prot_Ecto-sp9_F_contig1167.1384.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1167.1384.1
Unique Nameprot_Ecto-sp9_F_contig1167.1384.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length95
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1167.1384.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JKE3_9PHAE)

HSP 1 Score: 175 bits (443), Expect = 1.080e-53
Identity = 89/94 (94.68%), Postives = 90/94 (95.74%), Query Frame = 0 
Query:    1 MSTPLEVTVKKSVRKTTVTTGEGKASFEVTEVSVSFPEMPEAYPKNWTTFCVEGKMESIEAFLGGKGKPLVALLSLRGALQVGYPHFVQMISTR 94
            MSTPLEVTVKKSVRKTTVTT EGKASFEVTEVSVSFPEMPE YPKNWTTFCVEGKM SIEAFLG KGKPLVALLSLRGALQVGYPHFVQMIST+
Sbjct:  119 MSTPLEVTVKKSVRKTTVTTREGKASFEVTEVSVSFPEMPETYPKNWTTFCVEGKMTSIEAFLGSKGKPLVALLSLRGALQVGYPHFVQMISTQ 212
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BLAST of mRNA_Ecto-sp9_F_contig1167.1384.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLJ5_ECTSI)

HSP 1 Score: 50.1 bits (118), Expect = 2.540e-5
Identity = 27/30 (90.00%), Postives = 27/30 (90.00%), Query Frame = 0 
Query:    1 MSTPLEVTVKKSVRKTTVTTGEGKASFEVT 30
            MSTPLEV VKKSVRKTTVT GE KASFEVT
Sbjct:  119 MSTPLEVAVKKSVRKTTVTAGERKASFEVT 148
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1167.1384.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.080e-5394.68protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.540e-590.00protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1167contigEcto-sp9_F_contig1167:22904..23895 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1167.1384.1mRNA_Ecto-sp9_F_contig1167.1384.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1167 21699..23922 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1167.1384.1 ID=prot_Ecto-sp9_F_contig1167.1384.1|Name=mRNA_Ecto-sp9_F_contig1167.1384.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=95bp
MSTPLEVTVKKSVRKTTVTTGEGKASFEVTEVSVSFPEMPEAYPKNWTTF
CVEGKMESIEAFLGGKGKPLVALLSLRGALQVGYPHFVQMISTR*
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