prot_Ecto-sp9_F_contig11358.1163.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11358.1163.1
Unique Nameprot_Ecto-sp9_F_contig11358.1163.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length114
Homology
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BLAST of mRNA_Ecto-sp9_F_contig11358.1163.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ8_ECTSI)

HSP 1 Score: 196 bits (499), Expect = 5.050e-56
Identity = 100/108 (92.59%), Postives = 103/108 (95.37%), Query Frame = 0 
Query:    1 MLLQVLKLGGDRGAIQGMCTFLEGRVKKWRGRRLVVTLTAEIIDKARKRFFSSGSAGEFHFCSFFVASLSEEIGEDLWLDGFQLTARVDPDDRDSAQAKLETMVTRFR 108
            MLLQVLKLGGDRGAIQGMCTFLEGRVK+WRG+RLVVTLTAEIIDKARKRFFSSGSAG FHF SFFVASLSEEIGE LWLDGFQLTARVDPDDRDSAQAKLETMV + R
Sbjct: 1370 MLLQVLKLGGDRGAIQGMCTFLEGRVKEWRGQRLVVTLTAEIIDKARKRFFSSGSAGGFHFSSFFVASLSEEIGEHLWLDGFQLTARVDPDDRDSAQAKLETMVAQPR 1477
[Close]
BLAST of mRNA_Ecto-sp9_F_contig11358.1163.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR78_9PHAE)

HSP 1 Score: 191 bits (484), Expect = 5.320e-54
Identity = 100/116 (86.21%), Postives = 101/116 (87.07%), Query Frame = 0 
Query:    1 MLLQVLKLGGDRGAIQGM-------------CTFLEGRVKKWRGRRLVVTLTAEIIDKARKRFFSSGSAGEFHFCSFFVASLSEEIGEDLWLDGFQLTARVDPDDRDSAQAKLETM 103
            MLLQVLKLGGDRGAIQGM             CTFLEGRVK+WRGRRLVVTLTAEIIDKARK FFSSGSAGEFHFCSFFVASLSEEIGEDLWLDGFQLTAR DPDDRDSAQAKLETM
Sbjct: 1496 MLLQVLKLGGDRGAIQGMSAYLNLKGLNEIRCTFLEGRVKEWRGRRLVVTLTAEIIDKARKCFFSSGSAGEFHFCSFFVASLSEEIGEDLWLDGFQLTARADPDDRDSAQAKLETM 1611
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11358.1163.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized5.050e-5692.59protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.320e-5486.21protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11358contigEcto-sp9_F_contig11358:1711..3157 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11358.1163.1mRNA_Ecto-sp9_F_contig11358.1163.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11358 1711..3157 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11358.1163.1 ID=prot_Ecto-sp9_F_contig11358.1163.1|Name=mRNA_Ecto-sp9_F_contig11358.1163.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=114bp
MLLQVLKLGGDRGAIQGMCTFLEGRVKKWRGRRLVVTLTAEIIDKARKRF
FSSGSAGEFHFCSFFVASLSEEIGEDLWLDGFQLTARVDPDDRDSAQAKL
ETMVTRFREAIGVG
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