prot_Ecto-sp9_F_contig8756.16938.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8756.16938.1
Unique Nameprot_Ecto-sp9_F_contig8756.16938.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length594
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8756.16938.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP19_ECTSI)

HSP 1 Score: 475 bits (1222), Expect = 9.940e-154
Identity = 376/427 (88.06%), Postives = 379/427 (88.76%), Query Frame = 0 
Query:    1 MAKPSDAGSLRAAGYRAVSRAVLQLGEGAAPYLATPALPAILAEVRAAVAASEPEXXXXXXXXXXXXXXXXXXXXXXXPGVXXXXXXSKKGMGIEPAMSARKSSQKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTGAAALAEEQAVCTGLSCLSRVVVCCKGHLPLGGRLAVEEVLHRGLELLAHAGAAAKGSRGNGXXXXXXXXXXXX--RRCARLEDPRVAREFLGLAHACLMTPLADGTRSGSLSVAIAAFRSFASHPDQRLAVASQQALAGCGAVLYPRAAPLHLPHAVTSQARAWGGSSASSTGRGLPMGWGDTLMVAEVESAEEESQEDLEDYQHPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEEGGRFPQTVPRDASSTS 425
            MAKPSDAGSLRAAGYRAVSRAVLQLGEGAAPYLATPALPAILAEVR+AVAASEPE XXXXXXXXXXX           PGV      SKKGMGIEPAMSARKSSQK      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTGAAALAEEQAVC GLSCLSRVVVCCKGHLPLGGRLAVEEVLHRGLELL+HAG AAKGSRG+GXXXXXXXXXXXX  RRCARLEDPRVAREFLGLAHACLMTPLADGTRSGSLSVAIAAFRSFASHPDQRLA ASQQALAGCGAVLYPRAAPLHLPHAVTSQARAWGGSSASSTGRGLPMGWGDTLMVAE ESAEEESQEDLEDYQHPGRGXXXXXXXXX               XXXXXXXXXXXXXXXXXXXXX   EEGGRFPQTVPRDASSTS
Sbjct:  409 MAKPSDAGSLRAAGYRAVSRAVLQLGEGAAPYLATPALPAILAEVRSAVAASEPEAXXXXXXXXXXXSVEFVAATGA-PGVAAVGGGSKKGMGIEPAMSARKSSQK------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTGAAALAEEQAVCAGLSCLSRVVVCCKGHLPLGGRLAVEEVLHRGLELLSHAGGAAKGSRGDGXXXXXXXXXXXXXXRRCARLEDPRVAREFLGLAHACLMTPLADGTRSGSLSVAIAAFRSFASHPDQRLAAASQQALAGCGAVLYPRAAPLHLPHAVTSQARAWGGSSASSTGRGLPMGWGDTLMVAEGESAEEESQEDLEDYQHPGRGXXXXXXXXXALTVRAAGLAAEGLTXXXXXXXXXXXXXXXXXXXXXAALEEGGRFPQTVPRDASSTS 828
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BLAST of mRNA_Ecto-sp9_F_contig8756.16938.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJU2_9PHAE)

HSP 1 Score: 396 bits (1018), Expect = 5.480e-123
Identity = 280/425 (65.88%), Postives = 286/425 (67.29%), Query Frame = 0 
Query:    1 MAKPSDAGSLRAAGYRAVSRAVLQLGEGAAPYLATPALPAILAEVRAAVAASEPEXXXXXXXXXXXXXXXXXXXXXXXPGVXXXXXXSKKGMGIEPAMSARKSSQKKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTGAAALAEEQAVCTGLSCLSRVVVCCKGHLPLGGRLAVEEVLHRGLELLAHAGAAAKGSRGNGXXXXXXXXXXXXRRCARLEDPRVAREFLGLAHACLMTPLADGTRSGSLSVAIAAFRSFASHPDQRLAVASQQALAGCGAVLYPRAAPLHLPHAVTSQARAWGGSSASSTGRGLPMGWGDTLMVAEVESAEEESQEDLEDYQHPGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPEEGGR-FPQTVPRDASST 424
            M KPSDAGSLRAAGYRAVSRAVLQLGEGAAPYLATPALPAILAEVRAAVAASEPEXXXXXXXXXXXXXXXX                                                                                   AL+EEQAVC GLSCLSRVVVCCKGHLPLGGRLAVEEVLHRGLELL+HA  AAKGSRGN XXXXXX      RRCA LEDPRVAREF GLAHACLMTPLADGTRSGSLSVAIAAFRS ASH D+RLA ASQQALAGCGA+LYPRAAPLHLPHAVTSQARAWGGSSASSTGRGLPMGWGDTLMVAE ESAEEES+EDL+DYQHPGRGXXXXXXXX                             XXXX        EGG  FPQTVPRDASST
Sbjct:  499 MGKPSDAGSLRAAGYRAVSRAVLQLGEGAAPYLATPALPAILAEVRAAVAASEPEXXXXXXXXXXXXXXXX-----------------------------------------------------------------------------------ALSEEQAVCAGLSCLSRVVVCCKGHLPLGGRLAVEEVLHRGLELLSHAAGAAKGSRGNXXXXXXXGASGEGRRCAPLEDPRVAREFFGLAHACLMTPLADGTRSGSLSVAIAAFRSLASHSDERLAAASQQALAGCGAILYPRAAPLHLPHAVTSQARAWGGSSASSTGRGLPMGWGDTLMVAEGESAEEESREDLDDYQHPGRGXXXXXXXXMALTVRAAELAAEGLTAAAVAEPIVTPLPXXXXAGAQTAAVEGGGGFPQTVPRDASST 840
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8756.16938.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized9.940e-15488.06protein (Fragment) n=1 Tax=Ectocarpus siliculosus ... [more]
Uncharacterized5.480e-12365.88protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8756contigEcto-sp9_F_contig8756:809..3538 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8756.16938.1mRNA_Ecto-sp9_F_contig8756.16938.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8756 800..4286 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8756.16938.1 ID=prot_Ecto-sp9_F_contig8756.16938.1|Name=mRNA_Ecto-sp9_F_contig8756.16938.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=594bp
MAKPSDAGSLRAAGYRAVSRAVLQLGEGAAPYLATPALPAILAEVRAAVA
ASEPEAAGGGGGGAGGDSSFEVVAATGAPGVAAVGGGSKKGMGIEPAMSA
RKSSQKKQRRSREKEVGRALAAADAAAAATATAASNGGGSGGGGGGGAGR
TGAAALAEEQAVCTGLSCLSRVVVCCKGHLPLGGRLAVEEVLHRGLELLA
HAGAAAKGSRGNGGGGGGGGASGGGRRCARLEDPRVAREFLGLAHACLMT
PLADGTRSGSLSVAIAAFRSFASHPDQRLAVASQQALAGCGAVLYPRAAP
LHLPHAVTSQARAWGGSSASSTGRGLPMGWGDTLMVAEVESAEEESQEDL
EDYQHPGRGGGAAGGGGMALTVRAAELAAEGPTAAAVAGPVVTPPPPPPA
AAQTAAPEEGGRFPQTVPRDASSTSAAVAAAASAGAENGDAATTSKSGSG
KGKGKGKGRVGGGAAGGGGGGDGSSSAGAGAAGTVEEDGHNDNEAEAAAA
AATAGTRKRPRNDGDGDGDDARNAMDDEEEEEEEEKVAVVAPRGAAASEG
GGVPAVVKQTQQPVSAILGGGDEDDDDDDFEFPAIVDADPDVE*
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