prot_Ecto-sp9_F_contig8752.16935.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8752.16935.1
Unique Nameprot_Ecto-sp9_F_contig8752.16935.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length286
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8752.16935.1 vs.
Match: EsV-1-6 (n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QNQ3_ESV1K)

HSP 1 Score: 484 bits (1245), Expect = 2.490e-171
Identity = 240/285 (84.21%), Postives = 259/285 (90.88%), Query Frame = 0 
Query:    1 MNNDVDYCAHGCPAGKRCPPAASDSCAIGTPRLQNQGTPLCCEVEDDAVYLRTIRAIHQAPSNNNDAEVVAFKQRLGAMLAFLDIPDQGGGSLFDGVTTLDLVINGNVPACTLQRTADLMRLMLRVRQLSLVDLCAETLVGLPPELRNNDKILYSVHAAEYPRDQALPSVSHGNYTFWYDTPISAVQFFSVVLRILQRQPDLEQRRSQISLECTWNNDGSRIRRRQMNLLLHLVRTSQFLGKIVASKSIVFGTPLFEAGIPLQTTTVAEGRTITSSDDTLTIEII 285
            MNND+DYCA+GCPAGKRCPPAASDSCAIGTPRLQNQGTPLCCEVEDDAVYLRT+RAIHQAPS+ NDAEVVAFKQRLG MLAFLDIP+QGGGSL+DG+ TL+LVINGN PACTLQR  DLMRLM+RVR++SLV+LCAE  VGLPPELRNNDKI+Y VHAAEY RDQALPS+SHGNYTFWYDTP+SA QFFS+VLR L RQ  L QRRSQISL C WNNDGSRIRRRQMNL+L  VRTS FLGKI+ASK IV  TPLFEA IPLQTTTVAEGRT+TSS DTLTIEII
Sbjct:    1 MNNDIDYCAYGCPAGKRCPPAASDSCAIGTPRLQNQGTPLCCEVEDDAVYLRTVRAIHQAPSHYNDAEVVAFKQRLGVMLAFLDIPNQGGGSLYDGIVTLNLVINGNTPACTLQRATDLMRLMVRVRRVSLVELCAEIFVGLPPELRNNDKIIYHVHAAEYYRDQALPSLSHGNYTFWYDTPVSAFQFFSLVLRTLDRQTGLVQRRSQISLVCNWNNDGSRIRRRQMNLILRHVRTSTFLGKIIASKPIVGNTPLFEADIPLQTTTVAEGRTVTSSVDTLTIEII 285
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8752.16935.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
EsV-1-62.490e-17184.21n=1 Tax=Ectocarpus siliculosus virus 1 (isolate Ne... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 284..285

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8752contigEcto-sp9_F_contig8752:4318..5175 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8752.16935.1mRNA_Ecto-sp9_F_contig8752.16935.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8752 4318..5175 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8752.16935.1 ID=prot_Ecto-sp9_F_contig8752.16935.1|Name=mRNA_Ecto-sp9_F_contig8752.16935.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=286bp
MNNDVDYCAHGCPAGKRCPPAASDSCAIGTPRLQNQGTPLCCEVEDDAVY
LRTIRAIHQAPSNNNDAEVVAFKQRLGAMLAFLDIPDQGGGSLFDGVTTL
DLVINGNVPACTLQRTADLMRLMLRVRQLSLVDLCAETLVGLPPELRNND
KILYSVHAAEYPRDQALPSVSHGNYTFWYDTPISAVQFFSVVLRILQRQP
DLEQRRSQISLECTWNNDGSRIRRRQMNLLLHLVRTSQFLGKIVASKSIV
FGTPLFEAGIPLQTTTVAEGRTITSSDDTLTIEII*
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