prot_Ecto-sp9_F_contig11690.1402.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11690.1402.1
Unique Nameprot_Ecto-sp9_F_contig11690.1402.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length141
Homology
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BLAST of mRNA_Ecto-sp9_F_contig11690.1402.1 vs.
Match: PBPe (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JES6_9PHAE)

HSP 1 Score: 278 bits (710), Expect = 9.220e-90
Identity = 136/141 (96.45%), Postives = 137/141 (97.16%), Query Frame = 0 
Query:    1 MVQDTLTLTNVNDSGLQGIALDSCPFPRNGSWADGALMRDSLLSASGTLVGATGPLGMSVGEDDDGRDADTVTFCAVNLKPDATHGARFEVISTLDGATLESEDGEGFQAISPFQEAQTFPAGALTYPPDRPILQGRHMDV 141
            M QDTLTL NVNDSGLQGI LDSCPFPRNGSWADGALMRDSLLSASGTLVGATGPLGMSVGEDDDGRD DTVTFCAVNLKPDATHGARFEVISTLDGATL+SEDGEGFQAISPFQEAQTFPAGALTYPPDRPILQGRHMDV
Sbjct:    1 MAQDTLTLANVNDSGLQGIVLDSCPFPRNGSWADGALMRDSLLSASGTLVGATGPLGMSVGEDDDGRDVDTVTFCAVNLKPDATHGARFEVISTLDGATLDSEDGEGFQAISPFQEAQTFPAGALTYPPDRPILQGRHMDV 141
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BLAST of mRNA_Ecto-sp9_F_contig11690.1402.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1B0_ECTSI)

HSP 1 Score: 279 bits (714), Expect = 3.840e-89
Identity = 138/141 (97.87%), Postives = 138/141 (97.87%), Query Frame = 0 
Query:    1 MVQDTLTLTNVNDSGLQGIALDSCPFPRNGSWADGALMRDSLLSASGTLVGATGPLGMSVGEDDDGRDADTVTFCAVNLKPDATHGARFEVISTLDGATLESEDGEGFQAISPFQEAQTFPAGALTYPPDRPILQGRHMDV 141
            M QDTLTL NVN SGLQGIALDSCPFPRNGSWADGALMRDSLLSASGTLVGATGPLGMSVGEDDDGRDADTVTFCAVNLKPDATHGARFEVISTLDGATLESEDGEGFQAISPFQEAQTFPAGALTYPPDRPILQGRHMDV
Sbjct:  227 MAQDTLTLANVNGSGLQGIALDSCPFPRNGSWADGALMRDSLLSASGTLVGATGPLGMSVGEDDDGRDADTVTFCAVNLKPDATHGARFEVISTLDGATLESEDGEGFQAISPFQEAQTFPAGALTYPPDRPILQGRHMDV 367
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11690.1402.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
PBPe9.220e-9096.45domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized3.840e-8997.87protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11690contigEcto-sp9_F_contig11690:88..1552 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11690.1402.1mRNA_Ecto-sp9_F_contig11690.1402.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11690 88..1552 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11690.1402.1 ID=prot_Ecto-sp9_F_contig11690.1402.1|Name=mRNA_Ecto-sp9_F_contig11690.1402.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=141bp
MVQDTLTLTNVNDSGLQGIALDSCPFPRNGSWADGALMRDSLLSASGTLV
GATGPLGMSVGEDDDGRDADTVTFCAVNLKPDATHGARFEVISTLDGATL
ESEDGEGFQAISPFQEAQTFPAGALTYPPDRPILQGRHMDV
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