prot_Ecto-sp9_F_contig11345.1153.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11345.1153.1
Unique Nameprot_Ecto-sp9_F_contig11345.1153.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length88
Homology
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BLAST of mRNA_Ecto-sp9_F_contig11345.1153.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWD6_ECTSI)

HSP 1 Score: 171 bits (433), Expect = 4.000e-48
Identity = 83/88 (94.32%), Postives = 85/88 (96.59%), Query Frame = 0 
Query:    1 MDNAVTLVGLAGWDVLWQMRGLALSRRPAVRLSSPAERTERDRQALKLTMGPRRGIVACNGRAGHVQFYNVGTNCLEASAEVVRFNRD 88
            MDNAVTLVGLAGWDVLWQMRGLALSR P +RL+SPAER ERDRQALKLTMGPRRGIVACNGRAGHVQFYNVGTNCLEASAEVVRFNRD
Sbjct:    1 MDNAVTLVGLAGWDVLWQMRGLALSRPPPMRLTSPAERAERDRQALKLTMGPRRGIVACNGRAGHVQFYNVGTNCLEASAEVVRFNRD 88
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BLAST of mRNA_Ecto-sp9_F_contig11345.1153.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD90_9PHAE)

HSP 1 Score: 169 bits (429), Expect = 4.610e-47
Identity = 82/88 (93.18%), Postives = 84/88 (95.45%), Query Frame = 0 
Query:    1 MDNAVTLVGLAGWDVLWQMRGLALSRRPAVRLSSPAERTERDRQALKLTMGPRRGIVACNGRAGHVQFYNVGTNCLEASAEVVRFNRD 88
            MDNAVTLVGLAGWDVLWQMRGLALSR PA+RLSSPAER ERDRQALKLTMGP+RGIV CNGRAGHVQFYNVGTNCLEASAEVVR NRD
Sbjct:  498 MDNAVTLVGLAGWDVLWQMRGLALSRPPAIRLSSPAERAERDRQALKLTMGPKRGIVVCNGRAGHVQFYNVGTNCLEASAEVVRVNRD 585
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11345.1153.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized4.000e-4894.32protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.610e-4793.18protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11345contigEcto-sp9_F_contig11345:799..2032 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11345.1153.1mRNA_Ecto-sp9_F_contig11345.1153.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11345 799..2032 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11345.1153.1 ID=prot_Ecto-sp9_F_contig11345.1153.1|Name=mRNA_Ecto-sp9_F_contig11345.1153.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=88bp
MDNAVTLVGLAGWDVLWQMRGLALSRRPAVRLSSPAERTERDRQALKLTM
GPRRGIVACNGRAGHVQFYNVGTNCLEASAEVVRFNRD
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