prot_Ecto-sp9_F_contig1175.1454.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1175.1454.1
Unique Nameprot_Ecto-sp9_F_contig1175.1454.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length124
Homology
BLAST of mRNA_Ecto-sp9_F_contig1175.1454.1 vs.
Match: Intraflagellar (transpot protein 74 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPE8_ECTSI)

HSP 1 Score: 216 bits (549), Expect = 1.440e-66
Identity = 123/124 (99.19%), Postives = 124/124 (100.00%), Query Frame = 0
Query:    1 MRPGSRGYIGGGLQPPGTGMRMATGQRGGRPMSGRMRTGQVTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGXXXXXXXXXXRQVQDGSFFIGVLRSKMNDVRAELGRLQAEIDRHEK 124
            MRPGSRGY+GGGLQPPGTGMRMATGQRGGRPMSGRMRTGQVTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGXXXXXXXXXXRQVQDGSFFIGVLRSKMNDVRAELGRLQAEIDRHEK
Sbjct:    1 MRPGSRGYVGGGLQPPGTGMRMATGQRGGRPMSGRMRTGQVTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGXXXXXXXXXXRQVQDGSFFIGVLRSKMNDVRAELGRLQAEIDRHEK 124          
BLAST of mRNA_Ecto-sp9_F_contig1175.1454.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU06_9PHAE)

HSP 1 Score: 134 bits (337), Expect = 8.520e-39
Identity = 68/69 (98.55%), Postives = 69/69 (100.00%), Query Frame = 0
Query:    1 MRPGSRGYIGGGLQPPGTGMRMATGQRGGRPMSGRMRTGQVTAGPSREAAYGVALSQEVKVTDRPVTQQ 69
            MRPGSRGY+GGGLQPPGTGMRMATGQRGGRPMSGRMRTGQVTAGPSREAAYGVALSQEVKVTDRPVTQQ
Sbjct:    1 MRPGSRGYVGGGLQPPGTGMRMATGQRGGRPMSGRMRTGQVTAGPSREAAYGVALSQEVKVTDRPVTQQ 69          
BLAST of mRNA_Ecto-sp9_F_contig1175.1454.1 vs.
Match: Intraflagellar (transport protein 74 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE00_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 5.760e-22
Identity = 59/113 (52.21%), Postives = 72/113 (63.72%), Query Frame = 0
Query:   12 GLQPPGTGMRMATGQRGGRPMSGRMRTGQVTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGXXXXXXXXXXRQVQDGSFFIGVLRSKMNDVRAELGRLQAEIDRHEK 124
            G  PPGTG+R  TG R        MRTG      SREAAYGVAL+ EV V +RPVTQQGMSGM+T+           R VQDGSFF+G LR K+ D++ EL +L+AE ++H K
Sbjct:   10 GQMPPGTGLRTGTGMR--------MRTGAAPPTASREAAYGVALTHEVNVDNRPVTQQGMSGMRTS-----QGAGPGRLVQDGSFFLGQLRQKIMDIQRELAKLKAEGEQHTK 109          
BLAST of mRNA_Ecto-sp9_F_contig1175.1454.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2XWW9_HETAK)

HSP 1 Score: 98.6 bits (244), Expect = 1.600e-21
Identity = 59/110 (53.64%), Postives = 75/110 (68.18%), Query Frame = 0
Query:   16 PGTGMRMATGQRGGRPMSG--RMRTGQVTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGXXXXXXXXXXRQVQDGSFFIGVLRSKMNDVRAELGRLQAEIDRHE 123
            PGTGMR A GQRG   M G  R+RTG + AGP   AA GV +   V V+DRPVTQQGMSGMKTAG          RQVQD S++IGVLR+K+ ++  E+ +L+ EI++H+
Sbjct:   21 PGTGMRTAAGQRG---MLGTARLRTG-MAAGPGNVAAVGVGMQTAVNVSDRPVTQQGMSGMKTAGQGPG------RQVQDPSYYIGVLRAKLTEIATEISKLKREINQHQ 120          
BLAST of mRNA_Ecto-sp9_F_contig1175.1454.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CE55_PYTOL)

HSP 1 Score: 90.9 bits (224), Expect = 8.150e-19
Identity = 53/112 (47.32%), Postives = 74/112 (66.07%), Query Frame = 0
Query:   16 PGTGMRMATGQRGGRPMSGRMRTGQ-VTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMK--TAGXXXXXXXXXXRQVQDGSFFIGVLRSKMNDVRAELGRLQAEIDRHEK 124
            PGTG R + G   GRP++GR+ TGQ V A P + A +G++L+ EV V+DRPVTQQGM GM+  TAG          RQVQD SFF+G L +K +++  E+ +L+ EI++  K
Sbjct:   33 PGTGQRSSLGSSAGRPLTGRLGTGQAVPATPGQTAGFGISLNTEVNVSDRPVTQQGMMGMRVGTAGPG--------RQVQDASFFMGKLHAKTSEITTEIEKLRKEIEQDAK 136          
BLAST of mRNA_Ecto-sp9_F_contig1175.1454.1 vs.
Match: Intraflagellar (Transport Protein 72/74 n=9 Tax=Phytophthora TaxID=4783 RepID=D0NIV2_PHYIT)

HSP 1 Score: 90.5 bits (223), Expect = 1.120e-18
Identity = 54/111 (48.65%), Postives = 71/111 (63.96%), Query Frame = 0
Query:   16 PGTGMR-MATGQRGGRPMSGRMRTGQ-VTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGXXXXXXXXXXRQVQDGSFFIGVLRSKMNDVRAELGRLQAEIDRHEK 124
            PGTG R M T   GGRP++GR+ TGQ V A P + A YG++L+ EV V+DRPVTQQGM GM+             RQVQD SFF G L SK  ++ +E+ +LQ E+++  K
Sbjct:   67 PGTGQRGMLTSASGGRPLTGRLGTGQQVPATPGQTAGYGISLNTEVNVSDRPVTQQGMMGMRVGSAGPG------RQVQDASFFKGKLHSKTAEITSEIEKLQREVEQDAK 171          
BLAST of mRNA_Ecto-sp9_F_contig1175.1454.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5M4D3_9STRA)

HSP 1 Score: 90.5 bits (223), Expect = 1.170e-18
Identity = 55/111 (49.55%), Postives = 70/111 (63.06%), Query Frame = 0
Query:   16 PGTGMR-MATGQRGGRPMSGRMRTGQ-VTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGXXXXXXXXXXRQVQDGSFFIGVLRSKMNDVRAELGRLQAEIDRHEK 124
            PGTG R M T   GGRP++GR+ TGQ V A P + A YG++L+ EV V+DRPVTQQGM GM+             RQVQD SFF G L SK  ++  E+ +LQ EI++  K
Sbjct:  405 PGTGQRGMLTSASGGRPLTGRLGTGQQVPATPGQTAGYGISLNTEVNVSDRPVTQQGMMGMRVGSAGPG------RQVQDASFFKGKLHSKTAEITTEIEKLQREIEQDAK 509          
BLAST of mRNA_Ecto-sp9_F_contig1175.1454.1 vs.
Match: Uncharacterized (protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3HB40_PHYRM)

HSP 1 Score: 88.6 bits (218), Expect = 5.590e-18
Identity = 56/115 (48.70%), Postives = 71/115 (61.74%), Query Frame = 0
Query:   18 TGMRMATGQRG-------GRPMSGRMRTGQ-VTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGXXXXXXXXXXRQVQDGSFFIGVLRSKMNDVRAELGRLQAEIDRHEK 124
            TG R  TGQRG       GRP++GR+ TGQ   A P + A +GV+L+ EV V+DRPVTQQGM GM+T            RQVQD SFF G L SK  ++ AE+ +LQ EI++  K
Sbjct:  625 TGARPGTGQRGMLLSASGGRPLTGRLGTGQQAPATPGQTAGFGVSLNTEVNVSDRPVTQQGMMGMRTG----TGSAGPGRQVQDASFFKGKLHSKTAEIAAEVEKLQREIEQDAK 735          
BLAST of mRNA_Ecto-sp9_F_contig1175.1454.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XXK3_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 7.210e-18
Identity = 54/115 (46.96%), Postives = 71/115 (61.74%), Query Frame = 0
Query:   18 TGMRMATGQRG-------GRPMSGRMRTGQ-VTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGXXXXXXXXXXRQVQDGSFFIGVLRSKMNDVRAELGRLQAEIDRHEK 124
            TG+R  TGQRG       GRP++GR+ TGQ   A P + A YG++L+ EV V+DRPVTQQGM GM+             RQVQD SFF G L SK  ++ +E+ +LQ EI++  K
Sbjct:   42 TGVRPGTGQRGMLGSSAGGRPLTGRLGTGQQAPATPGQTAGYGISLNTEVNVSDRPVTQQGMMGMRVG----TGSAGPGRQVQDASFFKGKLHSKTAEITSEIDKLQREIEQDAK 152          
BLAST of mRNA_Ecto-sp9_F_contig1175.1454.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WLW1_9STRA)

HSP 1 Score: 88.2 bits (217), Expect = 7.680e-18
Identity = 54/115 (46.96%), Postives = 71/115 (61.74%), Query Frame = 0
Query:   18 TGMRMATGQRG-------GRPMSGRMRTGQ-VTAGPSREAAYGVALSQEVKVTDRPVTQQGMSGMKTAGXXXXXXXXXXRQVQDGSFFIGVLRSKMNDVRAELGRLQAEIDRHEK 124
            TG+R  TGQRG       GRP++GR+ TGQ   A P + A YG++L+ EV V+DRPVTQQGM GM+             RQVQD SFF G L SK  ++ +E+ +LQ EI++  K
Sbjct:  809 TGVRPGTGQRGMLGSSAGGRPLTGRLGTGQQAPATPGQTAGYGISLNTEVNVSDRPVTQQGMMGMRVG----TGSAGPGRQVQDASFFKGKLHSKTAEITSEIDKLQREIEQDAK 919          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1175.1454.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Intraflagellar1.440e-6699.19transpot protein 74 n=1 Tax=Ectocarpus siliculosus... [more]
Uncharacterized8.520e-3998.55protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Intraflagellar5.760e-2252.21transport protein 74 n=1 Tax=Tribonema minus TaxID... [more]
Hypothetical1.600e-2153.64protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Uncharacterized8.150e-1947.32protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Intraflagellar1.120e-1848.65Transport Protein 72/74 n=9 Tax=Phytophthora TaxID... [more]
Uncharacterized1.170e-1849.55protein n=1 Tax=Phytophthora aleatoria TaxID=24960... [more]
Uncharacterized5.590e-1848.70protein n=1 Tax=Phytophthora ramorum TaxID=164328 ... [more]
Uncharacterized7.210e-1846.96protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID... [more]
Uncharacterized7.680e-1846.96protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 98..124
IPR029602Intraflagellar transport protein 74PANTHERPTHR31432FAMILY NOT NAMEDcoord: 2..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1175contigEcto-sp9_F_contig1175:3469..5097 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1175.1454.1mRNA_Ecto-sp9_F_contig1175.1454.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1175 3469..5195 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1175.1454.1 ID=prot_Ecto-sp9_F_contig1175.1454.1|Name=mRNA_Ecto-sp9_F_contig1175.1454.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=124bp
MRPGSRGYIGGGLQPPGTGMRMATGQRGGRPMSGRMRTGQVTAGPSREAA
YGVALSQEVKVTDRPVTQQGMSGMKTAGGGGGGGGGGGRQVQDGSFFIGV
LRSKMNDVRAELGRLQAEIDRHEK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029602IFT74