prot_Ecto-sp9_F_contig8702.16890.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8702.16890.1
Unique Nameprot_Ecto-sp9_F_contig8702.16890.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length657
Homology
BLAST of mRNA_Ecto-sp9_F_contig8702.16890.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P4_ECTSI)

HSP 1 Score: 418 bits (1075), Expect = 2.500e-136
Identity = 253/325 (77.85%), Postives = 261/325 (80.31%), Query Frame = 0
Query:   88 KGRKNGRGRESPKVPVRRMTRGTSNLPDQKRLYVFMAKKKGWKYAGHGWSVVGPENGCEPLEEAELPQYVVDRPELLAEYNEYLKGKEAGDSCSPVARKPREGEQRDDGXXXXXXXXXXXXXVGEEEGAGTPASLGHTGGAGATSCKPVRTTRGQLKGTAGLQILDQQSLTNFLREIMGWEYAPSSWETMIKPDEGKRMGVLELEEYVRSRPRLLQQFTEWERSKAKRKAQPAAAAVRRQSAPLPKPEERPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPDPDMLSDIEAYRFLRDLGWGYQGYGHLVDPEEGAEPVEKEK 412
            KGRKNGRGRESPKVPVRRMTRGTSNLPDQKRLY FMAKKKGW+YAGHGWSVVGPENGCEPLEEAELPQYVVDRPELLAEYNEYLKGKE                                                           PVRTTRG+LKGTAGLQILDQQSLTNFLRE++GWEYAPSSWETM KP EGKRMGVLELEEYVRSRPRLL+QFT+WERSKA+R AQPAAAA+RRQSAPLPKPEERPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXX PDPDMLSDIEAYRFLRDLGWGYQGYGHLVDPEEGAEPVEKEK
Sbjct:  241 KGRKNGRGRESPKVPVRRMTRGTSNLPDQKRLYAFMAKKKGWRYAGHGWSVVGPENGCEPLEEAELPQYVVDRPELLAEYNEYLKGKE-----------------------------------------------------------PVRTTRGRLKGTAGLQILDQQSLTNFLREVVGWEYAPSSWETMTKPGEGKRMGVLELEEYVRSRPRLLKQFTKWERSKARRTAQPAAAALRRQSAPLPKPEERPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDPDMLSDIEAYRFLRDLGWGYQGYGHLVDPEEGAEPVEKEK 506          
BLAST of mRNA_Ecto-sp9_F_contig8702.16890.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6X0_9PHAE)

HSP 1 Score: 362 bits (930), Expect = 1.830e-109
Identity = 237/326 (72.70%), Postives = 245/326 (75.15%), Query Frame = 0
Query:  152 ELPQYVVDRPELLAEYNEYLKGKEAGDSCSPVARKPREGEQRDDGXXXXXXXXXXXXXV-----------------GEEEG---AGTPASLGHTGGAGATSCKPVRTTRGQLKGTAGLQILDQQSLTNFLREIMGWEYAPSSWETMIKPDEGKRMGVLELEEYVRSRPRLLQQFTEWE-RSKAKRKAQPAAAAV-------RRQSAPLPKPEERPAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPPDPDMLSDIEAYRFLRDLGWGYQGYGHLVDPEEGAEPVEKEKLAEHILAHPALKRQSKQWKAGLANEANRHRKEREAAE 449
            +LPQYVVDRPELLAEYNEYL GKEAGDSCSPVARKPREGEQRDDG  XXXXXXXXXXX                  GE      AGTPASLGH GGAG TSCKP RTTRGQLKG AGLQILDQQSLTNFLREIMGWEYAPSSW+TMIKPDEGKRMG LE+   V +       F  W  R+KA                  RRQSAPL KPEERPA XXXXXXXXXXXXXXX    X         PPDPDMLSDIEAYRFLR+LGWGYQGYGHLVDPEEGA+PVEKEKLAEHILAH ALKRQSKQWKAGLANEANR+RKEREAAE
Sbjct:  579 QLPQYVVDRPELLAEYNEYLAGKEAGDSCSPVARKPREGEQRDDGDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEXXXXXXAGTPASLGHAGGAGVTSCKPARTTRGQLKGAAGLQILDQQSLTNFLREIMGWEYAPSSWDTMIKPDEGKRMGALEMN--VVAAEGAFMCFHAWPLRAKAAXXXXXXXXXXXXXXXXXRRQSAPLSKPEERPAXXXXXXXXXXXXXXXXSTAGXARTTRSKSAPPDPDMLSDIEAYRFLRELGWGYQGYGHLVDPEEGAKPVEKEKLAEHILAHTALKRQSKQWKAGLANEANRYRKEREAAE 902          
BLAST of mRNA_Ecto-sp9_F_contig8702.16890.1 vs.
Match: PHD-type (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3P5_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 1.850e-27
Identity = 58/58 (100.00%), Postives = 58/58 (100.00%), Query Frame = 0
Query:  599 MKSILMHSLTIQKLGMRLVWKFLNDREGWKFRRGRGLEPSFLYYQTDRPMVTFPNQGE 656
            MKSILMHSLTIQKLGMRLVWKFLNDREGWKFRRGRGLEPSFLYYQTDRPMVTFPNQGE
Sbjct:    1 MKSILMHSLTIQKLGMRLVWKFLNDREGWKFRRGRGLEPSFLYYQTDRPMVTFPNQGE 58          
BLAST of mRNA_Ecto-sp9_F_contig8702.16890.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEG7_9PHAE)

HSP 1 Score: 99.0 bits (245), Expect = 1.150e-17
Identity = 42/44 (95.45%), Postives = 44/44 (100.00%), Query Frame = 0
Query:  614 MRLVWKFLNDREGWKFRRGRGLEPSFLYYQTDRPMVTFPNQGEV 657
            MRLVWKFLNDREGWKFRRGRGLEPSFLYY+TDRPMVTFPNQGE+
Sbjct:    1 MRLVWKFLNDREGWKFRRGRGLEPSFLYYRTDRPMVTFPNQGEL 44          
BLAST of mRNA_Ecto-sp9_F_contig8702.16890.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBG0_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 3.460e-10
Identity = 39/90 (43.33%), Postives = 51/90 (56.67%), Query Frame = 0
Query:  111 SNLPDQKRLYVFMAKKKGWKYAGHGWSVVGPENGC-----EPLEEAELPQYVVDRPELLAEYNEYLKGKEAGDSCSPVARKPREGEQRDD 195
            S LPD++RL+ F+   KGW++ G GW+V GPE G        +E AELPQYVV  P LLAEY E+ + +  G          R  E+R D
Sbjct:   67 SKLPDERRLWKFLEGVKGWRFTGSGWTVCGPEGGGGGDSGSSMEAAELPQYVVSHPSLLAEYKEWQQRQADGHEQEKPQESTRPEEKRQD 156          
BLAST of mRNA_Ecto-sp9_F_contig8702.16890.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLY1_ECTSI)

HSP 1 Score: 70.9 bits (172), Expect = 4.670e-9
Identity = 33/60 (55.00%), Postives = 42/60 (70.00%), Query Frame = 0
Query:  111 SNLPDQKRLYVFMAKKKGWKYAGHGWSVVGPENGC---EPLEEAELPQYVVDRPELLAEY 167
            S LPD++RL+ F+   KGW++ G GW+V GPE G      +E AELPQYVV +P LLAEY
Sbjct:   69 SKLPDERRLWKFLEGVKGWRFTGSGWTVCGPEGGGGSGSSMEAAELPQYVVSQPSLLAEY 128          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8702.16890.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
Uncharacterized2.500e-13677.85protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.830e-10972.70protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 131... [more]
PHD-type1.850e-27100.00domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Uncharacterized1.150e-1795.45protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.460e-1043.33protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized4.670e-955.00protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 431..492
NoneNo IPR availableCOILSCoilCoilcoord: 653..657
NoneNo IPR availableCOILSCoilCoilcoord: 1..94

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8702contigEcto-sp9_F_contig8702:631..5880 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8702.16890.1mRNA_Ecto-sp9_F_contig8702.16890.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8702 631..5880 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8702.16890.1 ID=prot_Ecto-sp9_F_contig8702.16890.1|Name=mRNA_Ecto-sp9_F_contig8702.16890.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=657bp
QQEEEEEEEEEEEEEEEEKEAEEDQEVREEVVVVEQEEEEEEEEEEEEEE
EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEKGRKNGRGRESPK
VPVRRMTRGTSNLPDQKRLYVFMAKKKGWKYAGHGWSVVGPENGCEPLEE
AELPQYVVDRPELLAEYNEYLKGKEAGDSCSPVARKPREGEQRDDGDEEE
EEEEEEEEDVGEEEGAGTPASLGHTGGAGATSCKPVRTTRGQLKGTAGLQ
ILDQQSLTNFLREIMGWEYAPSSWETMIKPDEGKRMGVLELEEYVRSRPR
LLQQFTEWERSKAKRKAQPAAAAVRRQSAPLPKPEERPAAAAVRRRQSAP
LVPERSTAGGARTTRSKSAPPDPDMLSDIEAYRFLRDLGWGYQGYGHLVD
PEEGAEPVEKEKLAEHILAHPALKRQSKQWKAGLANEANRHRKEREAAER
ELARERKRRAVAKRAEARLKKAADARERREKEKAKKLLLKKKRKPSGGGR
GTGAGAKGGGKKGATKAGPRKKSAAPAAKSKSKPAAQDDPSDEEEEEEEE
EEEGGESGSSEEESEESSSSGSSSSSSSSSSEDEESGSGEESEIDEDEMK
SILMHSLTIQKLGMRLVWKFLNDREGWKFRRGRGLEPSFLYYQTDRPMVT
FPNQGEV
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