prot_Ecto-sp9_F_contig11442.1235.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11442.1235.1
Unique Nameprot_Ecto-sp9_F_contig11442.1235.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length41
Homology
BLAST of mRNA_Ecto-sp9_F_contig11442.1235.1 vs.
Match: Uncharacterized (protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G8Q1_ECTSI)

HSP 1 Score: 68.6 bits (166), Expect = 5.890e-13
Identity = 35/37 (94.59%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    1 MTGLSAMSEGDEEEGGGDHDAREAANRIPAADEIRAV 37
            MT LSAMSEGDEEEGGGDHDAREAA+RIPAADEIRAV
Sbjct:    1 MTSLSAMSEGDEEEGGGDHDAREAADRIPAADEIRAV 37          
BLAST of mRNA_Ecto-sp9_F_contig11442.1235.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPP1_ECTSI)

HSP 1 Score: 67.4 bits (163), Expect = 6.170e-13
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    1 MTGLSAMSEGDEEEGGGDHDAREAANRIPAADEIRAV 37
            MTGLSAMSEGDEEEGGGDH AREAA+R+PAADEIRAV
Sbjct:    8 MTGLSAMSEGDEEEGGGDHHAREAADRLPAADEIRAV 44          
BLAST of mRNA_Ecto-sp9_F_contig11442.1235.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G515_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 1.270e-10
Identity = 32/37 (86.49%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    1 MTGLSAMSEGDEEEGGGDHDAREAANRIPAADEIRAV 37
            MT  SAMSEGDEEEGGGDHDAREAA+  PAADEIRAV
Sbjct:    1 MTSSSAMSEGDEEEGGGDHDAREAADGSPAADEIRAV 37          
BLAST of mRNA_Ecto-sp9_F_contig11442.1235.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM56_ECTSI)

HSP 1 Score: 58.2 bits (139), Expect = 3.890e-9
Identity = 31/37 (83.78%), Postives = 32/37 (86.49%), Query Frame = 0
Query:    1 MTGLSAMSEGDEEEGGGDHDAREAANRIPAADEIRAV 37
            MT LSAMSEG EEEGGGDH AREAA+  PAADEIRAV
Sbjct:   76 MTSLSAMSEGGEEEGGGDHHAREAADGSPAADEIRAV 112          
BLAST of mRNA_Ecto-sp9_F_contig11442.1235.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q8_ECTSI)

HSP 1 Score: 55.8 bits (133), Expect = 1.580e-8
Identity = 28/37 (75.68%), Postives = 32/37 (86.49%), Query Frame = 0
Query:    1 MTGLSAMSEGDEEEGGGDHDAREAANRIPAADEIRAV 37
            +T LSA+SEG+EE+GGGDHD REAA   PAADEIRAV
Sbjct:    8 ITSLSALSEGNEEDGGGDHDTREAAGGSPAADEIRAV 44          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11442.1235.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
Uncharacterized5.890e-1394.59protein n=3 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized6.170e-1391.89protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.270e-1086.49protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.890e-983.78protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.580e-875.68protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11442contigEcto-sp9_F_contig11442:3519..3641 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11442.1235.1mRNA_Ecto-sp9_F_contig11442.1235.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11442 3249..3656 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11442.1235.1 ID=prot_Ecto-sp9_F_contig11442.1235.1|Name=mRNA_Ecto-sp9_F_contig11442.1235.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=41bp
MTGLSAMSEGDEEEGGGDHDAREAANRIPAADEIRAVHPG*
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