prot_Ecto-sp9_F_contig115.1274.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig115.1274.1
Unique Nameprot_Ecto-sp9_F_contig115.1274.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length188
Homology
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BLAST of mRNA_Ecto-sp9_F_contig115.1274.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYV4_ECTSI)

HSP 1 Score: 254 bits (648), Expect = 5.460e-75
Identity = 159/191 (83.25%), Postives = 160/191 (83.77%), Query Frame = 0 
Query:    1 MSKALLMSCPEGGRETNTNHGGSCLGGSLDEPPMPSTPPPPLPASIATXXXXPARTSLVGLNPKRPLPARPTRGSGSGS----ISAEQRPAAAKGNIWLAKAGLTRKNVAGSSXXXXXXXXXXXRESGSWRREGGTPTHLAGGRAGGGMAAARAKGASGAWAKLHRRLEEESKNFNGKRRAEVVPPVVTSG 187
            MSKALLMSCPEGGRETNTNHGGSCLGGSLDEPPMPSTPPPPLPASIATXXX PAR SLVG NPKRPLPARPTRGS        ISA QRPAAAKGNIWLAKAGLTRK+VAGSSXXXXXXXXXXX            PTHLA       MAAARAKGASGAWAKLHRRLEEESKNFNGKRRAEVVPPVVTSG
Sbjct: 1048 MSKALLMSCPEGGRETNTNHGGSCLGGSLDEPPMPSTPPPPLPASIATXXXLPARNSLVGANPKRPLPARPTRGSXXXXXXXXISAGQRPAAAKGNIWLAKAGLTRKHVAGSSXXXXXXXXXXXXXXXXXXXXXXXPTHLAXXXXXXXMAAARAKGASGAWAKLHRRLEEESKNFNGKRRAEVVPPVVTSG 1238
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BLAST of mRNA_Ecto-sp9_F_contig115.1274.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWX8_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 4.820e-24
Identity = 59/62 (95.16%), Postives = 59/62 (95.16%), Query Frame = 0 
Query:  127 RREGG-TPTHLAGGRAGGGMAAARAKGASGAWAKLHRRLEEESKNFNGKRRAEVVPPVVTSG 187
            RREGG TPTHLAGGRA GGMAAARAKGASGAWAKLHRRLEEESKNFNG RRAEVVPPVVTSG
Sbjct:  682 RREGGGTPTHLAGGRADGGMAAARAKGASGAWAKLHRRLEEESKNFNGTRRAEVVPPVVTSG 743
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig115.1274.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized5.460e-7583.25protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.820e-2495.16protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig115contigEcto-sp9_F_contig115:54528..55744 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig115.1274.1mRNA_Ecto-sp9_F_contig115.1274.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig115 53212..56704 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig115.1274.1 ID=prot_Ecto-sp9_F_contig115.1274.1|Name=mRNA_Ecto-sp9_F_contig115.1274.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=188bp
MSKALLMSCPEGGRETNTNHGGSCLGGSLDEPPMPSTPPPPLPASIATPP
PLPARTSLVGLNPKRPLPARPTRGSGSGSISAEQRPAAAKGNIWLAKAGL
TRKNVAGSSSPPPAPPETPPRESGSWRREGGTPTHLAGGRAGGGMAAARA
KGASGAWAKLHRRLEEESKNFNGKRRAEVVPPVVTSG*
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