prot_Ecto-sp9_F_contig8799.16976.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8799.16976.1
Unique Nameprot_Ecto-sp9_F_contig8799.16976.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length255
Homology
BLAST of mRNA_Ecto-sp9_F_contig8799.16976.1 vs.
Match: E3 (ubiquitin-protein ligase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP33_ECTSI)

HSP 1 Score: 420 bits (1080), Expect = 1.030e-141
Identity = 218/249 (87.55%), Postives = 225/249 (90.36%), Query Frame = 0
Query:    1 GFGLFFVFSVKQSPDRKMRNFRKSVAKPASIVNKRLSTLGSRSSTSHQDIELDASEEDLPADWVKKQRANGSIYYFHPLTGKKQSTPPDALGSARGGPQASGTVLTRVFKPAHASSGAGVSREHRQLSGGPLPPGWISRADDSGKTYYQDTVNKTTQWEMPTQRPRSNSVSSGRPEVIDMPMAHTHRGSNASSADNSRRSSXXXXXXXXXRRESAAGDPSPPPARGSIPAAPSYTTAVYLSNRSAQAAA 249
            GFGLFFV+SVKQSPDRKMRNFRKSV KPASIVNKRLSTLGSRSS S+QDIELDASEEDLPADWVKKQRANGSIYYFHPLTGKKQSTPPDALGSARGGPQASGT L R+F+PAHASSGAGVSREH QLSG PLPPGWISR DDSGKTY+QDTV+KTTQWE PTQ PRS+SVSSGRPEVIDMPMAHT RGSNASSADNSRRSS          RESAAGDPSPPPA GS PAAPSY TAVYLSNRSAQ AA
Sbjct:  335 GFGLFFVYSVKQSPDRKMRNFRKSVTKPASIVNKRLSTLGSRSSISNQDIELDASEEDLPADWVKKQRANGSIYYFHPLTGKKQSTPPDALGSARGGPQASGTALNRIFRPAHASSGAGVSREHGQLSGDPLPPGWISRTDDSGKTYFQDTVSKTTQWERPTQHPRSSSVSSGRPEVIDMPMAHTRRGSNASSADNSRRSSSSHAHDHPHGRESAAGDPSPPPAWGSFPAAPSYKTAVYLSNRSAQTAA 583          
BLAST of mRNA_Ecto-sp9_F_contig8799.16976.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZ12_9PHAE)

HSP 1 Score: 316 bits (809), Expect = 8.900e-101
Identity = 188/249 (75.50%), Postives = 200/249 (80.32%), Query Frame = 0
Query:    1 GFGLFFVFSVKQSPDRKMRNFRKSVAKPASIVNKRLSTLGSRSSTSHQDIELDASEEDLPADWVKKQRANGSIYYFHPLTGKKQSTPPDALGSARGGPQASGTVLTRVFKPAHASSGAGVSREHRQLSGGPLPPGWISRADDSGKTYYQDTVNKTTQWEMPTQRPRSNSVSSGRPEVIDMPMAHTHRGSNASSADNSRRSSXXXXXXXXXRRESAAGDPSPPPARGSIPAAPSYTTAVYLSNRSAQAAA 249
            GFGLFFVFSVKQSPDRKMRNFRKSV KPASIVNKRLSTLGSRSSTS+QDIELD+SEEDLPADWVKKQRANGSIYYFHPLTGKKQSTPPDALGSA GGPQASGTVL ++F   H S  A V  E   L     P G   R          DTVNKTTQWE PTQRPRS+SVSSGRP+V+DMP+AHT RGS+ SS +N     XXXXXXXXXRR+ AA DPSPPPA GSIPAAPSY TAV+LSNRSA  AA
Sbjct:  365 GFGLFFVFSVKQSPDRKMRNFRKSVTKPASIVNKRLSTLGSRSSTSNQDIELDSSEEDLPADWVKKQRANGSIYYFHPLTGKKQSTPPDALGSAGGGPQASGTVLNQIF---HVSQYALVRDERPTLFRHSPPMGEEIR----------DTVNKTTQWERPTQRPRSSSVSSGRPQVVDMPIAHTRRGSSTSSTNNPXXXXXXXXXXXXXRRDGAAEDPSPPPALGSIPAAPSYRTAVHLSNRSAHTAA 600          
BLAST of mRNA_Ecto-sp9_F_contig8799.16976.1 vs.
Match: Similar (to neural cell expressed, developmentally down-regulated 4-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP34_ECTSI)

HSP 1 Score: 230 bits (587), Expect = 6.330e-68
Identity = 147/260 (56.54%), Postives = 177/260 (68.08%), Query Frame = 0
Query:    1 GFGLFFVFSVKQSPDRKMRNFRKSVAKPASIVNKRLSTLGSRSSTSHQDIELDASEEDLPADWVKKQRANGSIYYFHPLTGKKQSTPPDALGSARGG-PQASGTVLTRVFKPAHASSGAGVSREHRQLSGGPLPPGWISRADDSGKTYYQDTVNKTTQWEMPTQRPRSNSVSSGRPEVIDMPMAHTHRGSNASSADNSRRSSXXXXXXXXXRRESAA------GDP----SPPPARGSIPAAPSYTTAVYLSNRSAQAAA 249
            GFGLFFVFS KQSPDRKMRNFRKS+ KPA   NKRLS L + S +S+QD+E+DASEEDLP +WVKKQR NGSIYYF+ +TG KQ+  P+ L +A G  P  S + L R+F+          +R  R  SG PLP GWI   D  GK YY DT+NKTTQWE P QR  S+     RP+ +D PM+ + R S+ASS DNS    XXXXXXXXX   +A+      G+P    +P P+RG+IPAAPSY TAVYLSNRS+ AAA
Sbjct:  329 GFGLFFVFSEKQSPDRKMRNFRKSIGKPAEFANKRLSILNTSSRSSNQDVEIDASEEDLPVEWVKKQRPNGSIYYFNVMTGAKQTASPNHLDNAGGSAPPPSNSALGRIFQG---------NRSARPNSG-PLPAGWIEGTDGDGKKYYLDTINKTTQWERPLQREHSSGGPDRRPQAVDAPMSQSRRYSHASS-DNSHXXXXXXXXXXXXXLAAASAASGVEGNPPAGGAPAPSRGAIPAAPSYRTAVYLSNRSSTAAA 577          
BLAST of mRNA_Ecto-sp9_F_contig8799.16976.1 vs.
Match: WW (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE8_9PHAE)

HSP 1 Score: 197 bits (501), Expect = 6.400e-55
Identity = 133/299 (44.48%), Postives = 164/299 (54.85%), Query Frame = 0
Query:    1 GFGLFFVFSVKQSPDRKMRNFRKSVAKPASIVNKRLSTLGS--RSSTSHQDIELDASEEDLPADWVKKQRANGSIYYFHPLTGKKQSTPPDALGSARGG-PQASGTVLTRVFKPA----------HAS-----------------SGAGVS---------REHRQLSGGPLPPGWISRADDSGKTYYQDTVNKTTQWEMPTQRPRSNSVSSGRPEVIDMPMAHTHRGSNASSADNSRRSSXXXXXXXXXRRESA-----------AGDPSPPPARGSIPAAPSYTTAVYLSNRSAQAAA 249
            GFGLFFVFS +QSPDR+ RNFRKS+ KPA     RLS+L    RSS  +QD+E+DAS EDLP +WVKKQR NGSIYYF+ +TG KQ+  P+ L  A G  P  S + L R+F+            H S                 S   V+             +L+ GPLP GW+     +GK YY DT+NKTTQWE P QR  S+     RP+ +D P++ +   S ASS  NS  S+            SA           AGD +P P+ G+IPAAPSY TAVYLSNRSA AAA
Sbjct:  380 GFGLFFVFSERQSPDRRFRNFRKSIRKPAEFAGNRLSSLNISFRSSNRNQDVEIDASGEDLPVEWVKKQRPNGSIYYFNVMTGAKQTASPNRLDDAGGAAPPPSNSALRRIFQVRKYILSTSFLFHLSCRNKERWTLSHLGSWDLSAPNVACFVLISLKGNRSARLNSGPLPAGWVEGTGGNGKNYYLDTINKTTQWERPLQREHSSGGPHRRPQAVDEPISQSRWYSQASSG-NSHHSTSSQAPHHRPSLVSASAASGVEDNPPAGD-APAPSLGAIPAAPSYRTAVYLSNRSATAAA 676          
BLAST of mRNA_Ecto-sp9_F_contig8799.16976.1 vs.
Match: WW (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI3_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 1.530e-23
Identity = 65/137 (47.45%), Postives = 86/137 (62.77%), Query Frame = 0
Query:    2 FGLFFVFSVKQSPDRKMRNFRKSVAKPASIVNKRLSTLGSRSSTSHQDIELDASEEDLPADWVKKQRANGSIYYFHPLTGK-KQSTPPDALGSARGG--PQASGTVLTRVFKPAHASSGAGVSREHRQLSGGPLPPG 135
            FGLFFVFS KQ PD+K+RNF+KSVAKPAS+V + LS+  SR  T   D+E+D S EDLP  WVK+QR NG+ YY++PLTG  ++++P +A      G  P      + R F+ AH    +  S  +R  S  P P G
Sbjct:  374 FGLFFVFSEKQLPDKKIRNFKKSVAKPASMVKRHLSSASSRDPTI-PDVEIDTSNEDLPIGWVKRQRKNGTTYYYNPLTGDARENSPTEAHAVVAVGVTPAPERRSIARAFRAAHNPGTSTSSSANRTRS--PHPTG 507          
BLAST of mRNA_Ecto-sp9_F_contig8799.16976.1 vs.
Match: WW (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQB8_ECTSI)

HSP 1 Score: 107 bits (268), Expect = 3.900e-23
Identity = 61/120 (50.83%), Postives = 82/120 (68.33%), Query Frame = 0
Query:    2 FGLFFVFSVKQSPDRKMRNFRKSVAKPASIVNKRLSTLGSRSSTSHQDIELDASEEDLPADWVKKQRANGSIYYFHPLTGK-KQSTPPDALGSARGG--PQASGTVLTRVFKPAHASSGA 118
            FGLFFVFS KQ PD+K+RNF+KSVAKPAS+VN+ LS+  SR  T+  D+E+DAS EDLP  WVK+QR NG+ YY++ LTG  ++++P +A      G  P      + R F+    +SGA
Sbjct:  343 FGLFFVFSEKQLPDKKIRNFKKSVAKPASMVNRHLSSANSRDPTT-PDVEIDASNEDLPIGWVKRQRKNGTTYYYNLLTGDARENSPTEAHAVVAVGVTPAPKRRSIARAFRIGLLTSGA 461          
BLAST of mRNA_Ecto-sp9_F_contig8799.16976.1 vs.
Match: HECT-type (E3 ubiquitin transferase n=3 Tax=Macrostomum lignano TaxID=282301 RepID=A0A1I8G7L2_9PLAT)

HSP 1 Score: 54.7 bits (130), Expect = 6.500e-5
Identity = 42/123 (34.15%), Postives = 56/123 (45.53%), Query Frame = 0
Query:   42 RSSTSHQDIELDASEEDLPADWVKKQRANGSIYYF-HPLTGKKQSTPPDALGSARGGPQASGTVLTRVFKPAHASSGAGVSREHRQLSGGPLPPGWISRADDSGKTYYQDTVNKTTQWEMPTQ 163
            RS+T+ + I  DA E  LPA W ++    G +YY  H         P + L  A+        V     +        G      QL  GPLPPGW  RAD SG+ YY +  +++TQWE P Q
Sbjct:  152 RSTTASEVISPDAGEA-LPAGWERRLDPQGRVYYVDHNTRTTTWQRPSNQLLHAQ-------AVYQTWLREQDYGQFQGRFVGDDQL--GPLPPGWERRADQSGRVYYVNHKDRSTQWEDPRQ 264          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8799.16976.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
E31.030e-14187.55ubiquitin-protein ligase, putative n=1 Tax=Ectocar... [more]
Uncharacterized8.900e-10175.50protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Similar6.330e-6856.54to neural cell expressed, developmentally down-reg... [more]
WW6.400e-5544.48domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
WW1.530e-2347.45domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
WW3.900e-2350.83domain-containing protein n=1 Tax=Ectocarpus silic... [more]
HECT-type6.500e-534.15E3 ubiquitin transferase n=3 Tax=Macrostomum ligna... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001202WW domainSMARTSM00456ww_5coord: 131..163
e-value: 3.3E-8
score: 43.3
coord: 58..90
e-value: 0.082
score: 22.0
IPR001202WW domainPFAMPF00397WWcoord: 132..161
e-value: 1.5E-8
score: 34.6
IPR001202WW domainPROSITEPS01159WW_DOMAIN_1coord: 136..161
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 130..163
score: 15.151
IPR001202WW domainPROSITEPS50020WW_DOMAIN_2coord: 57..90
score: 8.808
NoneNo IPR availableGENE3D2.20.70.10coord: 128..173
e-value: 1.0E-11
score: 46.3
coord: 54..96
e-value: 2.1E-5
score: 26.0
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 56..88
IPR036020WW domain superfamilySUPERFAMILY51045WW domaincoord: 127..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8799contigEcto-sp9_F_contig8799:312..3079 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8799.16976.1mRNA_Ecto-sp9_F_contig8799.16976.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8799 312..3079 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8799.16976.1 ID=prot_Ecto-sp9_F_contig8799.16976.1|Name=mRNA_Ecto-sp9_F_contig8799.16976.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=255bp
GFGLFFVFSVKQSPDRKMRNFRKSVAKPASIVNKRLSTLGSRSSTSHQDI
ELDASEEDLPADWVKKQRANGSIYYFHPLTGKKQSTPPDALGSARGGPQA
SGTVLTRVFKPAHASSGAGVSREHRQLSGGPLPPGWISRADDSGKTYYQD
TVNKTTQWEMPTQRPRSNSVSSGRPEVIDMPMAHTHRGSNASSADNSRRS
SSSHAHDHPHRRESAAGDPSPPPARGSIPAAPSYTTAVYLSNRSAQAAAP
AAAGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001202WW_dom
IPR036020WW_dom_sf