = 411/504 (81.55%), Query Frame = 0

Query:   35 LEWGRRYQEEELLALRLEVGEVSREVEAETKQLRDREEIIRAIRDEQRQDRIKIQTLLALSQPITPDITVVFQALAPD---PPLPPPSRGSRPLDRSSVPQNNRRAVTSNSPSRRSVAAAA-TAGTNAERGVSGEEDRRRGVFGDESLVECPRHVERRSIRQQEQRPRRRRYSNDGIGSDGGSGGEQISSEGERDTDGEYEEEEGGDDAGSDSHTREEEAIGGVSYGLHPGRRWTSERGEGNGGHADRR-GXXXXXXXXXXXXXXPRSGDGGGSLGTRKSREANRLRCTRGYQQHLERRLELTQRHLRELERLEGSYHETLTRDKQEREIHARVQKDNAAGVVEALGRRTAEVEKRLSGATDDYLRLRHKAKEAHAVSAEEQRQCGEARKKSQAEVRSFLAVAEAEVEAIKAEGGRRLEDCTAGLREKLGEAEEALQGERSHHAAIKQRFEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTELERRMFQAW 533
            L+WGRRYQEEELLALRLEVGEVS EVEAE KQLRDREEIIRAIRDEQRQDRIKIQTLLALSQPITPDITVVFQALAPD   PPLPPPSRG+RPLDRS VPQNNRRAV SNSPSRRSVAAAA TAG NA RG                                EQRPRRRRY NDGIGSDG SGGEQI+ EGER                 ++   EEEA GGVSYGL+PGRRWTSER  GNGGHADRR G              PRSGDGGGSLGTRKSREANRL CTRGYQQHLERRLEL +RHLRELERLEGSYHETLTRDKQEREIHARVQ+DNAA VVEAL RR AEVEKRLSGATDDYLRLRHKAKEAHAVSAEEQRQC EAR+KSQAEVRS LA AEA+VEA K EGGRRLEDCTAGLREKLGEAEEALQGERSHHAAIKQRFEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTELERRMFQAW
Sbjct:   13 LQWGRRYQEEELLALRLEVGEVSGEVEAEIKQLRDREEIIRAIRDEQRQDRIKIQTLLALSQPITPDITVVFQALAPDACPPPLPPPSRGARPLDRSYVPQNNRRAVASNSPSRRSVAAAAATAGRNAGRG--------------------------------EQRPRRRRYLNDGIGSDGCSGGEQINMEGER-----------------NAGRGEEEATGGVSYGLYPGRRWTSERVGGNGGHADRRRGGREGGVPGSRRRRRPRSGDGGGSLGTRKSREANRL-CTRGYQQHLERRLELNERHLRELERLEGSYHETLTRDKQEREIHARVQRDNAARVVEALERRNAEVEKRLSGATDDYLRLRHKAKEAHAVSAEEQRQCREAREKSQAEVRSLLAAAEAKVEATKVEGGRRLEDCTAGLREKLGEAEEALQGERSHHAAIKQRFEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTELERRMFQAW 466

[Close]

BLAST of mRNA_Ecto-sp9_F_contig88.16977.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLH3_ECTSI)

HSP 1 Score: 468 bits (1203), Expect = 1.090e-159
Identity = 349/536 (65.11%), Postives = 355/536 (66.23%), Query Frame = 0

Query:    1 MECYQEAMRAIERERINFLNKIDLVQPSFEEQHQLEWGRRYQEEELLALRLEVGEVSREVEAETKQLRDREEIIRAIRDEQRQDRIKIQTLLALSQPITPDITVVFQALAPD---PPLPPPSRGSRPLDRSSVPQNNRRAVTSNSPSRRSVAAAATAGTNAERGVSGEEDRRRGVFGDESLVECPRHVERRSIRQQEQRPRRRRYSNDGIGSDGGSGGEQISSEGERDTDGEYEEEEGGDDAGSDSHTREEEAIGGVSYGLHPGRRWTSERGEGNGGHADRRGXXXXXXXXXXXXXXPRSGDGGGSLGTRKSREANRLRCTRGYQQHLERRLELTQRHLRELERLEGSYHETLTRDKQEREIHARVQKDNAAGVVEALGRRTAEVEKRLSGATDDYLRLRHKAKEAHAVSAEEQRQCGEARKKSQAEVRSFLAVAEAEVEAIKAEGGRRLEDCTAGLREKLGEAEEALQGERSHHAAIKQRFEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTELERRMFQAW 533
            MECYQEAMRAIERERIN LNKIDLVQPSFEEQHQLEWGRRYQEEELLALRLEVGEVSREVEAETKQLRDREEIIRAIRDEQRQDRIKIQTLLALSQPITPDITVVFQALAPD   PPLPPPSRGSRPLDRSSVPQNNRRAVTSNSPSRRSVAAAATAGT+A RG                                                                                                                                                                            RHLRELERLEGS+HETLTRDKQERE+HARVQKDNAA V+EALGRRTAEVEKRLSGATDDYLRLRHKAKEAHAVSAE QRQCGEAR+KSQAEVRS +A AEAEVEAIKAEGGRRLEDCTAGLREKLGEAEEALQGERSHHAAIKQRFEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTELERRMFQAW
Sbjct:    1 MECYQEAMRAIERERINVLNKIDLVQPSFEEQHQLEWGRRYQEEELLALRLEVGEVSREVEAETKQLRDREEIIRAIRDEQRQDRIKIQTLLALSQPITPDITVVFQALAPDACPPPLPPPSRGSRPLDRSSVPQNNRRAVTSNSPSRRSVAAAATAGTSAGRG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------RHLRELERLEGSFHETLTRDKQEREMHARVQKDNAARVMEALGRRTAEVEKRLSGATDDYLRLRHKAKEAHAVSAEGQRQCGEAREKSQAEVRSLVAAAEAEVEAIKAEGGRRLEDCTAGLREKLGEAEEALQGERSHHAAIKQRFEEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTELERRMFQAW 364

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig88.16977.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig88.16977.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
Uncharacterized	6.130e-202	79.56	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	1.090e-159	65.11	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 322..342
None	No IPR available	COILS	Coil	Coil	coord: 1..21
None	No IPR available	COILS	Coil	Coil	coord: 508..528
IPR037696	Coiled-coil domain-containing protein 77	PANTHER	PTHR22091	UNCHARACTERIZED	coord: 2..109 coord: 318..531

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig88	contig	Ecto-sp9_F_contig88:3205..9158 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig88.16977.1	mRNA_Ecto-sp9_F_contig88.16977.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig88 3205..9158 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig88.16977.1 ID=prot_Ecto-sp9_F_contig88.16977.1|Name=mRNA_Ecto-sp9_F_contig88.16977.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=534bp
MECYQEAMRAIERERINFLNKIDLVQPSFEEQHQLEWGRRYQEEELLALR
LEVGEVSREVEAETKQLRDREEIIRAIRDEQRQDRIKIQTLLALSQPITP
DITVVFQALAPDPPLPPPSRGSRPLDRSSVPQNNRRAVTSNSPSRRSVAA
AATAGTNAERGVSGEEDRRRGVFGDESLVECPRHVERRSIRQQEQRPRRR
RYSNDGIGSDGGSGGEQISSEGERDTDGEYEEEEGGDDAGSDSHTREEEA
IGGVSYGLHPGRRWTSERGEGNGGHADRRGGGGGGGVPGRRRRRPRSGDG
GGSLGTRKSREANRLRCTRGYQQHLERRLELTQRHLRELERLEGSYHETL
TRDKQEREIHARVQKDNAAGVVEALGRRTAEVEKRLSGATDDYLRLRHKA
KEAHAVSAEEQRQCGEARKKSQAEVRSFLAVAEAEVEAIKAEGGRRLEDC
TAGLREKLGEAEEALQGERSHHAAIKQRFEERVGRARDGVLATRRRHHKL
VRRRAQEVVHLSDEMSALRRGVTELERRMFQAW*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR037696	CCDC77