prot_Ecto-sp9_F_contig8729.16914.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8729.16914.1
Unique Nameprot_Ecto-sp9_F_contig8729.16914.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length283
Homology
BLAST of mRNA_Ecto-sp9_F_contig8729.16914.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z303_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.830e-21
Identity = 69/178 (38.76%), Postives = 93/178 (52.25%), Query Frame = 0
Query:  101 HTIEGQIRRKKQENRVHKKLTEWGYIVDCETTINAISGKCLVDTQRHFSRLDFRIVNCVNAICILEVDEDHHYWYNLSCEVSRMADVRASPVLAGYTLPIHWIRYSPYGKYRVGSKEIKNLRTTREQVLKDHLDKICSPDFTPEKQENIHYLFYDLVSKKEGPEVMRDPDFPDERIDT 278
            HT EG  R+ KQ+ RV   L E GY VD E TI    G C+ D  RH +RLD  IV   + I I+EVDE+ H  Y +SCE++RM  V  + +  GYT+P+ ++RY+P G        IK  R  RE VL + L ++       ++  N+ YL Y        P V  D DF +  I T
Sbjct:  342 HTKEGAKRQLKQQMRVANLLKEAGYTVDEECTIQY--GGCVPDPDRHRARLDIYIVTITSCILIVEVDEEAHASYLVSCELTRMLQVHEAILSRGYTVPVVFVRYNPNGCITKDGVCIKMTREEREVVLLEFLGRVRDGQQVFQEPLNLVYLCYPTTYGL--PTVCEDTDFDEGMIGT 515          
BLAST of mRNA_Ecto-sp9_F_contig8729.16914.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ85_9STRA)

HSP 1 Score: 102 bits (254), Expect = 3.360e-21
Identity = 65/178 (36.52%), Postives = 93/178 (52.25%), Query Frame = 0
Query:  101 HTIEGQIRRKKQENRVHKKLTEWGYIVDCETTINAISGKCLVDTQRHFSRLDFRIVNCVNAICILEVDEDHHYWYNLSCEVSRMADVRASPVLAGYTLPIHWIRYSPYGKYRVGSKEIKNLRTTREQVLKDHLDKICSPDFTPEKQENIHYLFYDLVSKKEGPEVMRDPDFPDERIDT 278
            H+ EG  R+ KQ+ RV K L E GY VD E TI      C+ D  RH +RLD  +V   + I I+EVDE+ H  Y +SCE++RM  +  + +  GYT+P+ ++RYSP G         +  R  RE  L + L ++ +     E+  N+ YL Y   +    P V  DP F +  I T
Sbjct:  242 HSKEGAKRQLKQQMRVVKVLKEAGYTVDEECTIQYTG--CVPDPDRHHARLDVYVVTITSCILIVEVDEEAHASYLVSCEITRMLQMHEAILTRGYTVPVVFVRYSPNGAITRDGVYFEMTRKEREVALLEFLGRVRAGQQVFEEPLNLVYLCYPTANGL--PTVCEDPHFDEGMIGT 415          
BLAST of mRNA_Ecto-sp9_F_contig8729.16914.1 vs.
Match: Putative (C2H2-type Zinc finger protein n=1 Tax=Emiliania huxleyi virus 99B1 TaxID=187397 RepID=D2TFC0_9PHYC)

HSP 1 Score: 65.5 bits (158), Expect = 1.990e-8
Identity = 55/184 (29.89%), Postives = 89/184 (48.37%), Query Frame = 0
Query:  108 RRKKQENRVHKKLTEWGYI--------------VDCETTINAISGKCLVDTQRHFSRLDFRIVNCVNAICILEVDEDHH---YWYNLSCEVSRMADVRASPVLAGYTLP-IHWIRYSPYGKYRVGSKEIKNLRTTREQVLKDHLDKICSPDFTPEKQENIHYLFYDLVSKKEGPEVMRDPDFPD 273
            RRK QE +V+K LTE GY+                 E  IN   G     +   F  +DF I+N       LEVDE+ H   Y   LSC+  RM DV+A+ + +   +P I+W+RY+P   +    + I+     R++ L + ++++      P +   I Y+FYD+V  +   EV+ + ++ D
Sbjct:  221 RRKIQEEKVNKLLTESGYVQLYNLGDALPPPGNYKREHKINFDCGSNNKQSSHCF--IDF-IINSNGTYIFLEVDENQHRFGYDAMLSCDCKRMTDVQATVIQSDDRIPPIYWLRYNPQA-WHCNEETIRVPTEVRQRFLMERINEV-----QPSESIRIEYMFYDIVDDE--LEVITNEEYAD 393          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8729.16914.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized1.830e-2138.76protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Uncharacterized3.360e-2136.52protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Putative1.990e-829.89C2H2-type Zinc finger protein n=1 Tax=Emiliania hu... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013087Zinc finger C2H2-typeSMARTSM00355c2h2final6coord: 49..71
e-value: 0.43
score: 19.6
coord: 19..43
e-value: 4.5E-4
score: 29.5
coord: 77..101
e-value: 0.98
score: 18.5
IPR013087Zinc finger C2H2-typePFAMPF00096zf-C2H2coord: 77..101
e-value: 0.0022
score: 18.4
coord: 19..43
e-value: 0.0027
score: 18.0
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 79..101
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 77..106
score: 11.552
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 19..48
score: 10.907
IPR013087Zinc finger C2H2-typePROSITEPS50157ZINC_FINGER_C2H2_2coord: 49..76
score: 9.868
NoneNo IPR availableGENE3D3.30.160.60coord: 1..59
e-value: 1.2E-9
score: 40.2
NoneNo IPR availableGENE3D3.30.160.60coord: 60..125
e-value: 1.6E-8
score: 36.2
NoneNo IPR availablePANTHERPTHR24392:SF42coord: 16..54
NoneNo IPR availablePANTHERPTHR24392:SF42coord: 19..105
NoneNo IPR availablePANTHERPTHR24392FAMILY NOT NAMEDcoord: 19..105
NoneNo IPR availablePANTHERPTHR24392FAMILY NOT NAMEDcoord: 16..54
NoneNo IPR availablePANTHERPTHR24392:SF42coord: 49..101
NoneNo IPR availablePANTHERPTHR24392FAMILY NOT NAMEDcoord: 49..101
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 5..55
IPR036236Zinc finger C2H2 superfamilySUPERFAMILY57667beta-beta-alpha zinc fingerscoord: 47..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8729contigEcto-sp9_F_contig8729:4114..4962 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8729.16914.1mRNA_Ecto-sp9_F_contig8729.16914.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8729 4114..4962 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8729.16914.1 ID=prot_Ecto-sp9_F_contig8729.16914.1|Name=mRNA_Ecto-sp9_F_contig8729.16914.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=283bp
CHNPFDTEYGLAVHIETHFACPVDGCPYTTRRPDHMARHVRRHRGDRPFS
CDTCPYAAFTKEEIVVHKRTHSDKKSFVCHLEWCKRSFAQSNQLTMHKKT
HTIEGQIRRKKQENRVHKKLTEWGYIVDCETTINAISGKCLVDTQRHFSR
LDFRIVNCVNAICILEVDEDHHYWYNLSCEVSRMADVRASPVLAGYTLPI
HWIRYSPYGKYRVGSKEIKNLRTTREQVLKDHLDKICSPDFTPEKQENIH
YLFYDLVSKKEGPEVMRDPDFPDERIDTTNVGE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013087Znf_C2H2_type
IPR036236Znf_C2H2_sf