prot_Ecto-sp9_F_contig874.16922.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig874.16922.1
Unique Nameprot_Ecto-sp9_F_contig874.16922.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length613
Homology
BLAST of mRNA_Ecto-sp9_F_contig874.16922.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCI0_9PHAE)

HSP 1 Score: 638 bits (1646), Expect = 3.340e-225
Identity = 344/404 (85.15%), Postives = 358/404 (88.61%), Query Frame = 0
Query:  209 GLDLPDVKDGCHALKILFVPVFLSYLDIGTDIYTSYTYYQSGHVVWGTLGLVFALLPGVIVALFFLSGVGFVRRLLVVLQLSVLVEAFSTATGEVYSRTLGLVRVVEPLFEAVPQLLLQLHAILVLWNEETPSPNPLLAPFRSVFISVLSLSYAATDISSVEGLKAAATPVGDASNWCSRCSRPSCCWPTWCPWSVTRLAFSRAPTKGELDLGCLGKMHPQTQVWVCFLYHILEVVSRFIPLAFLILLTRPWFIGVLMYFWLSRAALVGWMAGQKDDRRSRLNAARDEFSSLRFKVRVVAMPFLDSIIFQEVAFVVGLWLTLLEFVMFTTLYHVYPSDEVASHDRSVFTIVAATCLVLKMLLARLVMMPLKKEVAVFTKSDEASKREEIHDSKTHALRTDQQGS 612
            GLDLP+      A +I+F P    YLDIGTDIYTSYTY+Q GHVVWGTLGLV ALLPG+I ALFFLSGVGFVRRLLVVLQLSVLVEAFSTATGEVYSR LG VRVVEPLFEA   LLLQLHAILV WNEE PSPN  LAPFRSVFISV S SYA TD SSVEGLKAAATPVGD SNWCSRCSRPSCCWPTWCPWS TRL FSRAPTKGEL+LGCLGKMHPQTQVWVCFLYHI+EVVSRFIPLAFLILLTRPWFIGVL+YFWLS+AALVGWMA Q DDRRSRLNAARDEFSSLRFKVRVVAMPFLDSII QE AFVVGLWLT LEFV++TTLYHVYPSDEVASHD+ VFTI+AA CL    LLARLVMM LKKEVAV T SDEASKREEI+DSKTHALR DQQGS
Sbjct:    5 GLDLPE------ANRIVFRP----YLDIGTDIYTSYTYFQPGHVVWGTLGLVIALLPGIIEALFFLSGVGFVRRLLVVLQLSVLVEAFSTATGEVYSRKLGFVRVVEPLFEAALHLLLQLHAILVPWNEEPPSPNTFLAPFRSVFISVGSQSYAVTDNSSVEGLKAAATPVGDVSNWCSRCSRPSCCWPTWCPWSGTRLPFSRAPTKGELNLGCLGKMHPQTQVWVCFLYHIVEVVSRFIPLAFLILLTRPWFIGVLVYFWLSQAALVGWMAWQTDDRRSRLNAARDEFSSLRFKVRVVAMPFLDSIISQEEAFVVGLWLTDLEFVVYTTLYHVYPSDEVASHDQLVFTIIAAICL----LLARLVMMSLKKEVAVCTNSDEASKREEINDSKTHALRADQQGS 394          
BLAST of mRNA_Ecto-sp9_F_contig874.16922.1 vs.
Match: Hypothetical (leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBY3_ECTSI)

HSP 1 Score: 298 bits (763), Expect = 1.020e-86
Identity = 181/372 (48.66%), Postives = 236/372 (63.44%), Query Frame = 0
Query:  209 GLDLPDVKDGCHALKILFVPVFLSYLDIGTDIYTSYTYYQSGHVVWGTLGLVFALLPGVIVALFFLSGVGFVRRLLVVLQLSVLVEAFSTATGEVYSRTLGLVRVVEPLFEAVPQLLLQLHAILVLWNEETPSPNPLLAPFRSVFISVLSLSYAATDISSVEGLKAA-ATPVGDASNWCSRCSRPSCCWPTWCPWSVTRLAFSRAPTKGELDLGCLGKMHPQTQVWVCFLYHILEVVSRFIPLAFLILLTRPWFIGVLMYFWLSRAALVGWMAGQKDDRRSRLNAARDEFSSLRFKVRVVAMPFLDSIIFQEVAFVVGLWLTLLEFVMFTTLYHVYPSDEVASHDRSVFTIVAATCLVLKMLLARLVMMPLK 579
            G  LP V+   HA K+L VPV L Y D+ +D+YT+ +YY++ H VW  LGLVFAL P VI++LF LSG+G+ RR LV  QLS+L EA  T T   YS  L LVRV+EPLFE+VPQLLLQLHA+L LW E + + + L     SV IS  SL+YAATD+SSVE L        G+    C        C+P     S+T L FSR P +G   L  LG +HP++ VW+C +YH+LE+V+RF+PLA L+L+ R WF  VL+Y W+SRA +V WMA +             E    RF VR+VAMPFLDSI+ +  AF +GL LTL+EF++   +YHVY  D++ S  R V   VA+ C+V KM LA + + PLK
Sbjct:  397 GPPLPAVRGPLHAFKVLIVPVLLGYADLASDLYTAVSYYEARHFVWFGLGLVFALGPAVIMSLFCLSGIGWFRRFLVAAQLSLLAEALITLTKADYSPVLALVRVIEPLFESVPQLLLQLHAMLWLWTETSFTSSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDGGKDGERFRLCP-------CFP-----SLTGLVFSRVPAQGTSSLRGLGNVHPRSHVWLCLVYHVLEIVARFVPLAMLLLVVRGWFFFVLVYLWVSRALMV-WMAAR-------------EVLGFRFWVRLVAMPFLDSIMDETTAFGIGLGLTLVEFIVCMVVYHVYKHDDLPSRARLVLVTVASCCMVGKMCLALVAISPLK 742          
BLAST of mRNA_Ecto-sp9_F_contig874.16922.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ93_9PHAE)

HSP 1 Score: 282 bits (721), Expect = 2.960e-84
Identity = 173/372 (46.51%), Postives = 230/372 (61.83%), Query Frame = 0
Query:  209 GLDLPDVKDGCHALKILFVPVFLSYLDIGTDIYTSYTYYQSGHVVWGTLGLVFALLPGVIVALFFLSGVGFVRRLLVVLQLSVLVEAFSTATGEVYSRTLGLVRVVEPLFEAVPQLLLQLHAILVLWNEETPSPNPLLAPFRSVFISVLSLSYAATDISSVEGLKAAATPV-GDASNWCSRCSRPSCCWPTWCPWSVTRLAFSRAPTKGELDLGCLGKMHPQTQVWVCFLYHILEVVSRFIPLAFLILLTRPWFIGVLMYFWLSRAALVGWMAGQKDDRRSRLNAARDEFSSLRFKVRVVAMPFLDSIIFQEVAFVVGLWLTLLEFVMFTTLYHVYPSDEVASHDRSVFTIVAATCLVLKMLLARLVMMPLK 579
            G  LP V+D  HA KIL VPV L Y D+ +D+YT+ +YY++ H VW  LGL FAL P VI++ F LSGVG+ RR LV  QLS+L EA  T     YS  L LVRV+ PLFE+VPQLLLQLHA+L LW E + + + L     SV IS  SL+YAATD+SSVE L      + G+    C        C+P     S+T + FSR P +G   L  +G +HP++ VW+C +YH+LE+ +RF+PLA L+ + R WF  VL+Y W+ R  +V WM  +             E    RF VR+VAMPFLDSI+ +  AF +GL LTL+EF++   +YHVY +D++ S  R V   VA+ C+V KM LA + + PLK
Sbjct:   50 GPPLPAVRDPLHAFKILIVPVILGYADLASDLYTAVSYYEAKHFVWFGLGLFFALGPAVIMSAFCLSGVGWFRRFLVATQLSLLAEALITLQKADYSPVLALVRVIGPLFESVPQLLLQLHAMLWLWTETSFASSRLAWRVVSVCISAASLAYAATDVSSVERLSTCDGGMDGERFRLCP-------CFP-----SLTGVVFSRVPAEGTSSLRGVGDVHPRSHVWLCLVYHVLEIFARFVPLAMLVQVVRGWFFFVLVYLWVGRGLIV-WMTAR-------------EVLGFRFWVRLVAMPFLDSIMDETTAFGIGLVLTLVEFIVCMVIYHVYMNDDLPSRARLVLVTVASCCMVGKMCLAWVAISPLK 395          
BLAST of mRNA_Ecto-sp9_F_contig874.16922.1 vs.
Match: Leucine (Rich Repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFI4_ECTSI)

HSP 1 Score: 286 bits (732), Expect = 9.210e-82
Identity = 184/391 (47.06%), Postives = 236/391 (60.36%), Query Frame = 0
Query:  193 LSDHQNSDRFKIGLDRGLD---LPDVKDGCHALKILFVPVFLSYLDIGTDIYTSYTYYQSGHVVWGTLGLVFALLPGVIVALFFLSGVGFVRRLLVVLQLSVLVEAFSTATGEVYSRTLGLVRVVEPLFEAVPQLLLQLHAILVLWNEETPSPNPLLAPFRSVFISVLSLSYAATDISSVEGLKAAATPVGDASNWCSRCSRPSCCWPTWCPWSVTRLAFSRAPTKGELDL-GCLGKMHPQTQVWVCFLYHILEVVSRFIPLAFLILLTRPWFIGVLMYFWLSRAALVGWMAGQKDDRRSRLNAARDEFSSLRFKVRVVAMPFLDSIIFQEVAFVVGLWLTLLEFVMFTTLYHVYPSDEVASHDRSVFTIVAATCLVLKMLLARLVMMPLK 579
            L++H    +F +G  R +D   LP V D  HA+KIL VPV L YLD+ +D+YT+ +YY SGH+ W  L + FAL P VIV+ FFL      RR LV  QLS+L+EA  +A    YS  L LVRV+EPLFE+VPQLLLQL+A+L+LW+E + S + L     SV IS +SL+YAATD+SSVE L          +     C          CP SVT L FSR P KG   L G +G +HP+T VW CFLYH+LE+VSRF+PL  + L+ R WF  VL Y W+SR  LV W A    +               RF+VR+VAMPF+DSI+    AF  GL LTL+EFV     YH++ SD +  H R   TI++  C+V KM LA L ++PLK
Sbjct:  164 LAEHPRFKKFIVG--RAMDGPPLPHVNDAGHAVKILIVPVALGYLDLASDLYTAVSYYNSGHLFWFVLVVAFALGPAVIVSAFFLPEFTCGRRFLVATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSGEGGTERFRMCPD--------CP-SVTALVFSRVPEKGVSRLAGRMGWVHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLRKWFFLVLPYLWISRC-LVVWAAAYSGE----------ATMGFRFRVRIVAMPFIDSILDGTRAFGAGLVLTLVEFVACIVTYHLFSSDHLPPHARWTLTIISICCMVGKMRLALLAIIPLK 532          
BLAST of mRNA_Ecto-sp9_F_contig874.16922.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL60_9PHAE)

HSP 1 Score: 249 bits (636), Expect = 7.990e-73
Identity = 160/321 (49.84%), Postives = 203/321 (63.24%), Query Frame = 0
Query:  259 LVFALLPGVIVALFFLSGVGFVRRLLVVLQLSVLVEAFSTATGEVYSRTLGLVRVVEPLFEAVPQLLLQLHAILVLWNEETPSPNPLLAPFRSVFISVLSLSYAATDISSVEGLKAAATPVGDASNWCSRCSRPSCCWPTWCPWSVTRLAFSRAPTKGELDLGCLGKMHPQTQVWVCFLYHILEVVSRFIPLAFLILLTRPWFIGVLMYFWLSRAALVGWMAGQKDDRRSRLNAARDEFSSLRFKVRVVAMPFLDSIIFQEVAFVVGLWLTLLEFVMFTTLYHVYPSDEVASHDRSVFTIVAATCLVLKMLLARLVMMPLK 579
            L FAL P VIVALF LSGVG  RR LV  QLS+L EA++T  G+VYS  L LVRVVEPLFE+VPQLLLQL+A+L LW E + S + L     SV ISV SL+YAATD+SSVE L       G  S+ C R     CC       S+T L FSR P +G   L  +G +HP++ VW+CF+YH+LE+V+RF+PLA L+L+ R WF+ VL+Y W+SR  +V                   E    RF VR+VAMPFLDSI+ +  AF  GL LTL+EF++   +YHVY  D++ S  R V   VA+ C+V KM LA + + PLK
Sbjct:   13 LFFALGPAVIVALFVLSGVGPFRRFLVATQLSLLAEAWNTVGGQVYSPVLALVRVVEPLFESVPQLLLQLYAMLRLWPETSSSSSRLAWREVSVCISVASLAYAATDVSSVERL----LTCGGGSD-CERFRLGPCCS------SLTGLVFSRVPAQGTSSLKGVGNVHPRSHVWLCFVYHVLEIVARFVPLAMLVLVVRGWFLLVLVYLWVSRVLMV---------------RVTREGLDFRFGVRLVAMPFLDSIMDETTAFGTGLVLTLVEFILCVVIYHVYKHDDLPSGARLVLVTVASCCMVGKMCLAWVTISPLK 307          
BLAST of mRNA_Ecto-sp9_F_contig874.16922.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD04_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 3.010e-66
Identity = 155/364 (42.58%), Postives = 221/364 (60.71%), Query Frame = 0
Query:  225 LFVPVFLSYLDIGTDIYTSYTYYQSGHVVWGTLGLVFALLPGVIVALFFLSG------VGFVRRLLVVLQLSVLVEAFSTATGEVYSRTLGLVRVVEPLFEAVPQLLLQLHAILVLWNEETPSPNPLLAPFRSVFISVLSLSYAATDISSVEGLKAAATPVGDASNWCSRCSRPSCCWPTWCPWSVTRLAFSRAPTKGELDLGCLGKMHPQTQVWVCFLYHILEVVSRFIPLAFLILLTRPWFIGVLMYFWLSRAALVGWMAGQKDDRRSRLNAARDEFS-SLRFKVRVVAMPFLDSIIFQEVAFVVGLWLTLLEFVMFTTLYHVYPSDEVASHDRSVFTIVAATCLVLKMLLARLVMMPLKKE 581
            + + VF  YLD+ +D+YT+ +YY+SG   W TL L FAL PG+I ++FFL+       V +VRR+LV  QLS+LVEA+       ++  L +VR++E LFE+VPQLLLQL+A L+LW+    SP   +    SV IS  SL+Y ATD+ S + L+  + P+      C     P C W       +T L FSR P KG   L   G +HP+T VW+C LYHILE+VSRF+PLA L L+ R WF  VL Y W SR A+    A          + AR   S + R +V++VAMPFLDS++    AF +GL +TL+EF++   +YH+Y  D++ ++ R    +VA++C+V K+LLA L + PL+ +
Sbjct:   66 VMLQVFFGYLDLVSDLYTAVSYYESGDSFWFTLVLAFALGPGIIASVFFLTPTIVRVRVPWVRRVLVATQLSLLVEAWRNVAKRRFTPILEVVRLIEALFESVPQLLLQLYAALLLWS----SPERNVLRLGSVCISAGSLAYNATDLFSAKRLERCSDPL--EGGIC-----PCCSW-------LTGLPFSRVPEKGSSRLNGWGDVHPRTHVWLCLLYHILEIVSRFVPLAMLALVMRKWFFLVLPYLWWSRYAVRKKAAAWTRKSTRETDKARPRKSVTERVRVKLVAMPFLDSVMDGSAAFGLGLVVTLVEFIVCVVIYHLYNHDDLPTNLRLGLYVVASSCMVGKLLLAALAIFPLRAD 411          
BLAST of mRNA_Ecto-sp9_F_contig874.16922.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K7Q2_9PHAE)

HSP 1 Score: 241 bits (615), Expect = 7.240e-66
Identity = 168/394 (42.64%), Postives = 220/394 (55.84%), Query Frame = 0
Query:  193 LSDHQNSDRFKIGLDRGLD---LPDVKDGCHALKILFVPVFLSYLDIGTDIYTSYTYYQSGHVVWGTLGLVFALLPGVIVALFFLSGVGFVRRLLVVLQLSVLVEAFSTATGEVYSRTLGLVRVVEPLFEAVPQLLLQLHAILVLWNEETPSPNPLLAPFRSVFISVLSLSYAATDISSVEGL---KAAATPVGDASNWCSRCSRPSCCWPTWCPWSVTRLAFSRAPTKGELDL-GCLGKMHPQTQVWVCFLYHILEVVSRFIPLAFLILLTRPWFIGVLMYFWLSRAALVGWMAGQKDDRRSRLNAARDEFSSLRFKVRVVAMPFLDSIIFQEVAFVVGLWLTLLEFVMFTTLYHVYPSDEVASHDRSVFTIVAATCLVLKMLLARLVMMPLK 579
            L++H    +F +G  R +D   LP + D  HA+KIL VPV L YLD+ +D+YT                      P  I A +F    G  RR LV  QLS+L+EA  +A    YS  L LVRV+EPLFE+VPQLLLQL+A+L+LW+E + S + L     SV IS +SL+YAATD+SSVE L   + +     + S  C  C              +T L FSR P KG   L G +G +HP+T VW CFLYH+LE+VSRF+PL  + L+ R WF  VL Y W+SR  LV W A    +               RF+VR+VAMPF+DSI+    AF  GL LTL++FV     YH++ S  +  H R   TI+A  C+V KM LA L ++PLK
Sbjct:   93 LAEHPRFKKFIVG--RAMDGPPLPHINDTGHAVKILIVPVALGYLDLTSDLYT----------------------PTTIQATYFEFTCG--RRFLVATQLSLLLEAVFSAASRTYSPVLALVRVIEPLFESVPQLLLQLYAMLLLWSETSLSNSDLNGRVISVCISTVSLAYAATDVSSVERLLNTRLSGEGGTERSRMCPDCP------------FITGLVFSRVPEKGVSRLAGRMGWVHPRTHVWFCFLYHVLEIVSRFVPLTMIALVLRKWFFLVLPYLWISRC-LVVWAAAYWGE----------ATMGFRFRVRIVAMPFIDSILDGTRAFGAGLVLTLVKFVACIVTYHLFSSGHLPPHARWTLTIIAICCMVGKMRLALLAILPLK 437          
BLAST of mRNA_Ecto-sp9_F_contig874.16922.1 vs.
Match: HTH (psq-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6W6_9PHAE)

HSP 1 Score: 183 bits (465), Expect = 4.150e-47
Identity = 140/382 (36.65%), Postives = 182/382 (47.64%), Query Frame = 0
Query:  209 GLDLPDVKDGCHALKILFVPVFLSYLDIGTDIYTSYTYYQSGHVVWGTLGLVFALLPGVIVALFFLSGVGFVRRLLVVLQLSVLVEAFSTATGEVYSRTLGLVRVVEPLFEAVPQLLLQLHAILVLWNEETPSPNPLL-------------------------APFRSVFISVLSLSYAATDISSVEGLKAAATPVGDASNWCSRCSRPSCCWPTWCPWSVTRLAFSRAPTKGELDLGCLGKMHPQTQVWVCFLYHILEVVSRFIPLAFLILLTRPWFIGVLMYFWLSRAALVGWMAGQKDDRRSRLNAARDEFSSLRFKVRVVAMPFLDSIIFQEVAFVVGLWLTLLEFVMFTTLYHVYPSDEVASHDRSVFTIVAATCLV 565
            G  LP V+D  HA KIL +PV L Y D+ +DI+T+  Y++  H VWG LGL FAL P +I ++FFLSG  + RR+LV   LS++ EA++T   E YS  L LVRVVEPLFE+VPQLLLQL+A+L+LW E   S   L+                             SV ISV SL+YAATD+SSVE L   AT  G+                                                              VS F+ LA    + R W   VL+Y W+SR  +V   A +                  RF+VR+VAMPF DSI+   V F   L  TLLEF++   LYH Y  D++++  R   TIV  +C+V
Sbjct:   47 GPPLPQVEDDDHAKKILVLPVSLGYPDLVSDIFTAVFYFRGDHPVWGGLGLAFALGPALITSIFFLSGFQWYRRVLVATHLSLIYEAWTTVGDEQYSPVLALVRVVEPLFESVPQLLLQLYAMLILWTETMLSHGRLVWRXXXXXXXXXXXXXXXXXXXXXXXXXVGSVCISVASLAYAATDVSSVEFL---ATQTGE--------------------------------------------------------------VSYFVSLAMFFTVIRKWSSLVLLYLWMSRGVIVXIWASKTS-------------LDFRFRVRLVAMPFTDSIVDGAVVFRGALVWTLLEFMLCLALYHAYAQDDLSASARRALTIVVCSCMV 350          
BLAST of mRNA_Ecto-sp9_F_contig874.16922.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIQ5_9PHAE)

HSP 1 Score: 149 bits (375), Expect = 1.090e-34
Identity = 118/376 (31.38%), Postives = 192/376 (51.06%), Query Frame = 0
Query:  218 GCHALKILFVPVFLSYLDIGTDIYTSYTYYQSGHVVWGTLGLVFALLPGVIVALFFLSGVGFVRRLLVVLQLSVLVEAFSTATGEVYSRTLGLVRVVEPLFEAVPQLLLQLHAILVLWNEETPSPNPLLAPFRSVFISVLSLSYAATDISSVEGLKAAATPVGDASNWCSRCSRPSCCWPTWCPWSVTRLAFSRAPTKGELDLGCLGKMHPQTQVWVCFLYHILEVVSRFIPLAFLILLTRPWFIGVLMYFWLSRAALVGWMAGQKDDRRSRLNAARDEFSSLRFKVRVVAMPFLDSIIFQEVAFVVGLWLTLLEFVMFTTLYHVYPSDE---VASHDRSVFTIVAATCLVLKMLLARLVMMPLKKEVAVFTKSDE 590
            G  + K + + + L Y D+GTD+    +YYQ+ H+ W  LG++F + P +  A+  L    ++RR+LV LQL +L  A  +     YS  L  +RV+EPL+E+VPQL+LQL+ +L+ W+ +      L     S+  S  SL+YA T + + + L   A P  DA++               CP  +T L F   P    + +    + + Q  VW    Y +LE+ ++FI L  L L+ R +F   L + W SRA ++            R   A +    +R + R+V MPF+DS++     + VG  LT +EFV   T+ +++ +DE   + +    V+T VAA C+V K+ L  L++ P K+ V   T+ +E
Sbjct:   59 GYKSWKSVGIQLVLGYADVGTDVDAVVSYYQADHMWWFALGMIFIIGPALFAAIVLLRREHWLRRVLVALQLGMLFGALVSWGTSSYSPVLASLRVMEPLYESVPQLMLQLYGLLLEWDND--GTMWLSRRLLSILFSCFSLAYATTGLVAEQALSRLA-PTADAAS-------------ASCP-GLTGLVFGAVPANSSVAV-YRSRWNSQKFVWAFLFYQVLEIGAKFISLGLLALVWRAYFFLALFWLWGSRAYVL------------RRLIAGEHSLRVRSQFRLVGMPFMDSVMDVLQTYDVGCALTTVEFVFCLTIGNMFYTDEGGQLPTDVGRVWTYVAAVCMVGKLCLGYLIVRPFKRVVRFGTEQEE 404          
BLAST of mRNA_Ecto-sp9_F_contig874.16922.1 vs.
Match: Hypothetical (leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJQ6_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 3.090e-23
Identity = 109/397 (27.46%), Postives = 187/397 (47.10%), Query Frame = 0
Query:  193 LSDHQNSDRFKIGL-DRGLDLPDVKDGCHALKILFVPVFLSYLDIGTDIYTSYTYYQSGHVVWGTLGLVFALLPGVIVALFFLSGVGFVRRLLVVLQLSVLVEAFSTATGEVYSRTLGLVRVVEPLFEAVPQLLLQLHAILVLWNEETPSPNPLLAPFRSVFISVLSLSYAATDISSVEGLKAAATPVGDASNWCSRCSRPSCCWPTWCPWSVTRLAFSRAPTKGELDLGCLGKMHPQTQVWVCFLYHILEVVSRFIPLAFLILLTRPWFIGVLMYFWLSRAALVGWMAGQKDDRRSRLNAARDEFSSLRFK--VRVVAMPFLDSIIFQEVAFVVGLWLTLLEFVMFTTLYHVYP-SDEVASHD--RSVFTIVAATCLVLKMLLARLVMMPLKKEVA 583
            L +H+N  RF   + + G  +P  +    + + L   + L YLD+ TD+ T  +Y++SG  +W  +G+ F   P +    + L      R +    QL ++VE   +   E YS  L  +RV+EPLF+++P LLLQ H +LV       S   L     SV +S LSL+ A+T I        A  P+     W      P+   P       + + F   P  G + +    ++HPQ  VW   LY ++E++SR + L  + +    +F  +L + WLSR  +     G         +  R++   LRF+  +R  A P +DS+I +  A+ V  + T +E   F  + +  P +DE  + D  R VF++++   +  K+ L   +++P K +++
Sbjct:  270 LRNHRNFRRFVFAVPEHGAPIPPWR----SKRSLIPALVLGYLDLFTDLATVLSYWRSGLTLWFAIGVAFITGPALCAGAYVLREKTVGRGIAAATQLGLIVEGLISVKEESYSHALVALRVLEPLFQSLPMLLLQTHVLLV-------SEECLALRVVSVMVSTLSLAVASTGI-------VAEHPLSQL-RWSRGVKYPTAKLPL-----ASSMFFGTVPFAGSVCVRMGFQLHPQDFVWWFLLYQLMEIISRVLSLGVIAMPLGYYFFCLLAWLWLSRTFIACVSIGD--------SVVREK---LRFRKLIRFAAAPIMDSVIDRVKAYKVSCFFTCVETACFLAVGNALPHADETRASDLTRRVFSVISLLAMGGKIALGTALVVPFKAKIS 631          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig874.16922.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
Uncharacterized3.340e-22585.15protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Hypothetical1.020e-8648.66leucine rich repeat protein n=1 Tax=Ectocarpus sil... [more]
Uncharacterized2.960e-8446.51protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Leucine9.210e-8247.06Rich Repeat protein n=1 Tax=Ectocarpus siliculosus... [more]
Uncharacterized7.990e-7349.84protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.010e-6642.58protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized7.240e-6642.64protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
HTH4.150e-4736.65psq-type domain-containing protein n=1 Tax=Ectocar... [more]
Uncharacterized1.090e-3431.38protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Hypothetical3.090e-2327.46leucine rich repeat protein n=2 Tax=Ectocarpus Tax... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 99..123
e-value: 11.0
score: 12.8
coord: 4..28
e-value: 25.0
score: 10.0
coord: 52..76
e-value: 52.0
score: 7.4
coord: 147..171
e-value: 39.0
score: 8.4
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..207
e-value: 2.3E-57
score: 196.5
IPR018629XK-related proteinPFAMPF09815XK-relatedcoord: 226..366
e-value: 7.5E-13
score: 48.3
NoneNo IPR availablePANTHERPTHR45974FAMILY NOT NAMEDcoord: 69..170
coord: 110..202
NoneNo IPR availablePANTHERPTHR45974:SF68coord: 2..106
NoneNo IPR availablePANTHERPTHR45974:SF68coord: 110..202
NoneNo IPR availablePANTHERPTHR45974:SF68coord: 69..170
NoneNo IPR availablePANTHERPTHR45974FAMILY NOT NAMEDcoord: 2..106
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 520..543
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 252..274
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 460..480
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 455..459
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..251
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 432..454
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 275..431
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 555..575
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 481..519
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 576..612
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 544..554
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 2..198
NoneNo IPR availableTMHMMTMhelixcoord: 252..274
NoneNo IPR availableTMHMMTMhelixcoord: 554..576
NoneNo IPR availableTMHMMTMhelixcoord: 522..544
NoneNo IPR availableTMHMMTMhelixcoord: 459..481
NoneNo IPR availableTMHMMTMhelixcoord: 432..454

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig874contigEcto-sp9_F_contig874:13267..20566 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig874.16922.1mRNA_Ecto-sp9_F_contig874.16922.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig874 10892..21691 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig874.16922.1 ID=prot_Ecto-sp9_F_contig874.16922.1|Name=mRNA_Ecto-sp9_F_contig874.16922.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=613bp
MGALPKLKVLWLHNNQLSGPIPPELAVLQALEDLRLGVNQLNGTLPGEAG
ELSFLRVLDLRENRLSGAIPATLNKLERLVCLDLGSNLLTGKIPILQNMG
NVQVLDLSFNRLKGRIPPELGELSALTTLILSYNDLAGEIPKGLRELRNL
QALLLSDNLLTGSIPESLGQFPGILQFLNLTDNGLSGPLPPHLSDHQNSD
RFKIGLDRGLDLPDVKDGCHALKILFVPVFLSYLDIGTDIYTSYTYYQSG
HVVWGTLGLVFALLPGVIVALFFLSGVGFVRRLLVVLQLSVLVEAFSTAT
GEVYSRTLGLVRVVEPLFEAVPQLLLQLHAILVLWNEETPSPNPLLAPFR
SVFISVLSLSYAATDISSVEGLKAAATPVGDASNWCSRCSRPSCCWPTWC
PWSVTRLAFSRAPTKGELDLGCLGKMHPQTQVWVCFLYHILEVVSRFIPL
AFLILLTRPWFIGVLMYFWLSRAALVGWMAGQKDDRRSRLNAARDEFSSL
RFKVRVVAMPFLDSIIFQEVAFVVGLWLTLLEFVMFTTLYHVYPSDEVAS
HDRSVFTIVAATCLVLKMLLARLVMMPLKKEVAVFTKSDEASKREEIHDS
KTHALRTDQQGS*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR018629XK-rel