prot_Ecto-sp9_F_contig117.1412.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig117.1412.1
Unique Nameprot_Ecto-sp9_F_contig117.1412.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length187
Homology
BLAST of mRNA_Ecto-sp9_F_contig117.1412.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX95_ECTSI)

HSP 1 Score: 356 bits (913), Expect = 5.240e-124
Identity = 183/186 (98.39%), Postives = 186/186 (100.00%), Query Frame = 0
Query:    1 MQSQDPMDNIRSAVEHADKNPSKVVSYSWYLVLVFAAVDILVALINASTNDSSANGSHAASFASVWTLFMVLGVSVAGTVILKKYHTPLAVGTLLGLTTMMSQFMFVLFAVFLALAEYADEPGLATGDRTMAVFSFFLFLLYGLFSFVLGRYRTTVMNTPGTASSNDEGEWQDEPGTDGMAPGTPV 186
            MQSQDPMDNIR+AVEHADKNPSKVVSYSWYLVL+FAAVD+LVALINASTNDSSANGSHAASFASVWTLFMVLGVSVAGTVILKKYHTPLAVGTLLGLTTMMSQFMFVLFAVFLALAEYADEPGLATGDRTMAVFSFFLFLLYGLFSFVLGRYRTTVMNTPGTASSNDEGEWQDEPGTDGMAPGTPV
Sbjct:    1 MQSQDPMDNIRAAVEHADKNPSKVVSYSWYLVLIFAAVDVLVALINASTNDSSANGSHAASFASVWTLFMVLGVSVAGTVILKKYHTPLAVGTLLGLTTMMSQFMFVLFAVFLALAEYADEPGLATGDRTMAVFSFFLFLLYGLFSFVLGRYRTTVMNTPGTASSNDEGEWQDEPGTDGMAPGTPV 186          
BLAST of mRNA_Ecto-sp9_F_contig117.1412.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9F7_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.960e-35
Identity = 70/151 (46.36%), Postives = 99/151 (65.56%), Query Frame = 0
Query:   10 IRSAVEHADKNPSKVVSYSWYLVLVFAAVDILVALINASTNDSS-ANGSHAASFASVWTLFMVLGVSVAGTVILKKYHTPLAVGTLLGLTTMMSQFMFVLFAVFLALAEYADEPGLATGDRTMAVFSFFLFLLYGLFSFVLGRYRTTVMNT 159
            +   +    +NP + V +SW++ ++F    ++V+++ AS N  S A G  AA+F ++W L ++L V V GTVIL+KYHTPLAVG LLGLT+M+SQ +FVLFAVFLAL + +        D  MA F F LF L+ LFS VL ++R TV+ T
Sbjct:   12 LSDVMSDVKRNPGRCVGFSWFVTIIFVLAMVVVSIVTASKNSQSEAIGGDAAAFTALWVLLVLLLVGVTGTVILRKYHTPLAVGLLLGLTSMLSQLLFVLFAVFLALGQESGTH--QDSDHAMAAFMFILFFLFLLFSIVLAKFRMTVIET 160          
BLAST of mRNA_Ecto-sp9_F_contig117.1412.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CT56_9STRA)

HSP 1 Score: 103 bits (258), Expect = 1.750e-24
Identity = 62/172 (36.05%), Postives = 100/172 (58.14%), Query Frame = 0
Query:    7 MDNIRSAVEHAD----------KNPSKVVSYSWYLVLVFAAVDILVALINASTNDSSANGSHAASFASVWTLFMVLGVSVAGTVILKKYHTPLAVGTLLGLTTMMSQFMFVLFAVFLALAEYADEPG--LATGDRTMAVFSFFLFLLYGLFSFVLGRYRTTVMNTPGTASSN 166
            MD ++S+++  D          ++P+ ++ + W L +V A  D++ +L  AS NDS  +GS  A FA++W++FMV+G+SV     L K+ TP A+G L+G   MMSQ    LF VF+ LA  A++    L + +  MA FSF LF++YG+F  ++ ++R  V      A S+
Sbjct:    1 MDKLKSSIKCVDGCPPSMARYKEDPAVLLQHIWLLSVVIAFADVITSLSVASGNDSLRHGSKGAGFAAIWSMFMVIGISVYAYYALTKWCTPFAIGYLIGALLMMSQMFLTLFCVFVGLARAAEDTDDQLNSDNGAMAFFSFVLFVVYGVFGGLVFKHRGAVTKGVSDAPSS 172          
BLAST of mRNA_Ecto-sp9_F_contig117.1412.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1N1N4_HETAK)

HSP 1 Score: 97.8 bits (242), Expect = 1.990e-22
Identity = 59/155 (38.06%), Postives = 84/155 (54.19%), Query Frame = 0
Query:   16 HADKNPSKVVSYSWYLVLVFAAVDILVALINASTNDSSANGSHAA-SFASVWTLFMVLGVSVAGTVILKKYHTPLAVGTLLGLTTMMSQFMFVLFAVFLALAEYADEPGLATGDRTMAVFSFFLFLLYGLFSFVLGRYRTTVMNTPGTASSNDEG 169
            H  +NP K + Y+W   L   A+  + A + AS    S  GS+ A  FA V+T+ +++ +SV GT +L+KY TPLAVG  LG+  MMSQ   ++FAVF   A           D  +A F F LF++YG F+ VL  +R  +M      +SN  G
Sbjct:   11 HCARNPDKTIQYTWLASLALVAISFICACVAASK--ISTEGSNTAIGFAGVYTVLLMILLSVGGTFVLRKYKTPLAVGFFLGVVLMMSQQCLIIFAVFAGRAGVTTLSSEIGADNAVAFFCFVLFMVYGFFAGVLAFFRNDLMKATDAYNSNAGG 163          
BLAST of mRNA_Ecto-sp9_F_contig117.1412.1 vs.
Match: Uncharacterized (protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WDT8_GLOUD)

HSP 1 Score: 98.6 bits (244), Expect = 3.050e-22
Identity = 58/161 (36.02%), Postives = 90/161 (55.90%), Query Frame = 0
Query:   20 NPSKVVSYSWYLVLVFAAVDILVALINASTNDSSANG-SHAASFASVWTLFMVLGVSVAGTVILKKYHTPLAVGTLLGLTTMMSQFMFVLFAVFLALAEYA-------DEPGLATGDRTMAVFSFFLFLLYGLFSFVLGRYRTTVMNT-----PGTASSND 167
            NP  +++Y W++ L+F  +  L A++ A  N+ S    S +  F  +W + +V+G+SV GT++++KY TPLAVG L+G+  MMS  MF L  +F   A  A       DE      +   +VFSFF+F+LY  FS VL ++R  ++       P  A S+D
Sbjct:   18 NPKLLITYLWFITLIFGFMYALAAIVAAVNNNGSGEADSKSLGFVGIWAMLLVIGLSVGGTMVMRKYQTPLAVGFLIGVVLMMSLQMFSLSVLFAGAAYLARQERDKGDESTSIHSNEAGSVFSFFMFVLYLAFSIVLVKHRNVIIKEGVSLDPAAAGSSD 178          
BLAST of mRNA_Ecto-sp9_F_contig117.1412.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YEA3_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 3.460e-21
Identity = 57/156 (36.54%), Postives = 89/156 (57.05%), Query Frame = 0
Query:   20 NPSKVVSYSWYLVLVFAAVDILVALINASTNDSSANG-SHAASFASVWTLFMVLGVSVAGTVILKKYHTPLAVGTLLGLTTMMSQFMFVLFAVFLALAEYADEPGLATGDRTMAV--------FSFFLFLLYGLFSFVLGRYRTTVMNTPGTASSN 166
            NP  +++Y W++ LVF  +  L A++ A  N+ S    S +  F  VW +F+++G+SV GT++++KY TPLAVG  +G+  MMS  MF L  +F A A Y        G+ +++V        FSFF+F+LY  FS VL ++R  ++    T   N
Sbjct:   18 NPKLLITYLWFITLVFGFMYALAAIVAAVNNNGSGEADSKSLGFVGVWAMFLIIGLSVGGTMVMRKYQTPLAVGFFIGVVIMMSLQMFTLSVLF-AGAAYLARQERDKGNTSVSVHSNDAGSIFSFFMFVLYLAFSIVLIKHRNVIIKEGVTLDPN 172          
BLAST of mRNA_Ecto-sp9_F_contig117.1412.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JUR8_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 4.650e-21
Identity = 55/174 (31.61%), Postives = 93/174 (53.45%), Query Frame = 0
Query:    7 MDNIRSAVEHADKNPSKVVSYSWYLVLVFAAVDILVALINASTNDSSANG-SHAASFASVWTLFMVLGVSVAGTVILKKYHTPLAVGTLLGLTTMMSQFMFVLFAVFLALAEYADEPGLATGDRTM-------AVFSFFLFLLYGLFSFVLGRYRTTV----MNTPGTASSNDE 168
            +D +R       KNP  +++Y W+  +VF  +  + A++ A  N+    G S +  F  VW + +++ +SV GT+++++Y TPLAVG  +G+  MMS  MF L  +F+  A  A        + T        +VFSFF+F+LY + + VL ++R  +    MN    A +ND+
Sbjct:    7 IDEVREKTRKCCKNPKLLITYLWFATIVFGFMYAIAAIVAAVNNNGDGEGDSKSIGFVGVWAMLLIIALSVGGTLVMRRYQTPLAVGFFIGVVMMMSLQMFSLSIIFMGAAYLARIERAKGAEHTNVHSNEAGSVFSFFMFVLYAILTIVLVKHRNIIIKEGMNLGPNALTNDK 180          
BLAST of mRNA_Ecto-sp9_F_contig117.1412.1 vs.
Match: Uncharacterized (protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1APE9_PLAHL)

HSP 1 Score: 94.4 bits (233), Expect = 1.320e-20
Identity = 56/172 (32.56%), Postives = 89/172 (51.74%), Query Frame = 0
Query:    4 QDPMDNIRSAVEHADKNPSKVVSYSWYLVLVFAAVDILVALINASTNDSSANG-SHAASFASVWTLFMVLGVSVAGTVILKKYHTPLAVGTLLGLTTMMSQFMFVLFAVFLALAEYA-------DEPGLATGDRTMAVFSFFLFLLYGLFSFVLGRYRTTVMNTPGTASSND 167
            +D  D  R  +     NP  +++Y W+  ++F  +  + A++ A  N+      S +  F  +W + +++ +SV GT++++KY TPLAVG L+G+  MMS  MF L  +F   A  A       DE      D   +VFSFF+F+ Y  F+ VL R+R  V+   G    ND
Sbjct:   11 EDASDKARKCIN----NPKMLITYMWFTTILFGFMYAIAAIVAAINNNGEGESDSKSLGFVGIWAMILIVVLSVGGTMVMRKYQTPLAVGFLIGVVLMMSLQMFSLSIIFAGTAYLARIERAKGDEHTNVHSDEAGSVFSFFMFICYFAFAIVLVRHRNIVIKEEGKQDFND 178          
BLAST of mRNA_Ecto-sp9_F_contig117.1412.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CCX0_PYTOL)

HSP 1 Score: 94.4 bits (233), Expect = 2.400e-20
Identity = 55/160 (34.38%), Postives = 88/160 (55.00%), Query Frame = 0
Query:   20 NPSKVVSYSWYLVLVFAAVDILVALINASTNDSSA-NGSHAASFASVWTLFMVLGVSVAGTVILKKYHTPLAVGTLLGLTTMMSQFMFVLFAVFLALAEYA--------DEPGLATGDRTMAVFSFFLFLLYGLFSFVLGRYRTTVMNTPGTASSNDEGE 170
            NP  +++Y W+  L+F  +  L A++ A  N  S  + S +  F  +W +F+++G+SV GT++++KY TPLAVG  +G+  MM+  MF L  +F   A  A        +E    T +   AVFSFF+F+LY  F  VL + R  ++   GT  ++   E
Sbjct:   53 NPKILITYLWFTTLIFGFMYALAAIVAAVNNGGSGISSSKSLGFVGIWAMFLIVGLSVGGTLVMRKYQTPLAVGFFIGVVIMMAFQMFSLCVLFAGAAYLARQDRDANHNENVSVTSNDAGAVFSFFMFVLYIAFGVVLIKNRNVIIKESGTTDASVSSE 212          
BLAST of mRNA_Ecto-sp9_F_contig117.1412.1 vs.
Match: Uncharacterized (protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XBJ2_9STRA)

HSP 1 Score: 94.4 bits (233), Expect = 4.010e-20
Identity = 57/173 (32.95%), Postives = 92/173 (53.18%), Query Frame = 0
Query:    7 MDNIRSAVEHADKNPSKVVSYSWYLVLVFAAVDILVALINASTNDSSANG-SHAASFASVWTLFMVLGVSVAGTVILKKYHTPLAVGTLLGLTTMMSQFMFVLFAVFLALAEYA-------DEPGLATGDRTMAVFSFFLFLLYGLFSFVLGRYRTTVM----NTPGTASSND 167
            M++  S       NP  +++Y W+  ++F  +  + A++ A  ND      S +  F  VW + +++ +SV GT++++K+ TPLAVG L+G+  MMS  MF L  +F   A  A       DE      +   +VFSFF+F+LY +F+ VL R+R  V+    N    A +ND
Sbjct:   58 MEDASSKARKCINNPKMLITYLWFSTILFGFMYAIAAIVAAVNNDGEGESDSKSLGFVGVWAMILIVALSVGGTMVMRKHQTPLAVGFLIGVVLMMSLQMFSLSIIFAGAAYLARIERAKGDEHTNVHSNEAGSVFSFFMFILYAVFTIVLVRHRNIVIKEGVNLDPNAINND 230          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig117.1412.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized5.240e-12498.39protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FX95... [more]
Uncharacterized1.960e-3546.36protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical1.750e-2436.05protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Hypothetical1.990e-2238.06protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Uncharacterized3.050e-2236.02protein n=1 Tax=Globisporangium ultimum (strain AT... [more]
Uncharacterized3.460e-2136.54protein n=1 Tax=Pythium brassicum TaxID=1485010 Re... [more]
Uncharacterized4.650e-2131.61protein n=3 Tax=Phytophthora kernoviae TaxID=32545... [more]
Uncharacterized1.320e-2032.56protein n=1 Tax=Plasmopara halstedii TaxID=4781 Re... [more]
Uncharacterized2.400e-2034.38protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Uncharacterized4.010e-2032.95protein n=2 Tax=Phytophthora TaxID=4783 RepID=A0A6... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 48..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 83..93
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 27..47
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 131..150
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..82
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 151..186
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 120..130
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 94..119
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..26
NoneNo IPR availableTMHMMTMhelixcoord: 94..116
NoneNo IPR availableTMHMMTMhelixcoord: 26..45
NoneNo IPR availableTMHMMTMhelixcoord: 60..82
NoneNo IPR availableTMHMMTMhelixcoord: 131..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig117contigEcto-sp9_F_contig117:35830..37881 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig117.1412.1mRNA_Ecto-sp9_F_contig117.1412.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig117 35758..39199 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig117.1412.1 ID=prot_Ecto-sp9_F_contig117.1412.1|Name=mRNA_Ecto-sp9_F_contig117.1412.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=187bp
MQSQDPMDNIRSAVEHADKNPSKVVSYSWYLVLVFAAVDILVALINASTN
DSSANGSHAASFASVWTLFMVLGVSVAGTVILKKYHTPLAVGTLLGLTTM
MSQFMFVLFAVFLALAEYADEPGLATGDRTMAVFSFFLFLLYGLFSFVLG
RYRTTVMNTPGTASSNDEGEWQDEPGTDGMAPGTPV*
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