prot_Ecto-sp9_F_contig8746.16928.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8746.16928.1
Unique Nameprot_Ecto-sp9_F_contig8746.16928.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length133
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8746.16928.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQA3_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 8.240e-56
Identity = 105/131 (80.15%), Postives = 111/131 (84.73%), Query Frame = 0 
Query:    2 APSSAAGAQLDDRGPGSGLATPSSPAGDGPSPSSGRSAWVSRQRVGEGKQAGRLGAAVVRLEPRVLHFGESPLCIPTSATVEVKNYRESQMTRSARTTAGRQKGCPWTPEDHPSRGPPECSRGGVGYEDDD 132
            APSSA GAQ DDR PGSGLA PSS AGDG SPSSGRSAWVSRQRVG+GKQAGR GAA VRLEP +LHFGESPLCIPTSATV VKN+RESQMTR AR + GR+  CPW PED+PSR PPECSR G GYE DD
Sbjct:  128 APSSATGAQPDDRDPGSGLAAPSSLAGDGTSPSSGRSAWVSRQRVGKGKQAGRFGAAAVRLEPPLLHFGESPLCIPTSATVAVKNHRESQMTRGARASVGRRADCPWNPEDNPSREPPECSRDGEGYEGDD 258
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BLAST of mRNA_Ecto-sp9_F_contig8746.16928.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LB05_ECTSI)

HSP 1 Score: 99.4 bits (246), Expect = 1.350e-21
Identity = 54/61 (88.52%), Postives = 56/61 (91.80%), Query Frame = 0 
Query:    1 DAPSSAAGAQLDDRGPGSGLATPSSPAGDGPSPSSGRSAWVSRQRVGEGKQAGRLGAAVVR 61
            D PS+AAGAQLDDR PGSGLATPSSP GDGPSPSSGRSAWVSRQRVGEGKQAGR GAAV +
Sbjct:  127 DGPSAAAGAQLDDRDPGSGLATPSSPGGDGPSPSSGRSAWVSRQRVGEGKQAGRFGAAVAQ 187
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8746.16928.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized8.240e-5680.15protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.350e-2188.52protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8746contigEcto-sp9_F_contig8746:4858..5702 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8746.16928.1mRNA_Ecto-sp9_F_contig8746.16928.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8746 4858..5702 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8746.16928.1 ID=prot_Ecto-sp9_F_contig8746.16928.1|Name=mRNA_Ecto-sp9_F_contig8746.16928.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=133bp
DAPSSAAGAQLDDRGPGSGLATPSSPAGDGPSPSSGRSAWVSRQRVGEGK
QAGRLGAAVVRLEPRVLHFGESPLCIPTSATVEVKNYRESQMTRSARTTA
GRQKGCPWTPEDHPSRGPPECSRGGVGYEDDDD
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