prot_Ecto-sp9_F_contig11446.1237.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11446.1237.1
Unique Nameprot_Ecto-sp9_F_contig11446.1237.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length254
Homology
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BLAST of mRNA_Ecto-sp9_F_contig11446.1237.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGM7_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 5.450e-61
Identity = 90/122 (73.77%), Postives = 101/122 (82.79%), Query Frame = 0 
Query:    1 MVRGFRASCGKVLHGKDATAAGELRRCFACDRPGSRDGCSTSWRHVGDSETWARLGEWSASVGSAWRHDRDLQQNPLQVGKCICSRTDCVVVLYMTYMWRRQREEEGALHKMVVGQRSPMGR 122
            MVR  RASCGKV+HGK+  AAGELRRCFACDRPGSRDGCST+W+HV DSE WA LGEWSA+VG  W H+RDL  +PL+ G+CIC R DCVV LY  Y  RRQREE+GALH MV+GQRSPMGR
Sbjct:    1 MVRQRRASCGKVVHGKEPAAAGELRRCFACDRPGSRDGCSTNWQHVVDSEYWAELGEWSATVGEGWTHERDLVGDPLKAGECICRRADCVVNLYQRYKGRRQREEKGALHTMVIGQRSPMGR 122
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11446.1237.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE39_9PHAE)

HSP 1 Score: 129 bits (324), Expect = 1.300e-34
Identity = 55/89 (61.80%), Postives = 67/89 (75.28%), Query Frame = 0 
Query:    1 MVRGFRASCGKVLHGKDATAAGELRRCFACDRPGSRDGCSTSWRHVGDSETWARLGEWSASVGSAWRHDRDLQQNPLQVGKCICSRTDC 89
            M RGF  SCG+ +HGK+A   G L  CFAC RPGSRDGCS+ W+HVG +  WA +GEWSA VG  W H+RDLQ +PL+VG+CIC+R DC
Sbjct:    1 MTRGFLGSCGRAVHGKEAPGGG-LGLCFACGRPGSRDGCSSRWKHVGQTTYWAEVGEWSAMVGQEWPHERDLQGDPLKVGECICTRPDC 88
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11446.1237.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTC1_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 1.440e-17
Identity = 39/71 (54.93%), Postives = 47/71 (66.20%), Query Frame = 0 
Query:   11 KVLHGKDATAAGELRRCFACDRPGSRDGCSTSWRHVGDSETWARLGEWSASVGSAWRHDRDLQQNPLQVGK 81
            + +HGK+A   G    CFAC RPGSRDGCS+ W+HVG    WA LGEWSA VG  W H+RD  + P Q G+
Sbjct:    7 RAVHGKEAPGGGP-GLCFACGRPGSRDGCSSRWKHVGQGTYWAELGEWSAIVGEEWPHERDTCR-PSQSGR 75
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11446.1237.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized5.450e-6173.77protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.300e-3461.80protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.440e-1754.93protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11446contigEcto-sp9_F_contig11446:698..2419 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11446.1237.1mRNA_Ecto-sp9_F_contig11446.1237.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11446 667..2644 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11446.1237.1 ID=prot_Ecto-sp9_F_contig11446.1237.1|Name=mRNA_Ecto-sp9_F_contig11446.1237.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=254bp
MVRGFRASCGKVLHGKDATAAGELRRCFACDRPGSRDGCSTSWRHVGDSE
TWARLGEWSASVGSAWRHDRDLQQNPLQVGKCICSRTDCVVVLYMTYMWR
RQREEEGALHKMVVGQRSPMGRYLSTGSQVRALLQHVELEGRVLDCCGAA
QDAVYTVLSSHGLRVATNDMNPTLVADTHHLDAAADAFLEAYVKETVRLD
WVVTSPPYKHAFAIFETGDAGRAYGSDLQAEVNFSGAHQNQRAVAKGKCA
PTG*
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