prot_Ecto-sp9_F_contig872.16906.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig872.16906.1
Unique Nameprot_Ecto-sp9_F_contig872.16906.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length135
Homology
BLAST of mRNA_Ecto-sp9_F_contig872.16906.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L587_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 1.230e-68
Identity = 119/135 (88.15%), Postives = 119/135 (88.15%), Query Frame = 0
Query:    3 PCPTRTRASRYYCGICHLFDDAPEKDIYHCPYCNVCRLGKGLGVDYXXXXXXXXXVSMNAPSHTCLSKSLESDCPICNNSLFTSTSQVKGLRCGHFMHLACYK----------FWYRCPICRKSMEDMREYFSQM 127
            PC  R  A RYYCGICHLFDDAPEKDIYHCPYCNVCRLGKGLGVDYXXXXXXXX VSMNAPSHTCLSKSLESDCPICNNSLFTSTSQVKGLRCGHFMHLACYK          FWYRCPICRKSMEDMREYFSQM
Sbjct:  911 PCTGRKMA-RYYCGICHLFDDAPEKDIYHCPYCNVCRLGKGLGVDYXXXXXXXXCVSMNAPSHTCLSKSLESDCPICNNSLFTSTSQVKGLRCGHFMHLACYKEYIGRAESREFWYRCPICRKSMEDMREYFSQM 1044          
BLAST of mRNA_Ecto-sp9_F_contig872.16906.1 vs.
Match: Zinc (ion binding protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Z4_9STRA)

HSP 1 Score: 171 bits (434), Expect = 8.990e-51
Identity = 85/138 (61.59%), Postives = 100/138 (72.46%), Query Frame = 0
Query:    4 CPTRTRA---SRYYCGICHLFDDAPEKDIYHCPYCNVCRLGKGLGVDYXXXXXXXXXVSM-NAPSHTCLSKSLESDCPICNNSLFTSTSQVKGLRCGHFMHLACYK----------FWYRCPICRKSMEDMREYFSQM 127
            CP+ +     SRYYC ICHL DD   KDIYHCPYCNVCRLGKGLGVDY  XXXXX  V++ +A +H C++ SLES+CPIC+  +F ST QVKGLRCGHF+HL CY+           WYRCPIC +SMEDM EYF Q+
Sbjct:   64 CPSNSSTATLSRYYCAICHLHDDDASKDIYHCPYCNVCRLGKGLGVDYCHXXXXXACVTVESADTHRCVTHSLESNCPICSTGMFESTQQVKGLRCGHFLHLNCYREYVRHAEEQAHWYRCPICLRSMEDMTEYFGQL 201          
BLAST of mRNA_Ecto-sp9_F_contig872.16906.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJ29_HETAK)

HSP 1 Score: 171 bits (432), Expect = 1.610e-50
Identity = 75/127 (59.06%), Postives = 90/127 (70.87%), Query Frame = 0
Query:   11 SRYYCGICHLFDDAPEKDIYHCPYCNVCRLGKGLGVDYXXXXXXXXXVSMNAPSHTCLSKSLESDCPICNNSLFTSTSQVKGLRCGHFMHLACYK----------FWYRCPICRKSMEDMREYFSQM 127
            SRYYC IC LFDDAP K IYHCPYCN+CRLG+GLG D+         V+++A  H CL K+LE DCPIC+  LF ST + KGLRCGH +HL CY+          FW+RCP+CRKSM+DM EYFSQ+
Sbjct:   67 SRYYCAICKLFDDAPGKAIYHCPYCNLCRLGRGLGRDFRHCMKCNCCVALSAEPHRCLPKALEGDCPICSEPLFVSTREYKGLRCGHLLHLDCYQAYVAQGGEQLFWFRCPVCRKSMDDMTEYFSQL 193          
BLAST of mRNA_Ecto-sp9_F_contig872.16906.1 vs.
Match: Hypothetical (protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1GIX4_CYCTE)

HSP 1 Score: 155 bits (391), Expect = 1.010e-43
Identity = 64/124 (51.61%), Postives = 88/124 (70.97%), Query Frame = 0
Query:    9 RASRYYCGICHLFDDAPEKDIYHCPYCNVCRLGKGLGVDYXXXXXXXXXVSMNAPSHTCLSKSLESDCPICNNSLFTSTSQVKGLRCGHFMHLACYKFW-----YRCPICRKSMEDMREYFSQM 127
            R ++YYC ICHL+DD PEK IYHCP+CNVCR G+GLG+DY         VS+    H C+ + L++ CPIC+ S+F ST  +KGL+CGH +HL+C+  +     Y CP+C+KS+EDMREYF+ +
Sbjct:  147 RFAKYYCQICHLYDDDPEKQIYHCPFCNVCRSGRGLGIDYRHCMRCNACVSLEDTDHHCIPQRLQATCPICHESMFQSTEPLKGLKCGHVLHLSCFTRYMRGQSYTCPLCKKSVEDMREYFTML 270          
BLAST of mRNA_Ecto-sp9_F_contig872.16906.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4R513_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.590e-42
Identity = 62/120 (51.67%), Postives = 87/120 (72.50%), Query Frame = 0
Query:   11 SRYYCGICHLFDDAPEKDIYHCPYCNVCRLGKGLGVDYXXXXXXXXXVSMNAPSHTCLSKSLESDCPICNNSLFTSTSQVKGLRCGHFMHLACYKFW-----YRCPICRKSMEDMREYFS 125
            S+Y C IC+L+DD P K+IYHCP+CNVCR GKGLGVDY         VS+   +H C+ +SL+ +CPIC+ S+F ST  ++GL+CGH MHL+C+  +     Y CP+C+KS+EDM++YF+
Sbjct:  100 SKYSCNICNLYDDGPNKNIYHCPFCNVCRSGKGLGVDYRHCMRCNACVSLADDTHHCIPQSLQGNCPICHESMFQSTEPLRGLKCGHVMHLSCFTMYMRAQSYTCPLCKKSIEDMKDYFA 219          
BLAST of mRNA_Ecto-sp9_F_contig872.16906.1 vs.
Match: Uncharacterized (protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJY0_9RHOD)

HSP 1 Score: 154 bits (390), Expect = 1.990e-41
Identity = 79/132 (59.85%), Postives = 97/132 (73.48%), Query Frame = 0
Query:    2 SPCPTRTRASRYYCGICHLFDDAPEKDIYHCPYCNVCRLGKGLGVDYXXXXXXXXXVSM-NAPSHTCLSKSLESDCPICNNSLFTSTSQVKGLRCGHFMHLACYKFW----YRCPICRKSMEDMREYFSQMV 128
            S C    R +RY C IC L+DDAP +DIYHC YCNVCR+GKGLG+DYXXXXXXXXX+S  NA +H C+  SLESDCP+C   LFTST+ +K LRCGH MH +CY+ +    YRCP+C+KS+ DM  YF   +
Sbjct:  462 SCCSCHERFARYVCLICKLYDDAPNRDIYHCGYCNVCRVGKGLGIDYXXXXXXXXXMSTANAKNHRCVEHSLESDCPVCGEYLFTSTNPIKFLRCGHLMHASCYRRYASTDYRCPVCKKSLADMSAYFEAQL 593          
BLAST of mRNA_Ecto-sp9_F_contig872.16906.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3SMK8_9STRA)

HSP 1 Score: 150 bits (379), Expect = 3.000e-41
Identity = 62/120 (51.67%), Postives = 87/120 (72.50%), Query Frame = 0
Query:   11 SRYYCGICHLFDDAPEKDIYHCPYCNVCRLGKGLGVDYXXXXXXXXXVSMNAPSHTCLSKSLESDCPICNNSLFTSTSQVKGLRCGHFMHLACYKFW-----YRCPICRKSMEDMREYFS 125
            S+Y C IC+L+DD P K+IYHCP+CNVCR GKGLGVDY         VS+   +H C+ +SL+ +CPIC+ S+F ST  ++GL+CGH MHL+C+  +     Y CP+C+KS+EDM++YF+
Sbjct:  230 SKYSCNICNLYDDGPNKNIYHCPFCNVCRSGKGLGVDYRHCMRCNACVSLADDTHHCIPQSLQGNCPICHESMFQSTEPLRGLKCGHVMHLSCFTMYMRAQSYTCPLCKKSIEDMKDYFA 349          
BLAST of mRNA_Ecto-sp9_F_contig872.16906.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAG1_9STRA)

HSP 1 Score: 146 bits (368), Expect = 7.600e-40
Identity = 67/134 (50.00%), Postives = 92/134 (68.66%), Query Frame = 0
Query:    7 RTRA--SRYYCGICHLFDDAPEKDIYHCPYCNVCRLGKGLGVDYXXXXXXXXXVSMN-APSHTCLSKSLESDCPICNNSLFTSTSQVKGLRCGHFMHLACYK----FWYRCPICRKSMEDMREYFSQMVSGRSH 133
            RT A   +YYC +C L+D++ +++IYHCPYCNVCR+GKGLGVDY         V M    +H C+S+ LE +CPIC ++L  ST+ +KGL CGH MHL CY+    + Y CPIC K+M+DMR+YFS++    +H
Sbjct:  178 RTHAVLGKYYCNVCKLWDNSLDREIYHCPYCNVCRVGKGLGVDYRHCMRCNCCVEMREGVTHRCISQVLEGNCPICADTLRFSTADLKGLPCGHTMHLECYRQYRAYSYTCPICLKTMDDMRDYFSRLDQAAAH 311          
BLAST of mRNA_Ecto-sp9_F_contig872.16906.1 vs.
Match: Zinc (finger protein-like protein n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S0H4_9CHLO)

HSP 1 Score: 150 bits (379), Expect = 1.520e-39
Identity = 75/125 (60.00%), Postives = 96/125 (76.80%), Query Frame = 0
Query:    8 TRASRYYCGICHLFDDAPEKDIYHCPYCNVCRLGKGLGVDYXXXXXXXXXVSMNA-PSHTCLSKSLESDCPICNNSLFTSTSQVKGLRCGHFMHLACYKFW----YRCPICRKSMEDMREYFSQM 127
            TR ++YYCGICHLFDDAP++DIYHCP CNVCR GKGLG+D+XXXXXXXXX+S++    HTC  +SLE++C +C+  LF S + +K L CGHFMH +C++ +    Y CPIC KSM DMR YF  +
Sbjct:  666 TRMAKYYCGICHLFDDAPDRDIYHCPSCNVCRRGKGLGIDFXXXXXXXXXMSISLFKKHTCRERSLEANCAVCHEYLFDSPTPIKELPCGHFMHSSCFQMYTHYNYTCPICSKSMGDMRVYFQML 790          
BLAST of mRNA_Ecto-sp9_F_contig872.16906.1 vs.
Match: Hypothetical (protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VUG9_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.700e-39
Identity = 62/120 (51.67%), Postives = 87/120 (72.50%), Query Frame = 0
Query:   11 SRYYCGICHLFDDAPEKDIYHCPYCNVCRLGKGLGVDYXXXXXXXXXVSMNAPSHTCLSKSLESDCPICNNSLFTSTSQVKGLRCGHFMHLACYKFW-----YRCPICRKSMEDMREYFS 125
            S+Y C IC+L+DD P K+IYHCP+CNVCR GKGLGVDY         VS+   +H C+ +SL+ +CPIC+ S+F ST  ++GL+CGH MHL+C+  +     Y CP+C+KS+EDM++YF+
Sbjct:  967 SKYSCNICNLYDDGPNKNIYHCPFCNVCRSGKGLGVDYRHCMRCNACVSLADDTHHCIPQSLQGNCPICHESMFQSTEPLRGLKCGHVMHLSCFTMYMRAQSYTCPLCKKSIEDMKDYFA 1086          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig872.16906.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.230e-6888.15protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
Zinc8.990e-5161.59ion binding protein n=1 Tax=Tribonema minus TaxID=... [more]
Hypothetical1.610e-5059.06protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
Hypothetical1.010e-4351.61protein n=1 Tax=Cyclophora tenuis TaxID=216820 Rep... [more]
Hypothetical1.590e-4251.67protein n=1 Tax=Ditylum brightwellii TaxID=49249 R... [more]
Uncharacterized1.990e-4159.85protein n=1 Tax=Cyanidiococcus yangmingshanensis T... [more]
Hypothetical3.000e-4151.67protein n=1 Tax=Ditylum brightwellii TaxID=49249 R... [more]
Hypothetical7.600e-4050.00protein (Fragment) n=1 Tax=Rhizochromulina marina ... [more]
Zinc1.520e-3960.00finger protein-like protein n=1 Tax=Tetraselmis sp... [more]
Hypothetical1.700e-3951.67protein n=3 Tax=Ditylum brightwellii TaxID=49249 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 76..113
e-value: 1.8E-5
score: 34.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 76..114
score: 11.737
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10coord: 69..125
e-value: 1.8E-8
score: 35.7
NoneNo IPR availablePANTHERPTHR21319RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1coord: 11..125
NoneNo IPR availablePANTHERPTHR21319:SF39coord: 11..125
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 75..118
IPR017921Zinc finger, CTCHY-typePROSITEPS51270ZF_CTCHYcoord: 10..75
score: 26.543
IPR037275Zinc finger, CTCHY-type superfamilySUPERFAMILY161245Zinc hairpin stackcoord: 12..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig872contigEcto-sp9_F_contig872:26744..28230 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig872.16906.1mRNA_Ecto-sp9_F_contig872.16906.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig872 26744..28230 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig872.16906.1 ID=prot_Ecto-sp9_F_contig872.16906.1|Name=mRNA_Ecto-sp9_F_contig872.16906.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=135bp
TSPCPTRTRASRYYCGICHLFDDAPEKDIYHCPYCNVCRLGKGLGVDYYH
CMTCNACVSMNAPSHTCLSKSLESDCPICNNSLFTSTSQVKGLRCGHFMH
LACYKFWYRCPICRKSMEDMREYFSQMVSGRSHG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017921Znf_CTCHY
IPR037275Znf_CTCHY_sf