prot_Ecto-sp9_F_contig1133.1144.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1133.1144.1
Unique Nameprot_Ecto-sp9_F_contig1133.1144.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length307
Homology
BLAST of mRNA_Ecto-sp9_F_contig1133.1144.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRS9_9PHAE)

HSP 1 Score: 496 bits (1278), Expect = 1.440e-175
Identity = 263/307 (85.67%), Postives = 266/307 (86.64%), Query Frame = 0
Query:    1 MRCVCRRPFRAINARWLLSVLIVVACQATSTLRSRGATPAAXXXXXXXXXXXXXXXXXXXXXXXX---LLSARCRTAFRSQPHRRGVPTRRGTHHRSRRYFPHRYTELLRMGARSGDGSYRGGPAGPRPKKRPLVFLCQAMNDAILEMCVENKGRPLAKSMTDFVEFSMEGLASGYSKEQLLLELQLLDSTTRVPGQTLTGVEKRYRTQWISALDFVMQNLKFIDEQEPKSVEEFHIKSQASVDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAISPQMVPLSQLVLLGIRALQKLEDAAE 304
            MR VCRRPFRAI ARWLLSVLIVVACQATSTLR+R ATPAA                           L S+RC T FRSQPHRRGV TR GTHHR RRYFPHRYTELLRMGA SGD  Y+G PAGPRPKKRPLVFLCQAMNDAILEMCVENKGRPLAKSMTDFVE SMEGLASGYSKEQLLLELQLLDSTTRVPGQTLTGVEKRYRTQWISALDFVMQNLKFIDEQEPKSVEEFHIKSQASVDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAISPQMVPLSQLVLLGIRALQKLEDAAE
Sbjct:    5 MRRVCRRPFRAITARWLLSVLIVVACQATSTLRNRCATPAATSTCSMQGACSSSAGATSTCRASRSAFLPSSRCGTKFRSQPHRRGVSTRPGTHHRIRRYFPHRYTELLRMGAGSGDERYQGAPAGPRPKKRPLVFLCQAMNDAILEMCVENKGRPLAKSMTDFVELSMEGLASGYSKEQLLLELQLLDSTTRVPGQTLTGVEKRYRTQWISALDFVMQNLKFIDEQEPKSVEEFHIKSQASVDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAISPQMVPLSQLVLLGIRALQKLEDAAE 311          
BLAST of mRNA_Ecto-sp9_F_contig1133.1144.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN10_ECTSI)

HSP 1 Score: 381 bits (978), Expect = 1.050e-131
Identity = 195/197 (98.98%), Postives = 195/197 (98.98%), Query Frame = 0
Query:  108 MGARSGDGSYRGGPAGPRPKKRPLVFLCQAMNDAILEMCVENKGRPLAKSMTDFVEFSMEGLASGYSKEQLLLELQLLDSTTRVPGQTLTGVEKRYRTQWISALDFVMQNLKFIDEQEPKSVEEFHIKSQASVDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAISPQMVPLSQLVLLGIRALQKLEDAAE 304
            MGARSGDGSYRGGPAGPRPKKRPLVFLCQAMNDAILEMCVENKGRPLAKSMTDFVEFSMEGLASGYSKEQLLLELQLLDSTTRVPGQTLTGVEKRYRTQWISALDFVMQNLKFIDEQEPKSVEEFHIKSQ  VDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAISPQMVPLSQLVLLGIRALQKLEDAAE
Sbjct:    1 MGARSGDGSYRGGPAGPRPKKRPLVFLCQAMNDAILEMCVENKGRPLAKSMTDFVEFSMEGLASGYSKEQLLLELQLLDSTTRVPGQTLTGVEKRYRTQWISALDFVMQNLKFIDEQEPKSVEEFHIKSQ--VDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAISPQMVPLSQLVLLGIRALQKLEDAAE 195          
BLAST of mRNA_Ecto-sp9_F_contig1133.1144.1 vs.
Match: Uncharacterized (protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HTH8_KLENI)

HSP 1 Score: 116 bits (291), Expect = 1.890e-27
Identity = 67/178 (37.64%), Postives = 106/178 (59.55%), Query Frame = 0
Query:  129 RPLVFLCQAMNDAILEMCVENKGRPLAKSMTDFVEFSMEGLASGYSKEQLLLELQLLDSTTR-----VPGQTLTGVEKRYRTQWISALDFVMQNLKFIDE---QEPKSVEEFHIKSQASVDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAISPQMVPLSQLVLLGIRALQK 298
            R L  +CQ +  A  E+CVEN GRP A ++ DFV  ++E    G S++++ ++LQ            V G  LTG E+RYR+QW+  +   +Q LK   E   Q+P + +E  I   A +  V+ G++T +EQ+ VKFD+AL+T G +GG  +E   ++PQ +P++QLVLL ++ L +
Sbjct:   71 RSLDDVCQDIEKAFSEVCVENLGRPAAAALFDFVAATVEAYMLGASRDKVTIQLQYGSKEAYRIERDVAGYRLTGSEERYRSQWLDVIYTTLQLLKQGSEEWRQQPATQDESLI---AIIHRVLEGQRTGEEQSLVKFDRALSTAGASGGATSERRVVAPQWIPVTQLVLLTMKVLNE 245          
BLAST of mRNA_Ecto-sp9_F_contig1133.1144.1 vs.
Match: Uncharacterized (protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6W5D4_MARPO)

HSP 1 Score: 114 bits (286), Expect = 1.480e-26
Identity = 63/181 (34.81%), Postives = 105/181 (58.01%), Query Frame = 0
Query:  128 KRPLVFLCQAMNDAILEMCVENKGRPLAKSMTDFVEFSMEGLASGYSKEQLLLELQLLD-----STTRVPGQTLTGVEKRYRTQWISALDFVMQNLKFIDEQEPKSV-----EEFHIKSQASVDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAISPQMVPLSQLVLLGIRALQK 298
            K  L  +C+ +     E+CVEN+GRP   ++ +FV  ++    +G+++++L L+L   D     S     G  LT  E++YR+QW+  +   +Q LK +D Q  +S       + H+ S   V  V+ G+Q+ DEQ+FVKFD+ LAT G +GG   +  A++PQ +PL+QLVLL ++ + +
Sbjct:   82 KPSLADICRCLQHCFFEICVENRGRPAGTALHEFVGAAVAAYLAGHTRDRLSLQLAYGDNGMEESKLETEGFRLTASEEQYRSQWLDTIYTTLQFLKVVDNQASRSSLVTAQTDSHLFS--IVRRVVEGQQSGDEQSFVKFDRGLATKGASGGAIAQREAVAPQFIPLTQLVLLTMKVVNE 260          
BLAST of mRNA_Ecto-sp9_F_contig1133.1144.1 vs.
Match: Uncharacterized (protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LBA0_CHABU)

HSP 1 Score: 115 bits (288), Expect = 2.200e-26
Identity = 64/182 (35.16%), Postives = 105/182 (57.69%), Query Frame = 0
Query:  129 RPLVFLCQAMNDAILEMCVENKGRPLAKSMTDFVEFSMEGLASGYSKEQLLLELQL----LDST-TRVPGQTLTGVEKRYRTQWISALDFVMQNLKFIDEQEPKSVEEFHIKSQAS-VDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAISPQMVPLSQLVLLGIRALQKLEDAAE 304
            R L  LC+ +  A  E+CV+N GRP   ++ DF   + E    G++++QL LEL+     +D    +  G  LT  E+RYR+QWI  +   +  +K ++ +E  +  +   +   + V  V+ G++T +EQT VKFD+ALAT G +GG A +   I+PQ VP+SQ+VLL ++ + + +   E
Sbjct:  134 RSLPQLCRLVERAFFEVCVQNLGRPAGMALYDFTVATSEAFFKGFTRDQLALELRFGSHHMDGYGVQAAGYRLTSSEERYRSQWIDTIYVTLHMMKVVEPEEASNTPDMGDEWLRNIVHRVLEGQRTGEEQTAVKFDRALATAGASGGAAAQKKVIAPQWVPVSQIVLLTMKVVAEAQARHE 315          
BLAST of mRNA_Ecto-sp9_F_contig1133.1144.1 vs.
Match: Uncharacterized (protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4F2M6_VITBC)

HSP 1 Score: 99.4 bits (246), Expect = 3.570e-21
Identity = 63/171 (36.84%), Postives = 97/171 (56.73%), Query Frame = 0
Query:  136 QAMNDAILEMCVENKGRPLAKSMTDFVEFSMEG-LASGYSKEQLLLELQLLDST--TRVPGQTLTGVEKRYRTQWISALDFVMQNLKFID-----EQEPKSVEEFHIKSQASVDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAISPQMVPLSQLVLLGIRALQK 298
            +++N    E C+ N+GR LA+++ DFVE  ++  +  G S  QL LE Q+       R P + LT  +K  R +WI  +   ++ L  +      E E  S        Q  V   ++G+QT D Q++V FD++LAT G  GGVATE +A+ PQ++PLSQLVLL ++A+ +
Sbjct:   47 RSLNLYYREACLHNRGRSLAEALGDFVEECVDVFIYGGCSPVQLQLETQVEGEIHCERNPLERLTQDDKEARARWIRCVWLTLRTLGVVSVRRDSEVEGPSTSAADAALQGLVSTTVKGQQTGDRQSYVPFDRSLATRGNQGGVATENVAVPPQVIPLSQLVLLTMKAVNE 217          
BLAST of mRNA_Ecto-sp9_F_contig1133.1144.1 vs.
Match: Uncharacterized (protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KSW5_PHYPA)

HSP 1 Score: 97.8 bits (242), Expect = 3.720e-20
Identity = 52/166 (31.33%), Postives = 95/166 (57.23%), Query Frame = 0
Query:  131 LVFLCQAMNDAILEMCVENKGRPLAKSMTDFVEFSMEGLASGYSKEQLLLELQ-----LLDSTTRVPGQTLTGVEKRYRTQWISALDFVMQNLKFIDEQEPKSVEEFHIKSQASVDVVMRGRQTNDEQTFVKFDKALATGGVAGGVATECIAISPQMVPLSQLVLL 291
            L  +C+ ++    E+CV+N GR   +++ +FV  +++   +GY+ ++L L++      + +      G  LT  E+ YRTQW++ +   +Q LK  D +   S    +++    +   + G++  +EQ+ VKFD+ LAT G +GG  +E + ISPQ VP++Q+VLL
Sbjct:  100 LDDVCRRLHLCFFEICVQNLGRSAGQALHEFVCAAVDAFMAGYTFDRLNLQIVHGSGGMEEFKMENAGYRLTASEEYYRTQWLTTIYVTLQMLKVADNEASASFVTENLQLVQIIHRTLEGQRHGEEQSLVKFDRGLATKGASGGAVSEKLVISPQWVPVTQIVLL 265          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1133.1144.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
Uncharacterized1.440e-17585.67protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.050e-13198.98protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.890e-2737.64protein n=1 Tax=Klebsormidium nitens TaxID=105231 ... [more]
Uncharacterized1.480e-2634.81protein n=2 Tax=Marchantia polymorpha TaxID=3197 R... [more]
Uncharacterized2.200e-2635.16protein n=1 Tax=Chara braunii TaxID=69332 RepID=A0... [more]
Uncharacterized3.570e-2136.84protein n=2 Tax=Vitrella brassicaformis TaxID=1169... [more]
Uncharacterized3.720e-2031.33protein n=2 Tax=Physcomitrium patens TaxID=3218 Re... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 37..306
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 29..36
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..36
NoneNo IPR availablePROSITEPS51257PROKAR_LIPOPROTEINcoord: 1..26
score: 7.0
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..28
score: 0.778

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1133contigEcto-sp9_F_contig1133:3866..6616 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1133.1144.1mRNA_Ecto-sp9_F_contig1133.1144.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1133 3831..7694 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1133.1144.1 ID=prot_Ecto-sp9_F_contig1133.1144.1|Name=mRNA_Ecto-sp9_F_contig1133.1144.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=307bp
MRCVCRRPFRAINARWLLSVLIVVACQATSTLRSRGATPAATSTCSARSS
SAGSTSTCRASRSAFLLSARCRTAFRSQPHRRGVPTRRGTHHRSRRYFPH
RYTELLRMGARSGDGSYRGGPAGPRPKKRPLVFLCQAMNDAILEMCVENK
GRPLAKSMTDFVEFSMEGLASGYSKEQLLLELQLLDSTTRVPGQTLTGVE
KRYRTQWISALDFVMQNLKFIDEQEPKSVEEFHIKSQASVDVVMRGRQTN
DEQTFVKFDKALATGGVAGGVATECIAISPQMVPLSQLVLLGIRALQKLE
DAAERS*
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