prot_Ecto-sp9_F_contig872.16904.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig872.16904.1
Unique Nameprot_Ecto-sp9_F_contig872.16904.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length301
Homology
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BLAST of mRNA_Ecto-sp9_F_contig872.16904.1 vs.
Match: Ankyrin (repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUW9_ECTSI)

HSP 1 Score: 479 bits (1232), Expect = 7.220e-166
Identity = 253/278 (91.01%), Postives = 262/278 (94.24%), Query Frame = 0 
Query:   23 GADVHPVAAGGITPLSISCSSASVAPVRILLTELGMNPMTPMNHGCLLQVILDLCQTSPVLENFLQLQATPEALRRRRLDIAELLISSGIDLEVRHLGDSAVHMAAESGSRRLMVALLRAGASTSSVGKASDSIFGTALSRAAAHSRPEVAHLLLQAGAHEKSLDQVGRDALCVAGTLVSAVPATPEEELRRRLVAVAHVLHRGPAFRAMSWRWPSAAATXXXXAVVEDNGSRTSLPSGALSGLALIPRHGKRGPRLRAAMWSSVSGNDVNEARDSGT 300
            G DVHPVAAGGITPLSISCSSASVAPVRILLTELGMNP+TPMNHGCLLQVIL LCQTSPVLE+FLQLQATPEAL+RRRLDIAELLISSGIDLEVRHLGDSAVHMAA SGSRRLMVALLRAGASTSSVGKA+D+IFGTALSRAAAHSRPEVAHLLLQAGAHE +LDQVGRDALCVAGTLVS++PATPEEELRRRL+AVAHVLHRGPAFRAMSWRWPSAAAT     VVEDNGSRTSLP GALSGL LIPRHGKRGPRLRAAMWS    NDVNE RDSGT
Sbjct:  223 GTDVHPVAAGGITPLSISCSSASVAPVRILLTELGMNPVTPMNHGCLLQVILGLCQTSPVLESFLQLQATPEALKRRRLDIAELLISSGIDLEVRHLGDSAVHMAAGSGSRRLMVALLRAGASTSSVGKANDNIFGTALSRAAAHSRPEVAHLLLQAGAHENALDQVGRDALCVAGTLVSSMPATPEEELRRRLLAVAHVLHRGPAFRAMSWRWPSAAATTTAATVVEDNGSRTSLPLGALSGLTLIPRHGKRGPRLRAAMWS----NDVNEVRDSGT 496
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig872.16904.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Ankyrin7.220e-16691.01repeat protein n=1 Tax=Ectocarpus siliculosus TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 119..148
e-value: 0.89
score: 18.6
coord: 156..186
e-value: 480.0
score: 7.4
coord: 32..62
e-value: 1900.0
score: 2.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 119..151
score: 9.725
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..202
e-value: 1.6E-24
score: 88.4
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 2..197
NoneNo IPR availablePANTHERPTHR24189FAMILY NOT NAMEDcoord: 101..187
NoneNo IPR availablePANTHERPTHR24189:SF54coord: 101..187
IPR033379Histidine acid phosphatase active sitePROSITEPS00616HIS_ACID_PHOSPHAT_1coord: 263..277
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..197
score: 16.839

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig872contigEcto-sp9_F_contig872:13796..15842 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig872.16904.1mRNA_Ecto-sp9_F_contig872.16904.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig872 13796..15842 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig872.16904.1 ID=prot_Ecto-sp9_F_contig872.16904.1|Name=mRNA_Ecto-sp9_F_contig872.16904.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=301bp
STPFAVATVQKQFDAMRLLARRGADVHPVAAGGITPLSISCSSASVAPVR
ILLTELGMNPMTPMNHGCLLQVILDLCQTSPVLENFLQLQATPEALRRRR
LDIAELLISSGIDLEVRHLGDSAVHMAAESGSRRLMVALLRAGASTSSVG
KASDSIFGTALSRAAAHSRPEVAHLLLQAGAHEKSLDQVGRDALCVAGTL
VSAVPATPEEELRRRLVAVAHVLHRGPAFRAMSWRWPSAAATTTAAAVVE
DNGSRTSLPSGALSGLALIPRHGKRGPRLRAAMWSSVSGNDVNEARDSGT
*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR033379Acid_Pase_AS
IPR020683Ankyrin_rpt-contain_dom