prot_Ecto-sp9_F_contig87.16878.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig87.16878.1
Unique Nameprot_Ecto-sp9_F_contig87.16878.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length265
Homology
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BLAST of mRNA_Ecto-sp9_F_contig87.16878.1 vs.
Match: Ankyrin (repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMV4_ECTSI)

HSP 1 Score: 357 bits (916), Expect = 6.310e-122
Identity = 260/264 (98.48%), Postives = 261/264 (98.86%), Query Frame = 0 
Query:    1 MPASSKETGIDIHRAADRGTFRDVCKYVEIGGDVNARDKSQWTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVVKELVSATPSPALQSKTRLGQTXXXXXXXXXXXXXXXXXXAAGADTTLKDAHGRAPGEDFHETVATPLKVAVGAALRAANPIVTSSPSVSQDEVGELKRRVKKLEDAVAALQAERFGANVASLGHAPTDPLSNPMVALAPPATVSAVTAAGLVAPAPANGGGLLTGAEDAKRRKV 264
            MPASSKETGIDIHRAADRGTFRDVCKYVEIGGDVNARDKSQWTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVVKELVSATPSPALQSKTRLGQTXXXXXXXXXXXXXXXXXXAAGADTTLKDAHGRAPGEDFHETVATPLKVAVGAALRAANPIV SSPSVSQDEVGELKRRVKKLEDAVAALQAERFGA +ASLG APTDPLSNPMVALAPPATVSAVTAAGLVAPAPANGGGLLTGAEDAKRRKV
Sbjct:    1 MPASSKETGIDIHRAADRGTFRDVCKYVEIGGDVNARDKSQWTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVVKELVSATPSPALQSKTRLGQTXXXXXXXXXXXXXXXXXXAAGADTTLKDAHGRAPGEDFHETVATPLKVAVGAALRAANPIVMSSPSVSQDEVGELKRRVKKLEDAVAALQAERFGATLASLGPAPTDPLSNPMVALAPPATVSAVTAAGLVAPAPANGGGLLTGAEDAKRRKV 264
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BLAST of mRNA_Ecto-sp9_F_contig87.16878.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KHB3_9PHAE)

HSP 1 Score: 348 bits (892), Expect = 1.000e-114
Identity = 257/264 (97.35%), Postives = 258/264 (97.73%), Query Frame = 0 
Query:    1 MPASSKETGIDIHRAADRGTFRDVCKYVEIGGDVNARDKSQWTPLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVVKELVSATPSPALQSKTRLGQTXXXXXXXXXXXXXXXXXXAAGADTTLKDAHGRAPGEDFHETVATPLKVAVGAALRAANPIVTSSPSVSQDEVGELKRRVKKLEDAVAALQAERFGANVASLGHAPTDPLSNPMVALAPPATVSAVTAAGLVAPAPANGGGLLTGAEDAKRRKV 264
            MPASSKETGIDIHRAADRGTFRDVCKYVEIGGDVNARDKSQWTP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVVKELVSATPSPALQSKTRLGQTXXXXXXXXXXXXXXXXXXAAGADTTLKDAHGRAPGEDFHETVATPLKVAVGAALRAANPIVTS+PSVSQDEVGELKRRVKKLEDAVAALQAERFGAN A LG APTDPLSNPM ALAPPATVSAVTAAGLVAPAPANGG LLTGAEDAKRRKV
Sbjct:  253 MPASSKETGIDIHRAADRGTFRDVCKYVEIGGDVNARDKSQWTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAVVKELVSATPSPALQSKTRLGQTXXXXXXXXXXXXXXXXXXAAGADTTLKDAHGRAPGEDFHETVATPLKVAVGAALRAANPIVTSAPSVSQDEVGELKRRVKKLEDAVAALQAERFGANAALLGPAPTDPLSNPMAALAPPATVSAVTAAGLVAPAPANGG-LLTGAEDAKRRKV 515
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig87.16878.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Ankyrin6.310e-12298.48repeat protein n=1 Tax=Ectocarpus siliculosus TaxI... [more]
Uncharacterized1.000e-11497.35protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 183..203
NoneNo IPR availablePANTHERPTHR24126FAMILY NOT NAMEDcoord: 12..145
coord: 75..163
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 40..69
e-value: 3.8E-5
score: 33.1
coord: 73..102
e-value: 0.003
score: 26.8
coord: 108..137
e-value: 5.3E-4
score: 29.3
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 108..140
score: 12.609
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 40..72
score: 11.594
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 75..139
e-value: 3.0E-11
score: 43.7
coord: 13..70
e-value: 1.1E-7
score: 32.4
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 12..145
score: 33.553
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 2..204
e-value: 2.2E-39
score: 137.5
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 12..144

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig87contigEcto-sp9_F_contig87:4262..8773 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig87.16878.1mRNA_Ecto-sp9_F_contig87.16878.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig87 4112..8879 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig87.16878.1 ID=prot_Ecto-sp9_F_contig87.16878.1|Name=mRNA_Ecto-sp9_F_contig87.16878.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=265bp
MPASSKETGIDIHRAADRGTFRDVCKYVEIGGDVNARDKSQWTPLHRCAR
KGHTDACKFLLQHGADVTLKTMELWTPLHCACVGGHPAVVKELVSATPSP
ALQSKTRLGQTPLYLAAYWGHLHSVRELLAAGADTTLKDAHGRAPGEDFH
ETVATPLKVAVGAALRAANPIVTSSPSVSQDEVGELKRRVKKLEDAVAAL
QAERFGANVASLGHAPTDPLSNPMVALAPPATVSAVTAAGLVAPAPANGG
GLLTGAEDAKRRKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR020683Ankyrin_rpt-contain_dom
IPR036770Ankyrin_rpt-contain_sf