prot_Ecto-sp9_F_contig878.16960.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig878.16960.1
Unique Nameprot_Ecto-sp9_F_contig878.16960.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length219
Homology
BLAST of mRNA_Ecto-sp9_F_contig878.16960.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDV9_ECTSI)

HSP 1 Score: 417 bits (1072), Expect = 6.490e-146
Identity = 206/206 (100.00%), Postives = 206/206 (100.00%), Query Frame = 0
Query:    1 MRGGRTSDTVVLVEALVETALESGLIVGFVGAAEYLAARYLSDTKFSEVARLALWTAAVFVSGAATAGPKKWLEKSQLFNIDVPIGKDWYTNLRKPRWNPPNWVFPIMWIPLKILQVFACYEMWDKLETRSCVALPVVVYTVYKSLGDVWNKVFFERRRLKMGTVVISLYYLTLLAGIKVFFDVSDRAGYLFAPTAAWVTIATCLQ 206
            MRGGRTSDTVVLVEALVETALESGLIVGFVGAAEYLAARYLSDTKFSEVARLALWTAAVFVSGAATAGPKKWLEKSQLFNIDVPIGKDWYTNLRKPRWNPPNWVFPIMWIPLKILQVFACYEMWDKLETRSCVALPVVVYTVYKSLGDVWNKVFFERRRLKMGTVVISLYYLTLLAGIKVFFDVSDRAGYLFAPTAAWVTIATCLQ
Sbjct:   85 MRGGRTSDTVVLVEALVETALESGLIVGFVGAAEYLAARYLSDTKFSEVARLALWTAAVFVSGAATAGPKKWLEKSQLFNIDVPIGKDWYTNLRKPRWNPPNWVFPIMWIPLKILQVFACYEMWDKLETRSCVALPVVVYTVYKSLGDVWNKVFFERRRLKMGTVVISLYYLTLLAGIKVFFDVSDRAGYLFAPTAAWVTIATCLQ 290          
BLAST of mRNA_Ecto-sp9_F_contig878.16960.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVL6_THAPS)

HSP 1 Score: 128 bits (322), Expect = 1.750e-32
Identity = 82/226 (36.28%), Postives = 114/226 (50.44%), Query Frame = 0
Query:    1 MRGGRTSDTV------VLVEALVETALESGLIVGFVGAAEYLAARYLSDTKFSEVARLALWTAAVFVS---GAATAGPKKWLEKSQLFNIDVPIGKDWYTNLRKPRWNPPNWVFPIMWIPLKILQVFACYEMWDKLETRS--CVALPVVVYTVYKSLGDVWNKVFFERRRLKMGTVVISLYYLTLLAGIKVFFDVSDRAGYLFAPTAAWVTIATCLQWSTWLLNRD 215
            +RGG  SDT       VL  A VET L   L++  V           + + +S   R+A+  + +F S   G+          K  L   ++P   DWY+NL KPRWNPP W+FPIMW+ +     F    +W  + T S   +ALP +VY  + SLGD WNKVFF  + +  G  VI  ++  L +   +F +V   AG    PT  WVT+A  L WS +LLNR+
Sbjct:   87 IRGGACSDTTPTLFAKVLASAAVETFLMHQLLMFGVK----------TKSTYSTAIRIAVCFSVIFGSAYFGSLIDNGLSSATKQVLAPNEIPGDSDWYSNLAKPRWNPPGWLFPIMWLIISKPTQFVA--VWKLMATSSEKRLALPFLVYCAHLSLGDAWNKVFFGLQCIGRGMAVIFTFWSVLWSSAYLFREVDSSAGLFLLPTCLWVTVAAALNWSIFLLNRE 300          
BLAST of mRNA_Ecto-sp9_F_contig878.16960.1 vs.
Match: TspO/MBR (family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z2U8_9STRA)

HSP 1 Score: 125 bits (313), Expect = 1.820e-31
Identity = 71/198 (35.86%), Postives = 105/198 (53.03%), Query Frame = 0
Query:   22 ESGLIVGFVGAAEYLAARYLSDTKFSEVARLALWTAAVFVSGAATAGPKKWLEKSQL----FNIDVPIGKDWYTNLRKPRWNPPNWVFPIMWIPLKILQVFACYEMWDKLET-RSCVALPVVVYTVYKSLGDVWNKVFFERRRLKMGTVVISLYYLTLLAGIKVFFDVSDRAGYLFAPTAAWVTIATCLQWSTWLLNR 214
            E+GL++G +  A  LAAR+  D K+        W      S       +  L K QL     NID  + + WY  + KP+W P +WVFP +WIPLK++QV     +W  L+T R  +A P+V+Y ++ +LGD WN  FF  + +  G  +I  ++  LLA   +F+ +   AG    PT  WVTIAT L +S +  N+
Sbjct:   77 ETGLLLGVLQLARKLAARHPLDIKYMRAVDYTAWAVIALGSDWLVGVIRLLLVKLQLAKPRVNIDESL-RTWYRLIAKPKWTPADWVFPTVWIPLKLMQVLGARIIW--LQTGRDPLATPIVLYCLHAALGDNWNTAFFREQYITGGLSIIVQFFAALLATTYIFYQMDPVAGNFLLPTCVWVTIATTLNYSIYRRNK 271          
BLAST of mRNA_Ecto-sp9_F_contig878.16960.1 vs.
Match: Uncharacterized (protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1FSF7_EMIHU)

HSP 1 Score: 122 bits (305), Expect = 1.370e-30
Identity = 73/205 (35.61%), Postives = 107/205 (52.20%), Query Frame = 0
Query:   12 LVEALVETALESGLIVGFVGAAEYLAARYLSDTKFSEVARLALWTAAVFVSGAATAGPKKWLEKSQLFNIDVPIGKDWYTNLRKPRWNPPNWVFPIMWIPLKILQVFACYEMWDKLETRSCVALPVVVYTVYKSLGDVWNKVFFERRRLKMGTVVISLYYLTLLAGIKVFFDVSDRAGYLFAPTAAWVTIATCLQWSTWLLNRDT 216
            L+E     A+E+ L++ F+ AA  + +R   +     + +LA W   V V G++       L+     N    +  +WY  L KP WNPP W+FP+MWIP+K+ Q  A    W  L  R+  A PVV++ ++ SLGD+WN  FF ++R   G +VI  ++  L+A   +    S  AG L AP  AWV +A  L    W LNR T
Sbjct:   47 LLEVSKSAAMETILLLAFLRAAAEVVSRASGERSKFWIGQLA-WV--VVVQGSSR------LQGYMQSNTQT-LSPEWYDKLVKPNWNPPAWLFPVMWIPIKLAQTAAAGITWRALGHRTFSAAPVVMFLLHLSLGDIWNVQFFLKQRKLTGLLVIYTFWAALIASAVLIGRTSLLAGALVAPGVAWVAVAAALNLDIWYLNRHT 241          
BLAST of mRNA_Ecto-sp9_F_contig878.16960.1 vs.
Match: Probable (translocator protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9RG94_9CHLO)

HSP 1 Score: 120 bits (300), Expect = 1.680e-30
Identity = 58/133 (43.61%), Postives = 81/133 (60.90%), Query Frame = 0
Query:   87 KDWYTNLRKPRWNPPNWVFPIMWIPLKILQVFACYEMWDKLET-RSCVALPVVVYTVYKSLGDVWNKVFFERRRLKMGTVVISLYYLTLLAGIKVFFDVSDRAGYLFAPTAAWVTIATCLQWSTWLLNRDTKK 218
            K WY  LRKP WNPPNWVFP +WIPLKILQ  A + +W    + +  VA+P+ ++ V+  LG+ WN VFF RR +      +  ++L++ A    F+ V   AG L APT  WV+IA  L +  + LN+D +K
Sbjct:   49 KVWYPKLRKPSWNPPNWVFPAVWIPLKILQSAALWLVWKSAGSDKESVAVPLTIFGVHALLGNQWNVVFFGRRDMPGSLKWMGAFWLSVAATAYSFYSVEPLAGLLIAPTQVWVSIAAKLNYDIFQLNKDDEK 181          
BLAST of mRNA_Ecto-sp9_F_contig878.16960.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZHH7_CHLVA)

HSP 1 Score: 118 bits (295), Expect = 2.090e-30
Identity = 55/129 (42.64%), Postives = 73/129 (56.59%), Query Frame = 0
Query:   89 WYTNLRKPRWNPPNWVFPIMWIPLKILQVFACYEMWDKLETRSCVALPVVVYTVYKSLGDVWNKVFFERRRLKMGTVVISLYYLTLLAGIKVFFDVSDRAGYLFAPTAAWVTIATCLQWSTWLLNRDTK 217
            WY  L KP W PPNWVFP +WIPLK+LQ  A + +W    T   + LP+ ++  +  LG  WN VFF R +++     ++ ++ ++ A I  F  VS  AG LFAPT  WVTIA  L W    LN   K
Sbjct:    1 WYEALAKPAWTPPNWVFPAVWIPLKVLQSVAAWLVWRSAPTTQQLYLPLALFVAHLFLGSWWNVVFFGRHQMQQSVKWMAAFWCSIAASIAAFSQVSPLAGLLFAPTQLWVTIAAKLNWDIVKLNAAKK 129          
BLAST of mRNA_Ecto-sp9_F_contig878.16960.1 vs.
Match: Uncharacterized (protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0P621_9CHLO)

HSP 1 Score: 117 bits (292), Expect = 2.070e-29
Identity = 54/127 (42.52%), Postives = 76/127 (59.84%), Query Frame = 0
Query:   89 WYTNLRKPRWNPPNWVFPIMWIPLKILQVFACYEMWDKLETRSCVALPVVVYTVYKSLGDVWNKVFFERRRLKMGTVVISLYYLTLLAGIKVFFDVSDRAGYLFAPTAAWVTIATCLQWSTWLLNRD 215
            +Y  L KP WNPPNWVFP +WIPLK+LQ  + + +  +      +ALP+ ++  + +LG+ WN  FF +R+LK    V+  ++L++  GI  F  +S  A  LFAPT  WVTIA  L W    LN D
Sbjct:   45 YYKTLVKPSWNPPNWVFPAVWIPLKLLQSVSLWLVVKQAPDNKSLALPLALFGAHLALGNYWNYTFFGQRKLKESLNVMGAFWLSIAGGIASFHSISPAAALLFAPTEIWVTIAAKLNWDIVKLNAD 171          
BLAST of mRNA_Ecto-sp9_F_contig878.16960.1 vs.
Match: TspO/MBR-related (protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7ETG3_9STRA)

HSP 1 Score: 115 bits (289), Expect = 5.960e-29
Identity = 61/167 (36.53%), Postives = 91/167 (54.49%), Query Frame = 0
Query:   61 VSGAATAGPKKWLEKSQLFNIDVPIGKDWYTNLRKPRWNPPNWVFPIMWI----PLKILQVFACYEMWDKL-----ETRSCVALPVVVYTVYKSLGDVWNKVFFERRRLKMGTVVISLYYLTLLAGIKVFFDVSDRAGYLFAPTAAWVTIATCLQWSTWLLNRDTKK 218
            V G+ +A  K+ L  S++         +WY NL+KP WNPP W+FPIMW+    P ++  V    +  +        + +   L + VYT + +LGD WNKVFF    +  GTVVIS++   LLA   +F+ +   AGY   PT  WV++AT LQ+S +  N+ + K
Sbjct:   13 VDGSLSAATKQALNPSKVLG-----DPNWYANLKKPTWNPPGWIFPIMWLLISKPTQLCAVSRILKYGNGTGGAVTSSTTSHLLALFVYTTHLALGDAWNKVFFGLECIGRGTVVISIFLSFLLASTYLFYTIDPAAGYYMLPTCGWVSVATALQYSIYFKNKKSIK 174          
BLAST of mRNA_Ecto-sp9_F_contig878.16960.1 vs.
Match: Hypothetical (protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AEH1_9STRA)

HSP 1 Score: 120 bits (300), Expect = 6.610e-29
Identity = 58/136 (42.65%), Postives = 83/136 (61.03%), Query Frame = 0
Query:   88 DWYTNLRKPRWNPPNWVFPIMWI----PLKIL---QVFACYEMWDKLETRSCVAL-PVVVYTVYKSLGDVWNKVFFERRRLKMGTVVISLYYLTLLAGIKVFFDVSDRAGYLFAPTAAWVTIATCLQWSTWLLNRD 215
            +WY NL+KP WNPP W+FPIMW+    P ++    ++F     +D+    + V L P+ VYT   +LG+ WN VFF    +  GTVVI+ +Y  LLA   +F+ + D AGY   PT  WVT+AT LQ+S + LN++
Sbjct:  185 NWYANLKKPTWNPPGWLFPIMWLVVSKPTQLCATSRIFKYGLTFDEGGVVTAVPLVPLAVYTTMLALGNAWNNVFFGLECIGRGTVVITFFYAALLASAYLFYQIDDLAGYYMLPTCGWVTVATALQYSIYFLNKN 320          
BLAST of mRNA_Ecto-sp9_F_contig878.16960.1 vs.
Match: Uncharacterized (protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150H3I1_GONPE)

HSP 1 Score: 115 bits (287), Expect = 9.520e-29
Identity = 51/125 (40.80%), Postives = 74/125 (59.20%), Query Frame = 0
Query:   89 WYTNLRKPRWNPPNWVFPIMWIPLKILQVFACYEMWDKLETRSCVALPVVVYTVYKSLGDVWNKVFFERRRLKMGTVVISLYYLTLLAGIKVFFDVSDRAGYLFAPTAAWVTIATCLQWSTWLLN 213
            WY  L+KP+W PPN+VFP++WIPLK++Q  A + +W K  +   +A P+    V+  LG+ WN VFF +R+LK     +  ++ ++      F+ VS  A YL  PT  WV+IAT L W    LN
Sbjct:   42 WYKALKKPKWTPPNYVFPLVWIPLKLMQSVALWLVWTKAPSARALAFPLTAMAVHMGLGNWWNVVFFGQRKLKESLPWMYTFWASIAVTAAAFYPVSPAAAYLMVPTQIWVSIATKLNWDIVKLN 166          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig878.16960.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized6.490e-146100.00protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDV9... [more]
Uncharacterized1.750e-3236.28protein n=1 Tax=Thalassiosira pseudonana TaxID=351... [more]
TspO/MBR1.820e-3135.86family-domain-containing protein n=1 Tax=Tribonema... [more]
Uncharacterized1.370e-3035.61protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID... [more]
Probable1.680e-3043.61translocator protein n=1 Tax=Coccomyxa sp. Obi Tax... [more]
Uncharacterized2.090e-3042.64protein (Fragment) n=1 Tax=Chlorella variabilis Ta... [more]
Uncharacterized2.070e-2942.52protein n=1 Tax=Raphidocelis subcapitata TaxID=307... [more]
TspO/MBR-related5.960e-2936.53protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 ... [more]
Hypothetical6.610e-2942.65protein n=1 Tax=Pseudo-nitzschia australis TaxID=4... [more]
Uncharacterized9.520e-2940.80protein n=1 Tax=Gonium pectorale TaxID=33097 RepID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004307TspO/MBR-related proteinPFAMPF03073TspO_MBRcoord: 88..210
e-value: 7.4E-26
score: 90.8
IPR004307TspO/MBR-related proteinPANTHERPTHR10057PERIPHERAL-TYPE BENZODIAZEPINE RECEPTORcoord: 86..217
IPR038330TspO/MBR-related superfamilyGENE3D1.20.1260.100coord: 76..215
e-value: 4.1E-31
score: 109.6
NoneNo IPR availablePANTHERPTHR10057:SF0TRANSLOCATOR PROTEINcoord: 86..217
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 183..187
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 49..68
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 69..102
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 213..218
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 38..48
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 122..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 188..212
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..182
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..121
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..37
NoneNo IPR availableTMHMMTMhelixcoord: 190..212
NoneNo IPR availableTMHMMTMhelixcoord: 163..185

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig878contigEcto-sp9_F_contig878:24988..29055 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig878.16960.1mRNA_Ecto-sp9_F_contig878.16960.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig878 24221..29136 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig878.16960.1 ID=prot_Ecto-sp9_F_contig878.16960.1|Name=mRNA_Ecto-sp9_F_contig878.16960.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=219bp
MRGGRTSDTVVLVEALVETALESGLIVGFVGAAEYLAARYLSDTKFSEVA
RLALWTAAVFVSGAATAGPKKWLEKSQLFNIDVPIGKDWYTNLRKPRWNP
PNWVFPIMWIPLKILQVFACYEMWDKLETRSCVALPVVVYTVYKSLGDVW
NKVFFERRRLKMGTVVISLYYLTLLAGIKVFFDVSDRAGYLFAPTAAWVT
IATCLQWSTWLLNRDTKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004307TspO_MBR
IPR038330TspO/MBR-related_sf