prot_Ecto-sp9_F_contig8767.16944.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8767.16944.1
Unique Nameprot_Ecto-sp9_F_contig8767.16944.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length347
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8767.16944.1 vs.
Match: Heat (shock protein 70 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCN8_ECTSI)

HSP 1 Score: 644 bits (1661), Expect = 2.710e-226
Identity = 329/346 (95.09%), Postives = 330/346 (95.38%), Query Frame = 0 
Query:    1 AAVEDSSGPEVASDRALWRNLLDSAKLLRERLSADPKSSVSLKPGCCDADPAFKHSLEVKTVVLYGSCAKTPALLEEVVKMFLDAQIEHPGVGDCAKGAALLLAGSRGLLNALPVTGHDALSHKLGLVDRSKKGPEAVELFPTGSRVPSSITRQFSRKSAGSSGLAVDLEIVEWMEGDKSGEKGSPSSGGTWVTVQRLGNPLAMQDDRGYPVLAEEVTTLFSLDECGICVNEVESSVLPKKAGGPGSLRRLLNQALIISIVFGLFGGGYWLLYRLEHAGERRQASARIRLTKFYEQASSKSGSLRRFISHNPEKLSTVEDALARYKGREDILFQRLKKQYGKPIPA 346
            AAVEDSSGPEVASDRALWRNLLDSAKLLRERLSADPKSSVSLKPGCCDADPAFKHSLEVKTVVLYGSCAKTPALLEEVVKMFLDAQIEHPGVGDCAKGAALLLAGSRGLLNALPVTGHDALSHKLGLVDRSKKG EAVELFPTGSRVPSSITRQFSRKSAGSSGLAVDLEIVEWMEGDKSGE+GS SSGGTWVTVQRLGNPLAMQDDRGYPVLAEEVTTLFSLDECGICVNEVESSVLPKKAGGPGSLRRLLNQALIISIVFGLFGGGYWLLYRLEHAGERRQASARIRLT FYEQ             HNPEKLSTVEDALARYKGREDILFQRLKKQYGKPIPA
Sbjct:  430 AAVEDSSGPEVASDRALWRNLLDSAKLLRERLSADPKSSVSLKPGCCDADPAFKHSLEVKTVVLYGSCAKTPALLEEVVKMFLDAQIEHPGVGDCAKGAALLLAGSRGLLNALPVTGHDALSHKLGLVDRSKKGAEAVELFPTGSRVPSSITRQFSRKSAGSSGLAVDLEIVEWMEGDKSGERGSASSGGTWVTVQRLGNPLAMQDDRGYPVLAEEVTTLFSLDECGICVNEVESSVLPKKAGGPGSLRRLLNQALIISIVFGLFGGGYWLLYRLEHAGERRQASARIRLTNFYEQ-------------HNPEKLSTVEDALARYKGREDILFQRLKKQYGKPIPA 762
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8767.16944.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Heat2.710e-22695.09shock protein 70 n=1 Tax=Ectocarpus siliculosus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 273..346
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 251..272
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..250
NoneNo IPR availableTMHMMTMhelixcoord: 251..273

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8767contigEcto-sp9_F_contig8767:367..5263 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8767.16944.1mRNA_Ecto-sp9_F_contig8767.16944.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8767 367..5263 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8767.16944.1 ID=prot_Ecto-sp9_F_contig8767.16944.1|Name=mRNA_Ecto-sp9_F_contig8767.16944.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=347bp
AAVEDSSGPEVASDRALWRNLLDSAKLLRERLSADPKSSVSLKPGCCDAD
PAFKHSLEVKTVVLYGSCAKTPALLEEVVKMFLDAQIEHPGVGDCAKGAA
LLLAGSRGLLNALPVTGHDALSHKLGLVDRSKKGPEAVELFPTGSRVPSS
ITRQFSRKSAGSSGLAVDLEIVEWMEGDKSGEKGSPSSGGTWVTVQRLGN
PLAMQDDRGYPVLAEEVTTLFSLDECGICVNEVESSVLPKKAGGPGSLRR
LLNQALIISIVFGLFGGGYWLLYRLEHAGERRQASARIRLTKFYEQASSK
SGSLRRFISHNPEKLSTVEDALARYKGREDILFQRLKKQYGKPIPA*
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