prot_Ecto-sp9_F_contig11457.1246.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11457.1246.1
Unique Nameprot_Ecto-sp9_F_contig11457.1246.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length116
Homology
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BLAST of mRNA_Ecto-sp9_F_contig11457.1246.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJK0_9PHAE)

HSP 1 Score: 63.5 bits (153), Expect = 2.460e-9
Identity = 28/32 (87.50%), Postives = 30/32 (93.75%), Query Frame = 0 
Query:    5 QGNHDEAVPLNERATEIWMKALGPEHPTVATA 36
            QGN+ EAVPLNERATEIW+KALGPEHP VATA
Sbjct: 1064 QGNYAEAVPLNERATEIWIKALGPEHPQVATA 1095
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BLAST of mRNA_Ecto-sp9_F_contig11457.1246.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU94_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 1.160e-8
Identity = 29/39 (74.36%), Postives = 31/39 (79.49%), Query Frame = 0 
Query:    5 QGNHDEAVPLNERATEIWMKALGPEHPTVATALNNRARL 43
            QG + EA PL  RATEIW +ALGPEHP VATALNNRA L
Sbjct:  657 QGEYAEAEPLYARATEIWERALGPEHPLVATALNNRAGL 695
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11457.1246.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN14_9PHAE)

HSP 1 Score: 57.4 bits (137), Expect = 1.660e-7
Identity = 28/38 (73.68%), Postives = 28/38 (73.68%), Query Frame = 0 
Query:    6 GNHDEAVPLNERATEIWMKALGPEHPTVATALNNRARL 43
            G   EA PL  RATEIW  ALGPEHP VATALNNRA L
Sbjct:    2 GKFAEAEPLYRRATEIWETALGPEHPHVATALNNRAGL 39
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BLAST of mRNA_Ecto-sp9_F_contig11457.1246.1 vs.
Match: Tetratricopeptide (repeat-containing protein (Fragment) n=1 Tax=Cyanobacteria bacterium UBA8553 TaxID=2055771 RepID=A0A3B8JJF2_9CYAN)

HSP 1 Score: 53.5 bits (127), Expect = 2.180e-7
Identity = 24/39 (61.54%), Postives = 29/39 (74.36%), Query Frame = 0 
Query:    5 QGNHDEAVPLNERATEIWMKALGPEHPTVATALNNRARL 43
            QGN+ +A PL +R+  IW KALG EHP VAT+LNN A L
Sbjct:    9 QGNYSQAEPLYQRSLAIWEKALGSEHPNVATSLNNLADL 47
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11457.1246.1 vs.
Match: CHAT (domain-containing protein n=1 Tax=Synechococcus sp. (strain ATCC 27167 / PCC 6312) TaxID=195253 RepID=K9RRL7_SYNP3)

HSP 1 Score: 57.0 bits (136), Expect = 4.780e-7
Identity = 25/43 (58.14%), Postives = 31/43 (72.09%), Query Frame = 0 
Query:    1 KLSRQGNHDEAVPLNERATEIWMKALGPEHPTVATALNNRARL 43
            KL +QG ++EA+PL +R+  IW KALGP HP VAT LNN   L
Sbjct:   54 KLYQQGRYNEALPLYQRSLAIWEKALGPNHPNVATGLNNLGAL 96
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BLAST of mRNA_Ecto-sp9_F_contig11457.1246.1 vs.
Match: TPR (repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPW2_ECTSI)

HSP 1 Score: 54.7 bits (130), Expect = 5.300e-7
Identity = 25/42 (59.52%), Postives = 30/42 (71.43%), Query Frame = 0 
Query:    2 LSRQGNHDEAVPLNERATEIWMKALGPEHPTVATALNNRARL 43
            L  QG +DE  PL  RA EI  K LGP+HP +AT+LNNRAR+
Sbjct:   47 LESQGKYDEGDPLYLRAIEIGEKTLGPDHPALATSLNNRARM 88
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11457.1246.1 vs.
Match: Tetratricopeptide (repeat-containing protein (Fragment) n=1 Tax=Okeania sp. SIO2H7 TaxID=2607802 RepID=A0A6M0C7W0_9CYAN)

HSP 1 Score: 56.2 bits (134), Expect = 6.010e-7
Identity = 26/43 (60.47%), Postives = 33/43 (76.74%), Query Frame = 0 
Query:    1 KLSRQGNHDEAVPLNERATEIWMKALGPEHPTVATALNNRARL 43
            +L RQG + EA+PL E+A  I  KALGP+HP+VAT+LNN A L
Sbjct:    6 ELYRQGKYGEAIPLAEKALAIREKALGPDHPSVATSLNNLAEL 48
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11457.1246.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4D0_9PHAE)

HSP 1 Score: 53.9 bits (128), Expect = 5.870e-6
Identity = 26/39 (66.67%), Postives = 27/39 (69.23%), Query Frame = 0 
Query:    5 QGNHDEAVPLNERATEIWMKALGPEHPTVATALNNRARL 43
            QG + E  P   RAT IW KALGP HP VATALNNRA L
Sbjct:  602 QGEYAEGEPQYARATYIWEKALGPAHPQVATALNNRALL 640
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11457.1246.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2E7RJA7_9BACT)

HSP 1 Score: 52.4 bits (124), Expect = 8.990e-6
Identity = 25/38 (65.79%), Postives = 28/38 (73.68%), Query Frame = 0 
Query:    2 LSRQGNHDEAVPLNERATEIWMKALGPEHPTVATALNN 39
            L  +G++ EA PL  RA  IW KALGPEHP VATALNN
Sbjct:    5 LYDKGSYAEARPLFARALAIWEKALGPEHPRVATALNN 42
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11457.1246.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5H9_9PHAE)

HSP 1 Score: 52.4 bits (124), Expect = 1.460e-5
Identity = 25/39 (64.10%), Postives = 28/39 (71.79%), Query Frame = 0 
Query:    5 QGNHDEAVPLNERATEIWMKALGPEHPTVATALNNRARL 43
            QGN+ EA PL ER+  I  K LGP+HP VAT LNNRA L
Sbjct:  205 QGNYAEAKPLYERSQAIRKKVLGPDHPDVATVLNNRAGL 243
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11457.1246.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
Uncharacterized2.460e-987.50protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
NB-ARC1.160e-874.36domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized1.660e-773.68protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Tetratricopeptide2.180e-761.54repeat-containing protein (Fragment) n=1 Tax=Cyano... [more]
CHAT4.780e-758.14domain-containing protein n=1 Tax=Synechococcus sp... [more]
TPR5.300e-759.52repeat-containing protein n=1 Tax=Ectocarpus silic... [more]
Tetratricopeptide6.010e-760.47repeat-containing protein (Fragment) n=1 Tax=Okean... [more]
Uncharacterized5.870e-666.67protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized8.990e-665.79protein (Fragment) n=1 Tax=Planctomycetes bacteriu... [more]
Uncharacterized1.460e-564.10protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]

Pages

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019734Tetratricopeptide repeatSMARTSM00028tpr_5coord: 34..65
e-value: 41.0
score: 9.5
coord: 74..107
e-value: 3.5E-4
score: 29.9
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 32..65
score: 5.517
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 74..107
score: 9.027
NoneNo IPR availablePFAMPF13374TPR_10coord: 2..31
e-value: 1.4E-5
score: 24.8
NoneNo IPR availablePFAMPF13424TPR_12coord: 45..106
e-value: 7.5E-20
score: 71.0
NoneNo IPR availablePANTHERPTHR45783FAMILY NOT NAMEDcoord: 5..116
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..116
e-value: 6.6E-45
score: 155.4
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 2..106
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..107
score: 10.776

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11457contigEcto-sp9_F_contig11457:2345..3299 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11457.1246.1mRNA_Ecto-sp9_F_contig11457.1246.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11457 2345..3299 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11457.1246.1 ID=prot_Ecto-sp9_F_contig11457.1246.1|Name=mRNA_Ecto-sp9_F_contig11457.1246.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=116bp
KLSRQGNHDEAVPLNERATEIWMKALGPEHPTVATALNNRARLGAGKYDE
AEPLYERSLAIREKALGPEHPDVAESLNNRAGLLYAQGKYDEADPLYQRA
LAIDEKVLGPDHPDVA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019734TPR_repeat
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom