prot_Ecto-sp9_F_contig117.1409.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig117.1409.1
Unique Nameprot_Ecto-sp9_F_contig117.1409.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length109
Homology
[Close]
BLAST of mRNA_Ecto-sp9_F_contig117.1409.1 vs.
Match: Peptidase (S59 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K9B1_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 9.290e-9
Identity = 34/39 (87.18%), Postives = 36/39 (92.31%), Query Frame = 0 
Query:   15 AGFGTSTPFGSNTAQQQTPAFGAASTTFGASATGAFGAK 53
            AG  T+TPFGSNTAQQQTPAFGAASTTFG+S TGAFGAK
Sbjct:   12 AGAPTATPFGSNTAQQQTPAFGAASTTFGSSTTGAFGAK 50
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig117.1409.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Peptidase9.290e-987.18S59 domain-containing protein n=2 Tax=Ectocarpus T... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig117contigEcto-sp9_F_contig117:21839..24668 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig117.1409.1mRNA_Ecto-sp9_F_contig117.1409.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig117 21839..24886 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig117.1409.1 ID=prot_Ecto-sp9_F_contig117.1409.1|Name=mRNA_Ecto-sp9_F_contig117.1409.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=109bp
MFGAGGGGGFGTSSAGFGTSTPFGSNTAQQQTPAFGAASTTFGASATGAF
GAKPTFGSTTTSGFGAGTSAFGAAKPSVFGAPAAAPAATPAFGAAAPATS
AFGRTTSTT
back to top