prot_Ecto-sp9_F_contig1176.1465.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig1176.1465.1
Unique Name	prot_Ecto-sp9_F_contig1176.1465.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	987

Homology

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BLAST of mRNA_Ecto-sp9_F_contig1176.1465.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH1_9PHAE)

HSP 1 Score: 750 bits (1937), Expect = 2.640e-260
Identity = 473/568 (83.27%), Postives = 484/568 (85.21%), Query Frame = 0

Query:    1 MSLRELLGLNDAEHRPQQICAPPATGLNLQRSLVPAGAAATGPARSRSRSSSRESGHTARRLNTGESWREEEQRRIQRMDPGGRGGGGAGHVPDGCGVATSAFAHRQQQPPASGSEAHGQQGGVVWRXXXXDWATGASSRDQLNREFXXXXXXXXXXXXXXLEARHRWEQHHRQIKEGQEKQGQQFLSEVARKYQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRESASGVGRVSHNPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDKKKEGEAGNKQELVALKAGHGVAVDHLNMLVGLVEEMTQKWERQLDDGGEGGWDDDMLAREGTEAMNAIRSAALEGPGLPIGVIDWPGVASSLWRRHSVAWSPQLCQGLWKFVAYGDVGAAMNALPRAGETLNGAWTRQDLLYDSDTEALSVNPLFISKKDTTSKVPRWGRSRLNPAGKREWSLAEKARSEEPLRRAPMLMSGSIDLRHSPDRPGRVGKQAAGRASDEDQLVPLCTIAARPTFARTRKRPAKGIARPRDPLSPRSAKAAAEIAQGEARV 568
            MSLRELLGLNDAE RPQQICAPPATGLNLQRSLVPAG AA+GPARSRS SSSRESG TARRLNTGESWREEE RRIQRMDPGGRGGGG+G VPDGCGVATSAFAHRQQQPPASGSEAHGQQGGVVWR    DWATGAS+RDQLNREF   XXXXXXXXXXX                                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX RESASGVGR+SHNPS      XXXXXXXXXXXXXXXXXX                    DK  EG+AGNKQELVALKAGHGVAVDHLNMLV LVEEMT KWERQLDDGGEGGWDD MLAREGTEA+ AIRSAALEGPGLPIGVIDWPGVASSLWRRHSVAWSPQLCQGLWKFVAYGDVGAAMNALPRAGETLNGAWTRQDLLYDSDTEALSVNPLFISK+DTTSK+PRWGRSR NPAGKREWSLAEKARSEEPLRRAPMLMSGSIDLRHSPDRPGRVGKQAAGRASDEDQLVPLCTIAARPTF RTRKRPAKGIARPRDP SPRSAKAAAEIA+ EA++
Sbjct:    1 MSLRELLGLNDAEPRPQQICAPPATGLNLQRSLVPAGGAASGPARSRSSSSSRESGDTARRLNTGESWREEEHRRIQRMDPGGRGGGGSGQVPDGCGVATSAFAHRQQQPPASGSEAHGQQGGVVWRGGGVDWATGASNRDQLNREFLLQXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRESASGVGRISHNPSPSPPPLXXXXXXXXXXXXXXXXXXQENKTLKKEQHQRRKEGAAADKTHEGQAGNKQELVALKAGHGVAVDHLNMLVSLVEEMTHKWERQLDDGGEGGWDDGMLAREGTEAVKAIRSAALEGPGLPIGVIDWPGVASSLWRRHSVAWSPQLCQGLWKFVAYGDVGAAMNALPRAGETLNGAWTRQDLLYDSDTEALSVNPLFISKEDTTSKIPRWGRSRSNPAGKREWSLAEKARSEEPLRRAPMLMSGSIDLRHSPDRPGRVGKQAAGRASDEDQLVPLCTIAARPTFVRTRKRPAKGIARPRDPPSPRSAKAAAEIAEAEAQM 565

[Close]

BLAST of mRNA_Ecto-sp9_F_contig1176.1465.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC1_ECTSI)

HSP 1 Score: 72.8 bits (177), Expect = 2.460e-12
Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 0

Query:  318 MLVGLVEEMTQKWERQLDDGGEGGWDDDMLAREGT 352
            MLVGLVEEMT KWERQLDDGGEGGWDDDMLAREGT
Sbjct:    1 MLVGLVEEMTHKWERQLDDGGEGGWDDDMLAREGT 35

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig1176.1465.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig1176.1465.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
Uncharacterized	2.640e-260	83.27	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	2.460e-12	97.14	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 780..800
None	No IPR available	COILS	Coil	Coil	coord: 260..280
None	No IPR available	COILS	Coil	Coil	coord: 145..165
None	No IPR available	COILS	Coil	Coil	coord: 187..217
None	No IPR available	PANTHER	PTHR33416	FAMILY NOT NAMED	coord: 154..677

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig1176	contig	Ecto-sp9_F_contig1176:18644..23862 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig1176.1465.1	mRNA_Ecto-sp9_F_contig1176.1465.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig1176 17610..23862 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig1176.1465.1 ID=prot_Ecto-sp9_F_contig1176.1465.1|Name=mRNA_Ecto-sp9_F_contig1176.1465.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=987bp
MSLRELLGLNDAEHRPQQICAPPATGLNLQRSLVPAGAAATGPARSRSRS
SSRESGHTARRLNTGESWREEEQRRIQRMDPGGRGGGGAGHVPDGCGVAT
SAFAHRQQQPPASGSEAHGQQGGVVWRGGGGDWATGASSRDQLNREFLLQ
QQQQQQQHQQQLEARHRWEQHHRQIKEGQEKQGQQFLSEVARKYQQQQQQ
QQQQQQQQQQQQQQQQQHHHQQQLQQHHQRESASGVGRVSHNPSPSPPPL
QQHQHHQQHQKQQQRQRQQEKKTLKKEQHQRRKEGAGADKKKEGEAGNKQ
ELVALKAGHGVAVDHLNMLVGLVEEMTQKWERQLDDGGEGGWDDDMLARE
GTEAMNAIRSAALEGPGLPIGVIDWPGVASSLWRRHSVAWSPQLCQGLWK
FVAYGDVGAAMNALPRAGETLNGAWTRQDLLYDSDTEALSVNPLFISKKD
TTSKVPRWGRSRLNPAGKREWSLAEKARSEEPLRRAPMLMSGSIDLRHSP
DRPGRVGKQAAGRASDEDQLVPLCTIAARPTFARTRKRPAKGIARPRDPL
SPRSAKAAAEIAQGEARVYEERQGMQLLLQQSAADSSATGKQNPKVNRAS
GNAHAAGSPPLAQAGGVGDVAEGPRLQQKKQRNNTTSVERAASEAAKRAE
VWAAASDAAAAAAAAAAAAKGSAAASASTTARWSSHRPPTGGPARGLASV
PQQVEWQSQGDACTADSQGRQHSRPVVSEGSSPAVPPTANLHALHVAANA
VSDGAAGRPPPPSQDPAVEQRRHFPSSSSFSRQQQQHQQHQQQQQQQRQQ
HSYPQPAVPVGPPHPNRPATVTYIHMGGPSPTHGGTVEGANDGNGAVTAA
SNPSRSLRAATGVERAGIGDVRGGGLGTSGGSSNSVGSGGAGVGATAVGG
VGSGGAGVGATAVGGPPTWSRAEEYGATGGGAVPDRPPPQRADVSLAPPS
RFEARPPAPAVSGVTVPGFGTIAAGAILQRPPTSES*