prot_Ecto-sp9_F_contig8748.16929.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8748.16929.1
Unique Nameprot_Ecto-sp9_F_contig8748.16929.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length320
Homology
BLAST of mRNA_Ecto-sp9_F_contig8748.16929.1 vs.
Match: J (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K446_9PHAE)

HSP 1 Score: 448 bits (1153), Expect = 4.800e-153
Identity = 268/319 (84.01%), Postives = 277/319 (86.83%), Query Frame = 0
Query:    1 MRLDDDIDWSYAVVGSPLLAWMGLTIVGHVYDATRPVPQDRSEESILNDEEGGIPPDVEKREQAIAKRTEARSAVAKDCVWMLQLVFLIIKLDGNVDWNWWLVFFPTWFVLFGQLVGYYVDYSLARSLSAGMEGKEEEELTQEERVRMVXXXXXXXXXXXXXXXWVFTLVTVVLAVNAIAGADYSTFVIFIPQFIIAGTLLCCATCFICCMRDLGDLDDDAADPEQGGSGASTSQHLPGSYGTYNPPAMAGGGXXSKASPAGXXXXANXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTPAPDLQEDGGID 319
            M+LD DIDWSYAVVGSPLLAWMGL IVGHVYDATRPVPQDRSEESILN EE GIPPDVEKREQAIAKR+EAR+AVAKDC+WMLQLVFLIIKLDG+VDWNWWLVF PTW VLFGQLVGYYVDYSLAR+LSAG+EGK EEELTQEERVRMV          XXXXXWVFT+VTVVLAVNAIAGADYSTFVIFIPQFIIAGTLLCCATCFICC+RDLGD  DDAADPEQGGSGASTSQH PGSYGTYNPP M GGG  SK SP G    AN  XXX      XXXXXXXXXXXXXXXXXXXXXX    TTPAPDLQEDGGID
Sbjct:  218 MQLDGDIDWSYAVVGSPLLAWMGLLIVGHVYDATRPVPQDRSEESILNAEEEGIPPDVEKREQAIAKRSEARTAVAKDCIWMLQLVFLIIKLDGDVDWNWWLVFLPTWIVLFGQLVGYYVDYSLARNLSAGIEGKAEEELTQEERVRMVAASQLLVHASXXXXXWVFTVVTVVLAVNAIAGADYSTFVIFIPQFIIAGTLLCCATCFICCIRDLGDQGDDAADPEQGGSGASTSQHPPGSYGTYNPPEMPGGGGASKVSPGGGAPPANASXXXAVIAMPXXXXXXXXXXXXXXXXXXXXXX----TTPAPDLQEDGGID 532          
BLAST of mRNA_Ecto-sp9_F_contig8748.16929.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKW2_9PHAE)

HSP 1 Score: 113 bits (282), Expect = 9.230e-26
Identity = 70/209 (33.49%), Postives = 107/209 (51.20%), Query Frame = 0
Query:    1 MRLDDDIDWSYAVVGSPLLAWMGLTIVGHVYDATRPVPQDRSEESILNDEEGGIPPDVEKREQAIAKRTEARSAVAKDCVWMLQLVFLIIKLDGNVDWNWWLVFFPTWFVLFGQLVGYYVDYSLARSLSAGMEGKEEEELTQEERVRMVXXXXXXXXXXXXXXXWVFTLVTVVLAVNAIAGADYSTFVIFIPQFIIAGTLLCCATCFIC 209
            +RLD  I WS+  V +PL+AW+ L I+G +Y                          ++ +   + +   A  A+ +  +  LQ++FL+ +LDG V WNWW+VF PTW +  GQL  +  + +LA SL+ G+E  + E  T+E+R +++                  TLVT VLAV  +AGADYS F++F+PQF  A       TC +C
Sbjct:   68 LRLDHHISWSWEEVLAPLMAWVWLRIIGELYRIV-----------------------LQTKRLFVGRVVAAIKAMGEAAMLFLQVLFLMWRLDGEVAWNWWVVFVPTWLLHAGQLFTWCTNQALAMSLARGLE--DHEGSTEEQRRKLLEASVLMDNAKHSRKLLGGTLVTSVLAVYLVAGADYSAFIVFLPQFFSAIWFTFAVTCLVC 251          
BLAST of mRNA_Ecto-sp9_F_contig8748.16929.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY5_ECTSI)

HSP 1 Score: 110 bits (276), Expect = 2.850e-24
Identity = 69/209 (33.01%), Postives = 106/209 (50.72%), Query Frame = 0
Query:    1 MRLDDDIDWSYAVVGSPLLAWMGLTIVGHVYDATRPVPQDRSEESILNDEEGGIPPDVEKREQAIAKRTEARSAVAKDCVWMLQLVFLIIKLDGNVDWNWWLVFFPTWFVLFGQLVGYYVDYSLARSLSAGMEGKEEEELTQEERVRMVXXXXXXXXXXXXXXXWVFTLVTVVLAVNAIAGADYSTFVIFIPQFIIAGTLLCCATCFIC 209
            +RLD  I WS+  V +PL+AW+ L I G +Y                          ++ +   + +   A  A+ +  +  LQ++FL+ +LDG V+WNWW+VF PTW +  GQL  +  + +LA SL+ G+E  +    T+E+R +++                  TLVT VLAV  +AGADYS F++F+PQF  A       TC +C
Sbjct:  148 LRLDRHISWSWEEVLAPLMAWVWLRIAGELYRIV-----------------------LQTKRLFVGRVIAAIKAMGEAAMLFLQVLFLMWRLDGEVNWNWWVVFVPTWLLHAGQLFTWCTNQALAMSLARGLEDNDGS--TEEQRRKLLEASVLMDNAKHSRKLLGGTLVTSVLAVYLVAGADYSAFIVFLPQFFSAIWFTFVVTCLVC 331          
BLAST of mRNA_Ecto-sp9_F_contig8748.16929.1 vs.
Match: J (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHD5_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 6.380e-19
Identity = 78/280 (27.86%), Postives = 121/280 (43.21%), Query Frame = 0
Query:    1 MRLDDDIDWSYAVVGSPLLAWMGLTIVGHVYDATRPVPQDRSE---------------------------ESILNDEEGGIPPDVEKREQAIAKRTEARSAVAKDCVWMLQLVFLIIKLDGNVDWNWWLVFFPTWFVLFGQLVGYYVDYSLARSLSAGMEGKEEEELTQEERVR----------------MVXXXXXXXXXXXXXXXWVFTLVTVVLAVNAIAGADYSTFVIFIPQFIIAGTLLCCATCFICCMR--------------DLGDLDDDAAD 223
            +RLD +I WS+A V  P L W   T+   +  A  P+P++  +                           + IL + EG    D  KR   +  R +AR  +      +LQ + LI++LD ++ W+WW V++PT+  +   L    + Y  +  L + +   E   L++E+ ++                M                W   LV V+LAV  +AGAD+STF+IFIP F  AG L+C  +C ICCMR              DL D+D +A +
Sbjct:  234 LRLDSNITWSWACVLVPWLVWESATLCATLLRAMLPLPREDDQYYQVVRXXXXXXXXXXXXXXXXXXXXXQGILEEGEGEGAQDA-KRAAVMLVRQKARGELFIKVTRLLQGIMLILRLDHDITWDWWAVWWPTYAYVAFHLASLLLVYLQSLHLLSDLTANEAGTLSEEDAMKASGLFADAAAAGAQACMEFAQMLRSQAKAGCFSWGVLLVMVLLAVAKMAGADFSTFIIFIPVFAAAGCLVCTMSCLICCMRARASTAALAGSCDGDLSDMDMEAGE 512          
BLAST of mRNA_Ecto-sp9_F_contig8748.16929.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY67_9PHAE)

HSP 1 Score: 85.5 bits (210), Expect = 1.170e-14
Identity = 40/49 (81.63%), Postives = 44/49 (89.80%), Query Frame = 0
Query:  165 WVFTLVTVVLAVNAIAGADYSTFVIFIPQFIIAGTLLCCATCFICCMRD 213
            W FTLV V LA+NAIAGAD+ST V+FIPQFI+AGTLLCCA CFICCMRD
Sbjct:  493 WGFTLVAVALAINAIAGADHSTLVMFIPQFIMAGTLLCCAICFICCMRD 541          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8748.16929.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
J4.800e-15384.01domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Uncharacterized9.230e-2633.49protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.850e-2433.01protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
J6.380e-1927.86domain-containing protein n=1 Tax=Tribonema minus ... [more]
Protein1.170e-1481.63kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019396Transmembrane Fragile-X-F-associated proteinPFAMPF10269Tmemb_185Acoord: 78..195
e-value: 5.8E-6
score: 26.2
IPR019396Transmembrane Fragile-X-F-associated proteinPANTHERPTHR13568FAM11A, B PROTEINcoord: 80..205
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 154..180
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 181..185
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 74..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 32..73
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 121..153
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..120
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 186..210
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 93..97
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 211..319
NoneNo IPR availableTMHMMTMhelixcoord: 98..120
NoneNo IPR availableTMHMMTMhelixcoord: 186..208
NoneNo IPR availableTMHMMTMhelixcoord: 154..176
NoneNo IPR availableTMHMMTMhelixcoord: 9..31

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8748contigEcto-sp9_F_contig8748:210..4091 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8748.16929.1mRNA_Ecto-sp9_F_contig8748.16929.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8748 195..4091 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8748.16929.1 ID=prot_Ecto-sp9_F_contig8748.16929.1|Name=mRNA_Ecto-sp9_F_contig8748.16929.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=320bp
MRLDDDIDWSYAVVGSPLLAWMGLTIVGHVYDATRPVPQDRSEESILNDE
EGGIPPDVEKREQAIAKRTEARSAVAKDCVWMLQLVFLIIKLDGNVDWNW
WLVFFPTWFVLFGQLVGYYVDYSLARSLSAGMEGKEEEELTQEERVRMVA
ASQLVVHAASSCCCWVFTLVTVVLAVNAIAGADYSTFVIFIPQFIIAGTL
LCCATCFICCMRDLGDLDDDAADPEQGGSGASTSQHLPGSYGTYNPPAMA
GGGGASKASPAGAAPPANASAGAAVIAMPPPPPASGSGQQAEVPVAAPAP
RPVPVTTPAPDLQEDGGID*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019396TM_Fragile-X-F-assoc