prot_Ecto-sp9_F_contig1153.1307.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1153.1307.1
Unique Nameprot_Ecto-sp9_F_contig1153.1307.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length613
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1153.1307.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L576_9PHAE)

HSP 1 Score: 896 bits (2316), Expect = 0.000e+0
Identity = 526/655 (80.31%), Postives = 549/655 (83.82%), Query Frame = 0 
Query:    1 MSSAWTTGDRRAKKQLEKSLSSDQNDHVTRFALVRLLASKADPAAAEELLRGPGVEDRLLADPNTRVAMLSSLGGTYLILWRARGETTSGSTGSRAGGGQGKDTREMVEIRLDVSSERTDLLHRAQHFLEEALMAPENLNDPAIRAQV-------------------------------------------AFCKEARGDCKEALALYASIISDSALSPGASAVIFRTSVLLAYVGRFDECVRYLEFVEGQPPKGCSMLLVQAILYTCYVSLGLEMKASRRLITLREAYNDEYTAGRIGGGFSREEIPWDRLAGWFYMWRELGVKSLRAGDYYAGIQMFSQATLQREDPETMVCTAEMLWVLGEPKRALALCEKAYAADPLHIGAQRRLSGWAPKKWKDRIVKEEERREAITEMRRLSDLSDRKADAMLARXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSDEFSRSDSSSSRSGSXXXXXXXXXXXXXXXXXXXXXXXXFASSLSAREQLERSVDEKSSASSAPXXXXXXXXSAAEAAEAGRSNFSACFRAETERAMRRKREANEHHREMPMDMASVKVAAETIHDAMRGGGWKTATNGARSGFATHEMRALARFQWHRKTHEAKITKVVYGS 612
            MS AWT GD RAKKQLEKSLSSDQ+DHVTRFALVRLLASKA+PAAAEELLRGPGVEDRLLADPNTRVAMLSSLGG YL+LWRARGETTS STGSRAGGGQGKDTRE+VEIRLDVSSERTDLLHRAQHFLEEALM+PENLNDPAIRAQV                                           AFCKEARGD KEAL LYASIISDSALSPGASAVIFRTSVLLAYVGR DECVRYLEF+EGQPPKGCSMLLVQA+LYTCYVSLGLE+K SRRLITLREAYNDEYTAGR+G GFSR+EIPWDRL GWFYMWRELGV+S+RAG+YYAGIQMFSQATLQR+DPETMVCTAEMLWVLGEPKRALALCE+AYAADPLHIGAQRRLSGWAP+KWK+RIVKEEERREAITEMRRL+DLSD+KADAMLAR                                    XXXXXXXXXXXXXGSD+FS SDSSSSRSGS  XXXXXXXXXXXXXXXXXXXXXXFASSLSA+EQ+ERSVDEKSSASSAP        SAAEAAEAGRSNFSACFRAETERAMRRKREA EHH EMPMDMASVKVAAE IH+AMRGGGWKT TNGARSGFATHEMRALARFQ HRKTHEAKITKVVYGS
Sbjct:    1 MSLAWTKGDWRAKKQLEKSLSSDQDDHVTRFALVRLLASKAEPAAAEELLRGPGVEDRLLADPNTRVAMLSSLGGAYLMLWRARGETTSESTGSRAGGGQGKDTREVVEIRLDVSSERTDLLHRAQHFLEEALMSPENLNDPAIRAQVGERGKWKSVLRLPGLARLPPSRLSLFRPDIRSLLHPDCCAFKKAFCKEARGDYKEALTLYASIISDSALSPGASAVIFRTSVLLAYVGRLDECVRYLEFIEGQPPKGCSMLLVQALLYTCYVSLGLEVKVSRRLITLREAYNDEYTAGRMGRGFSRDEIPWDRLPGWFYMWRELGVESIRAGNYYAGIQMFSQATLQRQDPETMVCTAEMLWVLGEPKRALALCERAYAADPLHIGAQRRLSGWAPQKWKERIVKEEERREAITEMRRLADLSDKKADAMLARRRRREKARFLRAWRRLHDKHKHRRSTSTEGEEAQTGXXXXXXXXXXXXXGSDKFSWSDSSSSRSGSSSXXXXXXXXXXXXXXXXXXXXXXFASSLSAKEQVERSVDEKSSASSAPVPEPFPVPSAAEAAEAGRSNFSACFRAETERAMRRKREATEHHGEMPMDMASVKVAAEAIHEAMRGGGWKTGTNGARSGFATHEMRALARFQCHRKTHEAKITKVVYGS 655
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1153.1307.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized0.000e+080.31protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 10..209
e-value: 5.6E-6
score: 28.2
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 273..419
e-value: 6.2E-6
score: 27.8
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 272..346

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1153contigEcto-sp9_F_contig1153:12181..16788 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1153.1307.1mRNA_Ecto-sp9_F_contig1153.1307.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1153 12181..16788 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1153.1307.1 ID=prot_Ecto-sp9_F_contig1153.1307.1|Name=mRNA_Ecto-sp9_F_contig1153.1307.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=613bp
MSSAWTTGDRRAKKQLEKSLSSDQNDHVTRFALVRLLASKADPAAAEELL
RGPGVEDRLLADPNTRVAMLSSLGGTYLILWRARGETTSGSTGSRAGGGQ
GKDTREMVEIRLDVSSERTDLLHRAQHFLEEALMAPENLNDPAIRAQVAF
CKEARGDCKEALALYASIISDSALSPGASAVIFRTSVLLAYVGRFDECVR
YLEFVEGQPPKGCSMLLVQAILYTCYVSLGLEMKASRRLITLREAYNDEY
TAGRIGGGFSREEIPWDRLAGWFYMWRELGVKSLRAGDYYAGIQMFSQAT
LQREDPETMVCTAEMLWVLGEPKRALALCEKAYAADPLHIGAQRRLSGWA
PKKWKDRIVKEEERREAITEMRRLSDLSDRKADAMLARRRRREKARLLLA
WRRLHEKRKHRRRTSTEDEEERGGRRRRDDTTTSRSSGSDEFSRSDSSSS
RSGSSSSSGSARSSRSGGGSSRSDRSSSFASSLSAREQLERSVDEKSSAS
SAPAPEPFPVPSAAEAAEAGRSNFSACFRAETERAMRRKREANEHHREMP
MDMASVKVAAETIHDAMRGGGWKTATNGARSGFATHEMRALARFQWHRKT
HEAKITKVVYGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf