prot_Ecto-sp9_F_contig1176.1463.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1176.1463.1
Unique Nameprot_Ecto-sp9_F_contig1176.1463.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length247
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1176.1463.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9Z1_9PHAE)

HSP 1 Score: 305 bits (781), Expect = 6.500e-94
Identity = 231/274 (84.31%), Postives = 233/274 (85.04%), Query Frame = 0 
Query:    1 MRSGRSLPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGDADSFVSRISDWFMKWKVRPDVVLRGRHENKSKGALSAFWQDYKKVRVDWRARAGMRRDHFELALQHYMRIDGPSRDTCEGRIRYIWETRIRDNSHLGVVDVSCQPAKAKVGKRKPSILAAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXA---------------------------FMQPDGAGGNFGMPGLQQQTAPGSGSSRLFSDGSSAGGAIDPNGMAVG 247
            MRSGRSLPGG XXXXXXXXXXXXXXXXXXXXXXXXXXXXX     D DSFVSRISDWFMKWKVRPDVVLRGRHENKSKGALSAFWQDYKKVRVDWRARAGMRRDHFELALQHYMRIDGPSRDTCEGRIRYIWETRIRDNSHLGVVDVSCQPAKAKVGKRKPSILAAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                              QPDG GG+FGMPGLQQQ AP SGSS+LFSDGSS GGAIDPNGMAVG
Sbjct:    1 MRSGRSLPGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----DTDSFVSRISDWFMKWKVRPDVVLRGRHENKSKGALSAFWQDYKKVRVDWRARAGMRRDHFELALQHYMRIDGPSRDTCEGRIRYIWETRIRDNSHLGVVDVSCQPAKAKVGKRKPSILAAQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMQGKQMLLMQEWVPSDAAPPRVMSACLPLAQPDGGGGHFGMPGLQQQAAPASGSSQLFSDGSSGGGAIDPNGMAVG 269
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BLAST of mRNA_Ecto-sp9_F_contig1176.1463.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLC3_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 5.290e-66
Identity = 97/97 (100.00%), Postives = 97/97 (100.00%), Query Frame = 0 
Query:   59 MKWKVRPDVVLRGRHENKSKGALSAFWQDYKKVRVDWRARAGMRRDHFELALQHYMRIDGPSRDTCEGRIRYIWETRIRDNSHLGVVDVSCQPAKAK 155
            MKWKVRPDVVLRGRHENKSKGALSAFWQDYKKVRVDWRARAGMRRDHFELALQHYMRIDGPSRDTCEGRIRYIWETRIRDNSHLGVVDVSCQPAKAK
Sbjct:    1 MKWKVRPDVVLRGRHENKSKGALSAFWQDYKKVRVDWRARAGMRRDHFELALQHYMRIDGPSRDTCEGRIRYIWETRIRDNSHLGVVDVSCQPAKAK 97
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1176.1463.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized6.500e-9484.31protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.290e-66100.00protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 178..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1176contigEcto-sp9_F_contig1176:2487..4577 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1176.1463.1mRNA_Ecto-sp9_F_contig1176.1463.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1176 2487..4577 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1176.1463.1 ID=prot_Ecto-sp9_F_contig1176.1463.1|Name=mRNA_Ecto-sp9_F_contig1176.1463.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=247bp
MRSGRSLPGGGGGGGGPGAGNSNNKIVVSNKNTTGGGGGNGGNGGDADSF
VSRISDWFMKWKVRPDVVLRGRHENKSKGALSAFWQDYKKVRVDWRARAG
MRRDHFELALQHYMRIDGPSRDTCEGRIRYIWETRIRDNSHLGVVDVSCQ
PAKAKVGKRKPSILAAQQKEDTAAQRLAAQQQQQQQQQQQHFQRQQQQAF
MQPDGAGGNFGMPGLQQQTAPGSGSSRLFSDGSSAGGAIDPNGMAVG
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