prot_Ecto-sp9_F_contig11510.1288.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11510.1288.1
Unique Nameprot_Ecto-sp9_F_contig11510.1288.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length150
Homology
BLAST of mRNA_Ecto-sp9_F_contig11510.1288.1 vs.
Match: Trithorax (3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHY8_ECTSI)

HSP 1 Score: 284 bits (727), Expect = 4.560e-86
Identity = 144/150 (96.00%), Postives = 146/150 (97.33%), Query Frame = 0
Query:    1 GRVEAAVEVAVAVASSPALLYTRGEMGEEESALRESLSLYRTDCTDKALRRPIGSAKCEPIDLPTLHKRRAYTLPMPTPVTRQFAAPDGEFLAQSPESQLVPSGPNPNLGEEIKGEAPKAVVPEWKVLQAAHGARERSGEEAGRHLRAFR 150
            GRVEAAVEVAVAVASSPALLYTRGEMGEEESALRESLSLYRTDCTDKALRRP+GSAKCEPIDLPTLHKRRAYTLPMPTPVTRQFAAPDGEFLAQSPE Q VPSG NP+LGEEIKGEAPKAVVPEWKVLQAAH ARERSGEEAGRHLRAFR
Sbjct: 1933 GRVEAAVEVAVAVASSPALLYTRGEMGEEESALRESLSLYRTDCTDKALRRPVGSAKCEPIDLPTLHKRRAYTLPMPTPVTRQFAAPDGEFLAQSPEGQPVPSGTNPSLGEEIKGEAPKAVVPEWKVLQAAHAARERSGEEAGRHLRAFR 2082          
BLAST of mRNA_Ecto-sp9_F_contig11510.1288.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJY6_9PHAE)

HSP 1 Score: 282 bits (722), Expect = 2.140e-85
Identity = 143/150 (95.33%), Postives = 147/150 (98.00%), Query Frame = 0
Query:    1 GRVEAAVEVAVAVASSPALLYTRGEMGEEESALRESLSLYRTDCTDKALRRPIGSAKCEPIDLPTLHKRRAYTLPMPTPVTRQFAAPDGEFLAQSPESQLVPSGPNPNLGEEIKGEAPKAVVPEWKVLQAAHGARERSGEEAGRHLRAFR 150
            GRVEAAVEVAVAVASSPALLYTRGE+GEEESALRESLSLYRTDCTDKALRRP+GSAKCEPIDLPTLHKRRAYTLPMPT +TRQFAAPDGEFLAQSPE QLVPSGPNP+LGEEIK EAPKAVVPEWKVLQAAHGARERSGEEAGRHLRAFR
Sbjct: 1773 GRVEAAVEVAVAVASSPALLYTRGEIGEEESALRESLSLYRTDCTDKALRRPVGSAKCEPIDLPTLHKRRAYTLPMPTLMTRQFAAPDGEFLAQSPEDQLVPSGPNPSLGEEIKVEAPKAVVPEWKVLQAAHGARERSGEEAGRHLRAFR 1922          
BLAST of mRNA_Ecto-sp9_F_contig11510.1288.1 vs.
Match: GF22528 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI07_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 5.750e-60
Identity = 107/139 (76.98%), Postives = 117/139 (84.17%), Query Frame = 0
Query:   14 ASSPALLYTRGEMGEEESALRESLSLYRTDCTDKALRRPIGSAKCEPIDLPTLHKRRAYTLPMPTPVTRQFAAPDGEFLAQSPESQLVPSGPNPNLGEEIK--GEAPKAVVPEWKVLQAAHGARERSGEEAGRHLRAFR 150
            ASSPALLYTR  +GEEESALRESLSLYR DCTDKALRR + SAKCE IDL TLHKR+AYTLP+PTPVTRQFAAPDGE L+ +P  Q VP GPNP LG ++K   EA K VVPEWKVLQAAHGAR+R GEEA RH+RAFR
Sbjct: 1211 ASSPALLYTRRVIGEEESALRESLSLYRADCTDKALRRTVESAKCEAIDLTTLHKRKAYTLPLPTPVTRQFAAPDGELLSHTPVRQPVPRGPNPTLGGKVKVKPEAAKVVVPEWKVLQAAHGARQRFGEEAARHMRAFR 1349          
BLAST of mRNA_Ecto-sp9_F_contig11510.1288.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4S9_9PHAE)

HSP 1 Score: 176 bits (445), Expect = 4.040e-48
Identity = 118/276 (42.75%), Postives = 131/276 (47.46%), Query Frame = 0
Query:    1 GRVEA-AVEVAVAVASSPALLYTRGEMGEEESALRESLSLYRTDCTDKALR-----------------------------------------------------------------------------------------------------------------------------RPIGSAKCEPIDLPTLHKRRAYTLPMPTPVTRQFAAPDGEFLAQSPESQLVPSGPNPNLGEEIKGEAPKAVVPEWKVLQAAHGARERSGEEAGRHLRAFR 150
            GRV+A AVEVAVAVASSPALLYTR  +GEEESALRESLSLYR DCTDKALR                                                                                                                             R +GSAKCE I L TLHKR+A+TLP+PTPVTRQFAAPDGEFL+ +P  Q VP GPNP+L  ++K EA K VVPEWKVLQAAHGAR+R GEEA RH+RAFR
Sbjct: 1352 GRVKATAVEVAVAVASSPALLYTRRVIGEEESALRESLSLYRADCTDKALRLFVEIMRMVKKPGGWKQKLWKGDKLELPLFGIPRDMTRIEFKNCCDREGLHCLARGQVGREHEHVRVKLTKGDSQECLGVDIEKLSNYVRKFGWRVCIANMIETEKGSRASKSEEVREEAEGERWRTVGSAKCEAIHLTTLHKRKAHTLPLPTPVTRQFAAPDGEFLSHTPVRQSVPRGPNPSLRGKVKSEAAKVVVPEWKVLQAAHGARQRFGEEAARHMRAFR 1627          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11510.1288.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Trithorax4.560e-8696.003 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=... [more]
Uncharacterized2.140e-8595.33protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
GF225285.750e-6076.98n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
Uncharacterized4.040e-4842.75protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11510contigEcto-sp9_F_contig11510:159..1421 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11510.1288.1mRNA_Ecto-sp9_F_contig11510.1288.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11510 158..1421 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11510.1288.1 ID=prot_Ecto-sp9_F_contig11510.1288.1|Name=mRNA_Ecto-sp9_F_contig11510.1288.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=150bp
GRVEAAVEVAVAVASSPALLYTRGEMGEEESALRESLSLYRTDCTDKALR
RPIGSAKCEPIDLPTLHKRRAYTLPMPTPVTRQFAAPDGEFLAQSPESQL
VPSGPNPNLGEEIKGEAPKAVVPEWKVLQAAHGARERSGEEAGRHLRAFR
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