prot_Ecto-sp9_F_contig1151.1285.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1151.1285.1
Unique Nameprot_Ecto-sp9_F_contig1151.1285.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length205
Homology
BLAST of mRNA_Ecto-sp9_F_contig1151.1285.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7K6_ECTSI)

HSP 1 Score: 385 bits (990), Expect = 3.760e-135
Identity = 201/204 (98.53%), Postives = 203/204 (99.51%), Query Frame = 0
Query:    1 MVKHNNVVPNGHFHKKWQRRVRTWFDQPAKKKARRQARQEKAAKMAPRPTQLLRPAVHCPTIKYNSKVRLGRGFNVEELKEAGISKKTALTIGIAVDHRRTNKSEESFAANVARLKEYRANLIIFPRGSKHLPKKGDASLEEQKAATQVTGVTMPLVKADKPVEFLPVTAEMTATSVHSERRVARNELKLAGIRIRQKEEKTKK 204
            MVKHNNVVPNGHFHKKWQRRVRTWFDQPAKKKARRQARQEKAAKMAPRPTQLLRPAVHCPTIKYNSKVRLGRGFNVEELKEAGISKKTALTIGIAVDHRRTNKSEESFAANVARLKEYRANLIIFPRGSKHLPKKGD+SLEEQKAATQVTGVTMPLVKADKPVEFLPVTAEMTATS+HSERRVARNE KLAGIRIRQKEEKTKK
Sbjct:    1 MVKHNNVVPNGHFHKKWQRRVRTWFDQPAKKKARRQARQEKAAKMAPRPTQLLRPAVHCPTIKYNSKVRLGRGFNVEELKEAGISKKTALTIGIAVDHRRTNKSEESFAANVARLKEYRANLIIFPRGSKHLPKKGDSSLEEQKAATQVTGVTMPLVKADKPVEFLPVTAEMTATSLHSERRVARNEFKLAGIRIRQKEEKTKK 204          
BLAST of mRNA_Ecto-sp9_F_contig1151.1285.1 vs.
Match: 60S (ribosomal protein L13 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9T6_9STRA)

HSP 1 Score: 248 bits (634), Expect = 7.030e-81
Identity = 134/201 (66.67%), Postives = 151/201 (75.12%), Query Frame = 0
Query:    1 MVKHNNVVPNGHFHKKWQRRVRTWFDQPAKKKARRQARQEKAAKMAPRPTQLLRPAVHCPTIKYNSKVRLGRGFNVEELKEAGISKKTALTIGIAVDHRRTNKSEESFAANVARLKEYRANLIIFPRGSKHLPKKGDASLEEQKAATQVTGVTMPLVKADKPVEFLPVTAEMTATSVHSERRVARNELKLAGIRIRQKEEK 201
            MVKHNNV+PNGHFHKKWQ RV+TWFDQP KKKARR  R  KAA +APRPTQLLRPAVHCPTIKYN KVRLGRGF + ELKEAGIS+K A TIGI+VDHRRTN+S  +   NVARLKEY++ LIIFPR S   PK GDA+  +  AA QVTG  MPL KA   V F  VT EM A   +   RVAR++ +L GIR +Q  EK
Sbjct:    1 MVKHNNVIPNGHFHKKWQTRVKTWFDQPMKKKARRMRRAAKAAAVAPRPTQLLRPAVHCPTIKYNMKVRLGRGFTLAELKEAGISRKVARTIGISVDHRRTNRSLATMQNNVARLKEYQSKLIIFPRRSNAKPKAGDAAPGDTAAAAQVTGAVMPLTKAVPAVAFAAVTDEMKAFKAYEALRVARSDARLVGIRKKQAAEK 201          
BLAST of mRNA_Ecto-sp9_F_contig1151.1285.1 vs.
Match: 60S (ribosomal protein L13 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BG90_PYTIN)

HSP 1 Score: 233 bits (594), Expect = 7.870e-75
Identity = 124/193 (64.25%), Postives = 149/193 (77.20%), Query Frame = 0
Query:    1 MVKHNNVVPNGHFHKKWQRRVRTWFDQPAKKKARRQARQEKAAKMAPRPTQ-LLRPAVHCPTIKYNSKVRLGRGFNVEELKEAGISKKTALTIGIAVDHRRTNKSEESFAANVARLKEYRANLIIFPRGSKHLPKKGDASLEEQKAATQVTGVTMPLVKADKPVEFLPVTAEMTATSVHSERRVARNELKLAG 192
            MVKHNNV+PNGHFHK WQRR++TWFDQ AKKKARR  R+EKAA +APRP   LLRPAVHCPT+KY SKVR G+GF++EELKEAGISKK AL+IGIAVD+RRTNKS ES  ANV RLK Y+A L+IFPR S + PK GD++ EE   A QVTG   P+ +     E   +T EM  TSV+++ RVAR + ++AG
Sbjct:    1 MVKHNNVIPNGHFHKDWQRRIKTWFDQAAKKKARRLRRKEKAAAIAPRPAAGLLRPAVHCPTVKYASKVRAGKGFSLEELKEAGISKKQALSIGIAVDYRRTNKSVESLQANVQRLKAYKAKLVIFPRKSNNKPKHGDSTPEETANAVQVTGPIFPIARKTVKSESAVITEEMKNTSVYAQLRVARADARIAG 193          
BLAST of mRNA_Ecto-sp9_F_contig1151.1285.1 vs.
Match: Large (subunit ribosomal protein L13e n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z7Z7_NANGC)

HSP 1 Score: 231 bits (588), Expect = 6.420e-74
Identity = 121/194 (62.37%), Postives = 144/194 (74.23%), Query Frame = 0
Query:    1 MVKHNNVVPNGHFHKKWQRRVRTWFDQPAKKKARRQARQEKAAKMAPRPTQLLRPAVHCPTIKYNSKVRLGRGFNVEELKEAGISKKTALTIGIAVDHRRTNKSEESFAANVARLKEYRANLIIFPRGSKHLPKKGDASLEEQKAATQVTGVTMPLVKADKPVEFLPVTAEMTATSVHSERRVARNELKLAGIR 194
            MV+HNNV+PN HFHK WQ RV+TWF QPAKKKARR AR+ KAA +APRPTQLLRP VH PT +YN K RLGRGF ++ELKEAG++KK A ++GIAVDHRRTN S ES  ANV RLKEY++ LI+FP G    PK GD+S  E +AA Q TG  +PL    K VEF+ V+ E+     H+  RVARN+ KL GIR
Sbjct:    1 MVRHNNVIPNQHFHKDWQTRVKTWFVQPAKKKARRLARKAKAAALAPRPTQLLRPVVHAPTQRYNHKTRLGRGFTMQELKEAGLTKKYAKSVGIAVDHRRTNLSVESLQANVQRLKEYKSKLIVFPMGRVKKPKAGDSSTAECRAAVQATGTVLPLPTGKKAVEFVSVSEELKNFRAHTALRVARNDQKLDGIR 194          
BLAST of mRNA_Ecto-sp9_F_contig1151.1285.1 vs.
Match: 60S (ribosomal protein L13 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZEJ6_9STRA)

HSP 1 Score: 228 bits (581), Expect = 7.670e-73
Identity = 119/202 (58.91%), Postives = 150/202 (74.26%), Query Frame = 0
Query:    1 MVKHNNVVPNGHFHKKWQRRVRTWFDQPAKKKARRQARQEKAAKMAPRPTQ-LLRPAVHCPTIKYNSKVRLGRGFNVEELKEAGISKKTALTIGIAVDHRRTNKSEESFAANVARLKEYRANLIIFPRGSKHLPKKGDASLEEQKAATQVTGVTMPLVKADKPVEFLPVTAEMTATSVHSERRVARNELKLAGIRIRQKEEK 201
            MVKHNNV+PNGHFHK WQ R++TWFDQ +KKK+RR  R+ KAA +APRP   LLRPAVHCPT+KY SKVR GRGF ++ELKEAGIS+K ALTIGIAVD+RRTNKS ES  ANV RLK Y++ L++FPR     PK GD++LEE K A Q TG  +P+ +  K +    +T +M  TSV +  R+AR + +L G+R ++  EK
Sbjct:    1 MVKHNNVIPNGHFHKDWQNRIKTWFDQASKKKSRRLTRKAKAAAIAPRPAAGLLRPAVHCPTVKYGSKVRAGRGFTLDELKEAGISRKQALTIGIAVDYRRTNKSVESLQANVQRLKTYKSKLVVFPRKRASKPKHGDSTLEETKNAVQHTGAILPIARVSKDIATAKITDDMKKTSVVNTLRLARADARLVGLRKKKAAEK 202          
BLAST of mRNA_Ecto-sp9_F_contig1151.1285.1 vs.
Match: 60S (ribosomal protein L13 n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYA0_9STRA)

HSP 1 Score: 223 bits (569), Expect = 4.620e-71
Identity = 120/195 (61.54%), Postives = 147/195 (75.38%), Query Frame = 0
Query:    1 MVKHNNVVPNGHFHKKWQRRVRTWFDQPAKKKARRQARQEKAAKMAPRPTQ-LLRPAVHCPTIKYNSKVRLGRGFNVEELKEAGISKKTALTIGIAVDHRRTNKSEESFAANVARLKEYRANLIIFPRGSKHLPKKGDASLEEQKAATQVTGVTMPLVKADKPVEFLPVTAEMTATSVHSERRVARNELKLAGIR 194
            MVKHNNVVPN H HKKWQRRV+TWFDQPAKKK RR AR+ KAAK+APRP   LLRP VHC T KY+SK RLGRGF++ ELKEAGI KK A TIGIAVDHRRTNKS E+  AN+ARL E++A L++FPR S   PK GD++ EE   ATQ+TG  +P+VK D+ +E   VT EM      +  R+A+++ ++ G+R
Sbjct:    1 MVKHNNVVPNVHCHKKWQRRVKTWFDQPAKKKNRRLARKAKAAKLAPRPVSGLLRPVVHCSTQKYSSKTRLGRGFSLAELKEAGIPKKVARTIGIAVDHRRTNKSVEAMQANIARLAEFKARLVVFPRKSNQKPKNGDSAPEETSQATQLTGPILPIVKTDE-LETAAVTDEMKNFKAFTSLRLAKSDARVLGLR 194          
BLAST of mRNA_Ecto-sp9_F_contig1151.1285.1 vs.
Match: 60S (ribosomal protein L13 n=3 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9ZTH1_9STRA)

HSP 1 Score: 223 bits (569), Expect = 5.090e-71
Identity = 120/202 (59.41%), Postives = 145/202 (71.78%), Query Frame = 0
Query:    1 MVKHNNVVPNGHFHKKWQRRVRTWFDQPAKKKARRQARQEKAAKMAPRPTQ-LLRPAVHCPTIKYNSKVRLGRGFNVEELKEAGISKKTALTIGIAVDHRRTNKSEESFAANVARLKEYRANLIIFPRGSKHLPKKGDASLEEQKAATQVTGVTMPLVKADKPVEFLPVTAEMTATSVHSERRVARNELKLAGIRIRQKEEK 201
            MVKHNNV+PNGHFHK WQ R++TWFDQ AKKK+RR  R+ KAA +APRP   LLRPAVHCPT+KY SKVR GRGF ++ELKEAGIS+K ALTIGIAVD+RRTNKS ES  ANV RLK Y++ L++FPR     PK GDAS EE K+  Q  G   P+ +A   V    +T EM   SV    R+AR + +L G+R ++  EK
Sbjct:    1 MVKHNNVIPNGHFHKDWQNRIKTWFDQAAKKKSRRLTRKAKAAAIAPRPAAGLLRPAVHCPTVKYGSKVRAGRGFTLDELKEAGISRKQALTIGIAVDYRRTNKSVESLQANVQRLKAYKSKLVVFPRKRISKPKNGDASAEELKSVVQHKGALFPIARASTEVATAKITEEMKNDSVVKTLRLARADARLVGLRKKKAAEK 202          
BLAST of mRNA_Ecto-sp9_F_contig1151.1285.1 vs.
Match: 60S (ribosomal protein L13 n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WAC9_9STRA)

HSP 1 Score: 223 bits (568), Expect = 7.220e-71
Identity = 118/201 (58.71%), Postives = 147/201 (73.13%), Query Frame = 0
Query:    1 MVKHNNVVPNGHFHKKWQRRVRTWFDQPAKKKARRQARQEKAAKMAPRPTQ-LLRPAVHCPTIKYNSKVRLGRGFNVEELKEAGISKKTALTIGIAVDHRRTNKSEESFAANVARLKEYRANLIIFPRGSKHLPKKGDASLEEQKAATQVTGVTMPLVKADKPVEFLPVTAEMTATSVHSERRVARNELKLAGIRIRQKEE 200
            MVKHNNVVPN HFHK+WQ RV+TWFDQPAKKKARR AR+ KAA +APRP   LLRPAV CPT +YN+KVR GRGF +EELK AGISK+ A TIGIAVDHRR+NKS  +   NV RL  Y+A L++FPRGS   PK GDAS+EE  AATQ+TG   P+       EF+ +T ++ A + +   R+ R   ++ G+RI++ +E
Sbjct:    1 MVKHNNVVPNQHFHKQWQNRVKTWFDQPAKKKARRAARKAKAAAIAPRPAAGLLRPAVRCPTQRYNTKVRAGRGFTLEELKTAGISKRVARTIGIAVDHRRSNKSTATLQENVQRLNAYKAKLVVFPRGSNAKPKTGDASVEETSAATQLTGPLFPITAKPVSTEFVALTDDLKAKNAYRTLRIERCNRRMNGLRIKRAKE 201          
BLAST of mRNA_Ecto-sp9_F_contig1151.1285.1 vs.
Match: 60S (ribosomal protein L13 n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024TY88_9STRA)

HSP 1 Score: 222 bits (566), Expect = 1.410e-70
Identity = 115/201 (57.21%), Postives = 148/201 (73.63%), Query Frame = 0
Query:    2 VKHNNVVPNGHFHKKWQRRVRTWFDQPAKKKARRQARQEKAAKMAPRPTQ-LLRPAVHCPTIKYNSKVRLGRGFNVEELKEAGISKKTALTIGIAVDHRRTNKSEESFAANVARLKEYRANLIIFPRGSKHLPKKGDASLEEQKAATQVTGVTMPLVKADKPVEFLPVTAEMTATSVHSERRVARNELKLAGIRIRQKEEK 201
            +KHNNV+PNGHFHK WQ R++TWFDQ +KKK+RR  R+ KAA +APRP   LLRPAVHCPTIKY SKVR GRGF ++ELKEAGIS+K ALTIG++VD+RRTNKS ES  ANV RLK Y++ L++FPR     PK GD+ +EE K ATQ+ G  +P+ +  K V    +T E+   SV    R+AR + +L G+R ++ +EK
Sbjct:    1 MKHNNVIPNGHFHKDWQNRIKTWFDQASKKKSRRLTRKAKAAAIAPRPAAGLLRPAVHCPTIKYGSKVRAGRGFTLDELKEAGISRKQALTIGVSVDYRRTNKSVESLQANVQRLKTYKSKLVLFPRKRASKPKAGDSKVEETKNATQLIGAVLPIARPSKEVPTAKITEELKNNSVVKTLRLARADARLVGLRKKKADEK 201          
BLAST of mRNA_Ecto-sp9_F_contig1151.1285.1 vs.
Match: 60S (ribosomal protein L13 n=5 Tax=Peronosporaceae TaxID=4777 RepID=H3G8S1_PHYRM)

HSP 1 Score: 219 bits (559), Expect = 1.630e-69
Identity = 118/205 (57.56%), Postives = 150/205 (73.17%), Query Frame = 0
Query:    1 MVKHNNVVPNGHFHKKWQRRVRTWFDQPAKKKARRQARQEKAAKMAPRPTQ-LLRPAVHCPTIKYNSKVRLGRGFNVEELKEAGISKKTALTIGIAVDHRRTNKSEESFAANVARLKEYRANLIIFPRGSKHLPKKGDASLEEQKAATQVTGVTMPLVKADKPVEFLPVTAEMTATSVHSERRVARNELKLAGIRIRQKEEKTKK 204
            MVKHNNV+PNGHFHK W+ R++TWFDQ AKKK RR AR+ KAA +APRP   LLRPAVHCPTIKY SKVR G+GF +EELKEAGI++K A++IGIAVD RRTNKS ES  ANV RLK Y+A L++FPR S + PK GD+S EE K A Q TG  +P+ ++        +T EM   SV ++ RVAR + ++ G + ++  +K +K
Sbjct:    1 MVKHNNVIPNGHFHKYWESRIKTWFDQAAKKKTRRLARKAKAAAIAPRPAAGLLRPAVHCPTIKYGSKVRAGKGFTLEELKEAGINRKQAISIGIAVDFRRTNKSVESLQANVHRLKAYKAKLVVFPRKSVNKPKNGDSSPEETKNAVQYTGAILPITRSSVKSTTAVITPEMKEKSVFTQLRVARADKRIFGKQAKRLADKKEK 205          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1151.1285.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized3.760e-13598.53protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7K6... [more]
60S7.030e-8166.67ribosomal protein L13 n=2 Tax=Tribonema minus TaxI... [more]
60S7.870e-7564.25ribosomal protein L13 n=1 Tax=Pythium insidiosum T... [more]
Large6.420e-7462.37subunit ribosomal protein L13e n=3 Tax=Monodopsida... [more]
60S7.670e-7358.91ribosomal protein L13 n=1 Tax=Thraustotheca clavat... [more]
60S4.620e-7161.54ribosomal protein L13 n=1 Tax=Fibrocapsa japonica ... [more]
60S5.090e-7159.41ribosomal protein L13 n=3 Tax=Saprolegniaceae TaxI... [more]
60S7.220e-7158.71ribosomal protein L13 n=1 Tax=Pseudictyota dubia T... [more]
60S1.410e-7057.21ribosomal protein L13 n=4 Tax=Aphanomyces TaxID=10... [more]
60S1.630e-6957.56ribosomal protein L13 n=5 Tax=Peronosporaceae TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001380Ribosomal protein L13ePFAMPF01294Ribosomal_L13ecoord: 7..185
e-value: 5.8E-74
score: 247.8
IPR001380Ribosomal protein L13ePANTHERPTHR1172260S RIBOSOMAL PROTEIN L13coord: 1..203
IPR001380Ribosomal protein L13eHAMAPMF_00499Ribosomal_L13ecoord: 45..127
score: 20.816
NoneNo IPR availablePANTHERPTHR11722:SF060S RIBOSOMAL PROTEIN L13coord: 1..203

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1151contigEcto-sp9_F_contig1151:8046..13265 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1151.1285.1mRNA_Ecto-sp9_F_contig1151.1285.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1151 7904..13265 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1151.1285.1 ID=prot_Ecto-sp9_F_contig1151.1285.1|Name=mRNA_Ecto-sp9_F_contig1151.1285.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=205bp
MVKHNNVVPNGHFHKKWQRRVRTWFDQPAKKKARRQARQEKAAKMAPRPT
QLLRPAVHCPTIKYNSKVRLGRGFNVEELKEAGISKKTALTIGIAVDHRR
TNKSEESFAANVARLKEYRANLIIFPRGSKHLPKKGDASLEEQKAATQVT
GVTMPLVKADKPVEFLPVTAEMTATSVHSERRVARNELKLAGIRIRQKEE
KTKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001380Ribosomal_L13e