prot_Ecto-sp9_F_contig8685.16869.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig8685.16869.1
Unique Nameprot_Ecto-sp9_F_contig8685.16869.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length166
Homology
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BLAST of mRNA_Ecto-sp9_F_contig8685.16869.1 vs.
Match: U3 (small nucleolar ribonucleoprotein protein MPP10 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTX9_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 6.670e-12
Identity = 39/46 (84.78%), Postives = 41/46 (89.13%), Query Frame = 0 
Query:  120 VGGNFSTSAKFFSKLQESVIASVKSAGKGMEGDAKDTSKKAAQLRL 165
             G  FSTSAKFFS+LQESV ASVKS GKGM+GDAKDTSKKAAQLRL
Sbjct:  568 TGREFSTSAKFFSQLQESVTASVKSTGKGMDGDAKDTSKKAAQLRL 613
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig8685.16869.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
U36.670e-1284.78small nucleolar ribonucleoprotein protein MPP10 n=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig8685contigEcto-sp9_F_contig8685:233..3029 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig8685.16869.1mRNA_Ecto-sp9_F_contig8685.16869.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig8685 218..3326 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig8685.16869.1 ID=prot_Ecto-sp9_F_contig8685.16869.1|Name=mRNA_Ecto-sp9_F_contig8685.16869.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=166bp
MPVPRSWRASYEACSPYVARKCEAHWKPFGPLDTRNGGAEKQSSWKFRRW
GRNEPGGSKTVTLVEEGRQAESRVTGGSGPEAGVQAQSGSREQVRDGRDD
EGHPGRQESHHRHRGRGSQVGGNFSTSAKFFSKLQESVIASVKSAGKGME
GDAKDTSKKAAQLRL*
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