prot_Ecto-sp9_F_contig8780.16961.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8780.16961.1
Unique Nameprot_Ecto-sp9_F_contig8780.16961.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length929
Homology
BLAST of mRNA_Ecto-sp9_F_contig8780.16961.1 vs.
Match: Helicase (C-terminal domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUZ5_ECTSI)

HSP 1 Score: 1217 bits (3149), Expect = 0.000e+0
Identity = 758/937 (80.90%), Postives = 766/937 (81.75%), Query Frame = 0
Query:    1 MYEKQIFKDGLRRTVMGGTVKRKKNVRYFSRAELKQLFTLYPAGACRVLDQLNQMHGPLSGRLEAAESRAQRDISLDGHLDFVCGLRGAYGASAHGDGLPKIVQQPAAEGGSGIGGXXXXGWHTRNQIDEXXXXXXXXXXXXXXXXXXXXARGVRGGGMHGLLEEDLIALELDLDDGDDDR------GATMAPRPAGRKGKGPSRLLRRHQPSGMESSSSSDDVVEGGSRAVLDLSVAGADRSTAIALSGDSDSECEFGGGSKGHDVVELMDDDDHDDHEGRADGKVSVGLPRTPVAINDSGGACSSGSVEASREGLGTPESWSVSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCESSGSNSRPLWEWNDQEEMGYEEEKETMGGIEEPGDSASASSPFTSDRSIVGDFGGGMPPAFSGKEEEEGQASAAVRAGRERARRWPNDELGISPVASSSPSGRGXXXXXXSTVGDTAEEGETLRRASDASKKVSAARKRAREFAVEELGTEMEGDGRHRLSRSYSSGDDDDTKRCNPRDVQVEEEQQHGGYRSSDDSMDGGVEAVALYDGGGSDEGDGVDRSSTGGNAEDGCGAVEEETVRGGSFSSAIVMVDSSSSPARAAAPGEPTARANYSPGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGDQSPPNDPLLLATTTPNKGDGD-GGPTPVLDAAGRGGYGGAWPQSVRSSASSRSSYATAGSSHPQDVDRVAAVVAESRGDGSLGGHEXXXXXXXXXXRPKACFASPSSGGGGAERSPDGGAGCDKDQLSGSKGLQGAPAELSLAPPAPTSAPSSPAAAAADGAHFAPXXXXXXXXXXXXXXA--ESAGFTCRRCSCAAGAEAAEQAKGLLFEAWSNEREGDMYAAMGVCLEAIKLCDEDMELHKTISRIGSRMGCLS 928
            MYEKQIFKDGLRRTVMGGTVKRKKNVRYFSR+ELKQLFTLYPAGACRVLDQLNQMHGPLSGRLEAAESRAQRDISLDGHLDFVCGLRGAYGASAHGDGLPKIVQQPAAEG SGIGG    GWHTRNQIDE   XXX              ARG+RGGGMHGLLEEDLIALELDLDD           GATMAPRPAGRKGKGPSRLLRRHQPSG ESSSSSDDVVEGGSR VLDLSVAGADRSTAIALSGDSDSECEFGG SKGHDVVELMD         RADG+VSVGLPRTPVAINDSGGACSSGSVEASREGLGTPESWSVS     XXXXXXXXXXXXXXXXXXXXXXXXXCESSGSNSRPLWEWNDQEEMGYEEEKET+GGIEEPGDSASASSPFTS RSIVGDF GG  PAFS K+EEEG+ASAAVRAGRERARRW NDELG+SPVASSSPSGRGXXXXXXSTVGDTAEEGETLRRASDASKKVSAARKRAREFAVEELG EMEGDGRH LS SYSSGDDDDT+RCNPRDVQVEEEQQHGGYRSSDDSMDGGVEAVALYDGGGSDEGDGVDRSSTGGNAEDGCGA EEETVR GSFSSAI                            XXXXXXXXXXXXXX                             VGDQS PND LLLAT TPN GDGD GGPTP LDA GRGGYGGAWPQSVRSS SSRSSYATAGSSHPQDVD VAAV AESRGD SLGGHE          RPKACFASPSSGGGGAERSPDGGA CDK Q SGSKGLQ AP E S  PPAPTS                 XXXXXXXXX     A  ESAGFTCRRCSCAAGAEAAEQAKGLLFEAWSNEREGDMYAAMGVCLEAIKLCDEDMELHKTISRIGSRMGCLS
Sbjct:  112 MYEKQIFKDGLRRTVMGGTVKRKKNVRYFSRSELKQLFTLYPAGACRVLDQLNQMHGPLSGRLEAAESRAQRDISLDGHLDFVCGLRGAYGASAHGDGLPKIVQQPAAEGDSGIGGGGEGGWHTRNQIDEEEDXXXVEDSDGAGDG----ARGMRGGGMHGLLEEDLIALELDLDDXXXXXXXXXXGGATMAPRPAGRKGKGPSRLLRRHQPSGTESSSSSDDVVEGGSRPVLDLSVAGADRSTAIALSGDSDSECEFGGVSKGHDVVELMDXXXXXXXXXRADGEVSVGLPRTPVAINDSGGACSSGSVEASREGLGTPESWSVS---TPXXXXXXXXXXXXXXXXXXXXXXXXXCESSGSNSRPLWEWNDQEEMGYEEEKETVGGIEEPGDSASASSPFTSGRSIVGDFSGGTSPAFSAKKEEEGEASAAVRAGRERARRWANDELGVSPVASSSPSGRGXXXXXXSTVGDTAEEGETLRRASDASKKVSAARKRAREFAVEELGAEMEGDGRHGLSSSYSSGDDDDTERCNPRDVQVEEEQQHGGYRSSDDSMDGGVEAVALYDGGGSDEGDGVDRSSTGGNAEDGCGAEEEETVRDGSFSSAIXXXXXXX---------XXXXXXXXXXXXXXXXXXXXXXXXXXGRRWNDGNAAAPYCSSFPPLVGGEEGNEAVGDQSLPNDHLLLATPTPNNGDGDDGGPTPALDATGRGGYGGAWPQSVRSSVSSRSSYATAGSSHPQDVDGVAAVAAESRGDESLGGHERGDGDVGSSSRPKACFASPSSGGGGAERSPDGGAACDKGQRSGSKGLQEAPVEFSPVPPAPTSXXXXXXXXXXXXXXXXXXXXXXXXXXCAAHKAVAESAGFTCRRCSCAAGAEAAEQAKGLLFEAWSNEREGDMYAAMGVCLEAIKLCDEDMELHKTISRIGSRMGCLS 1032          
BLAST of mRNA_Ecto-sp9_F_contig8780.16961.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCL3_9PHAE)

HSP 1 Score: 981 bits (2535), Expect = 0.000e+0
Identity = 677/896 (75.56%), Postives = 689/896 (76.90%), Query Frame = 0
Query:   44 GACRVLDQLNQMHGPLSGRLEAAESRAQRDISLDGHLDFVCGLRGAYGASAHGDGLPKIVQQPAAEGGSGIGGXXXXGWHTRNQIDEXXXXXXXXXXXXXXXXXXXXARGVRGGGMHGLLEEDLIALELDLDDGDDDRG--ATMAPRPAGRKGKGPSRLLRRHQPSGMESSSSSDDVVEGGSRAVLDLSVAGADRSTAIALSGDSDSECEFGGGSKGHDVVELMDDDDHDDHE---GRADGKVSVGLPRTPVAINDSGGACSSGSVEASREGLGTPESWSVSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----CESSGSNSRPLWEWNDQEEMGYEEEKETMGGIEEPGDSASASSPFTSDRSIVGDFGGGMPPAFSGKEEEEGQASAAVRAGRERARRWPNDELGISPVASSSPSGRGXXXXXX-STVGDTAEEGETLRRASDASKKVSAARKRAREFAVEELGTEMEGDGRHRLSRSYSSGDDDDTKRCNPRDVQVEEEQQHGGYRSSDDSMDGGVEAVALYDGGGSDEGDGVDRSSTGGNAEDGCGAVEEETVRGGSFSSAIVMVDSSSSPARAAAPGEPTARANYSPGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGDQSPPNDPLLLATTTPNKGDGDGGPTPVLDAAGRGGYGGAWPQSVRSSASSRSSYATAGSSHPQDVDRVAAVVAESRGDGSLGGHEXXXXXXXXXXRPKACFASPSSGGGGAERSPDGGAGCDKDQLSGSKGLQGAPAELSLAPPAPTSAPSSPAAAAADGAHFAPXXXXXXXXXXXXXXAESAGFTCRRCSCAAGAEAAEQAKGLLFEAWSNEREGDMYAAMGVCLEAIKLCDEDMELHKTISRIGSRMGCLS 928
            GACRVLDQLNQMHGPLSGRLEAAESRAQRDISL+GHLDFVCGLRGAYGASAHGDGLPKIVQQPA EGGSGIGG    GWHTRNQIDEXXXXXXXXXXXXXXXX    ARG+RGGGMHGLLEEDLIALEL LDDGD      ATMAPR AGRKGKGPSRLLRRHQPSGMES           SR VLDLSVAGADRSTAIAL G+SDSECE+GG SKGHDVVELMDD          GRADGKVSVGLPRTPV INDSGGA  SGSVE SREGLGTPESWSVSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     CESSGSN +PLWEW DQEEMGYEEE+ET+GGIEEPGDSAS SSPFTS RSIVGDFGGGM PAF+ KEEEEG+ SAAVRAGRERARRW NDELGISPVASS      XXXXXX STVGD AEE +TL RASDASKKVS ARKRAREFAVE  G EM GD RHRLSRSYSSGD DDT+RCNPRDVQV EE+Q GGYRSSDDSMDGGVEAV LYDGG SDEGDGVDRSSTGGNAEDGCGA   E                                       XXXXXXX                                    VGDQSPP DPLLLAT T NKGDGDG PTPVLDAAGRG  GG WPQSVRSSASSRSSYATAGSSHPQDVD VAAVVAES GDGSL G  XXXXXXXXXX                            DQ SGSKGLQ APAELS  PPAPTSAPSSPAAAA DGAHFAPXXXXXXXXXX    AESAGFTCRRCSCAAGAEAAEQA GLLFEAWSNEREGDMYAAMGVCLEAIKLCDEDMELHKTISRIGSRMGCLS
Sbjct:    4 GACRVLDQLNQMHGPLSGRLEAAESRAQRDISLNGHLDFVCGLRGAYGASAHGDGLPKIVQQPATEGGSGIGGGGKGGWHTRNQIDEXXXXXXXXXXXXXXXX----ARGMRGGGMHGLLEEDLIALELGLDDGDXXXXXXATMAPRAAGRKGKGPSRLLRRHQPSGMESXXXXXXXXXXXSREVLDLSVAGADRSTAIALGGNSDSECEYGGRSKGHDVVELMDDXXXXXXXXXXGRADGKVSVGLPRTPVPINDSGGAYGSGSVETSREGLGTPESWSVSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCESSGSNCQPLWEWKDQEEMGYEEEEETIGGIEEPGDSASVSSPFTSGRSIVGDFGGGMSPAFA-KEEEEGEGSAAVRAGRERARRWANDELGISPVASSXXXXXXXXXXXXASTVGDPAEEDDTLWRASDASKKVSPARKRAREFAVEFFGAEMGGDDRHRLSRSYSSGDVDDTERCNPRDVQVGEEEQRGGYRSSDDSMDGGVEAVTLYDGGRSDEGDGVDRSSTGGNAEDGCGA---EXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRWNDGNAVAPYSSCFPPLVGGEKGSAGGGREEGSEAVGDQSPPKDPLLLATPTLNKGDGDGDPTPVLDAAGRGSNGGDWPQSVRSSASSRSSYATAGSSHPQDVDGVAAVVAESGGDGSLVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDQRSGSKGLQEAPAELSPVPPAPTSAPSSPAAAA-DGAHFAPXXXXXXXXXXHKAAAESAGFTCRRCSCAAGAEAAEQANGLLFEAWSNEREGDMYAAMGVCLEAIKLCDEDMELHKTISRIGSRMGCLS 890          
BLAST of mRNA_Ecto-sp9_F_contig8780.16961.1 vs.
Match: P-loop (containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB04_9STRA)

HSP 1 Score: 69.7 bits (169), Expect = 2.640e-8
Identity = 53/129 (41.09%), Postives = 64/129 (49.61%), Query Frame = 0
Query:    1 MYEKQIFKDGLRRTVM---GGTVKRKKNVRYFSRAELKQLFTLYPAGACRVLDQLNQMHGPLSGR---------------LEAAESRAQRDISL-DGHLDFVCGLR--GAYGASAHGDGLPKIVQQPAA 108
            MYEKQIFKDGLR TV+   GG+  R      FSRAELK LFTL P G  R+L QL + HGPL                  L A+E   QR+++   GH  ++  L+  G  G S HG         P A
Sbjct:  710 MYEKQIFKDGLRHTVLDNKGGSA-RGWGAGLFSRAELKDLFTLGPHGETRLLAQLEERHGPLPKSAHKRQIDCSFSLLHLLAASEHAFQRNLAQRGGHTAYLTSLKPLGVLGVSLHGSWANGAAHDPPA 837          
BLAST of mRNA_Ecto-sp9_F_contig8780.16961.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DY72_9STRA)

HSP 1 Score: 55.5 bits (132), Expect = 1.080e-5
Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 0
Query:    1 MYEKQIFKDGLRRTVMGGTVKRKKNV-RYFSRAELKQLFTLYPAGACRVLDQL 52
            MYE+QI KDGLRR V G   K  +NV RYF ++EL++LFTL PAG C V++++
Sbjct:   44 MYERQIHKDGLRRQVFG---KEGENVERYFQQSELRELFTLAPAGVCSVMEKV 93          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8780.16961.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Helicase0.000e+080.90C-terminal domain-containing protein n=1 Tax=Ectoc... [more]
Uncharacterized0.000e+075.56protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
P-loop2.640e-841.09containing nucleoside triphosphate hydrolase prote... [more]
Hypothetical1.080e-556.60protein (Fragment) n=1 Tax=Amphiprora paludosa Tax... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8780contigEcto-sp9_F_contig8780:1297..5553 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8780.16961.1mRNA_Ecto-sp9_F_contig8780.16961.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8780 1297..5583 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8780.16961.1 ID=prot_Ecto-sp9_F_contig8780.16961.1|Name=mRNA_Ecto-sp9_F_contig8780.16961.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=929bp
MYEKQIFKDGLRRTVMGGTVKRKKNVRYFSRAELKQLFTLYPAGACRVLD
QLNQMHGPLSGRLEAAESRAQRDISLDGHLDFVCGLRGAYGASAHGDGLP
KIVQQPAAEGGSGIGGGGEGGWHTRNQIDEEEDESDVEDSDGDGDGDGAG
ARGVRGGGMHGLLEEDLIALELDLDDGDDDRGATMAPRPAGRKGKGPSRL
LRRHQPSGMESSSSSDDVVEGGSRAVLDLSVAGADRSTAIALSGDSDSEC
EFGGGSKGHDVVELMDDDDHDDHEGRADGKVSVGLPRTPVAINDSGGACS
SGSVEASREGLGTPESWSVSPPPPGSPPPIGGGSAQNDSPMSAGGVGGGG
CESSGSNSRPLWEWNDQEEMGYEEEKETMGGIEEPGDSASASSPFTSDRS
IVGDFGGGMPPAFSGKEEEEGQASAAVRAGRERARRWPNDELGISPVASS
SPSGRGGGGGGGSTVGDTAEEGETLRRASDASKKVSAARKRAREFAVEEL
GTEMEGDGRHRLSRSYSSGDDDDTKRCNPRDVQVEEEQQHGGYRSSDDSM
DGGVEAVALYDGGGSDEGDGVDRSSTGGNAEDGCGAVEEETVRGGSFSSA
IVMVDSSSSPARAAAPGEPTARANYSPGTTTTTTSRRWNDGNAAAPYSSS
FPPLVGGEKRSAGGGREEGNEAVGDQSPPNDPLLLATTTPNKGDGDGGPT
PVLDAAGRGGYGGAWPQSVRSSASSRSSYATAGSSHPQDVDRVAAVVAES
RGDGSLGGHERGDGYVGSSSRPKACFASPSSGGGGAERSPDGGAGCDKDQ
LSGSKGLQGAPAELSLAPPAPTSAPSSPAAAAADGAHFAPPVATAAVCAA
HKAAAESAGFTCRRCSCAAGAEAAEQAKGLLFEAWSNEREGDMYAAMGVC
LEAIKLCDEDMELHKTISRIGSRMGCLS*
back to top