prot_Ecto-sp9_F_contig11328.1142.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11328.1142.1
Unique Nameprot_Ecto-sp9_F_contig11328.1142.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length180
Homology
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BLAST of mRNA_Ecto-sp9_F_contig11328.1142.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FGV3_ECTSI)

HSP 1 Score: 339 bits (870), Expect = 4.950e-107
Identity = 173/179 (96.65%), Postives = 174/179 (97.21%), Query Frame = 0 
Query:    1 METVSKEEDSAVGAGDIVSNDERNVRRWRLGQLGFITETALWMLVVNAVAHEGRGGFDGEAAGLARAERRSLHDELLELFDTRLDEHASLWENLSRGEGGRAPVSISPAFVAHVKGMIQGWLDQARVSKKERDATTPKSRAGKSGRRAAGGLWSPPRVGGSAMMRQASDMSVSKTPAIN 179
            METVS EEDSAVGAGDIVSNDERNVRRWRLGQLGFITETALWMLVVNAVAHEGR G DGEAAGLA AERRSLHDELLELFDTRLDEHASLWENLSRGEGGRAPVSISPAFVAHVKGMIQGWLDQAR SKKERDATTPKSRAGKSGRRAAGG+WSPPRVGGSAMMRQASDMSVSKTPAIN
Sbjct:  939 METVSNEEDSAVGAGDIVSNDERNVRRWRLGQLGFITETALWMLVVNAVAHEGRDGLDGEAAGLAPAERRSLHDELLELFDTRLDEHASLWENLSRGEGGRAPVSISPAFVAHVKGMIQGWLDQARASKKERDATTPKSRAGKSGRRAAGGVWSPPRVGGSAMMRQASDMSVSKTPAIN 1117
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BLAST of mRNA_Ecto-sp9_F_contig11328.1142.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJX9_9PHAE)

HSP 1 Score: 337 bits (863), Expect = 2.890e-104
Identity = 171/179 (95.53%), Postives = 174/179 (97.21%), Query Frame = 0 
Query:    1 METVSKEEDSAVGAGDIVSNDERNVRRWRLGQLGFITETALWMLVVNAVAHEGRGGFDGEAAGLARAERRSLHDELLELFDTRLDEHASLWENLSRGEGGRAPVSISPAFVAHVKGMIQGWLDQARVSKKERDATTPKSRAGKSGRRAAGGLWSPPRVGGSAMMRQASDMSVSKTPAIN 179
            METVSKEEDSAVGAGDIVSNDERNVRRWRLGQLGFITETALWMLVVNAVAHEGRGG DG AAGLA+AERRSLHDELLELFDTRLDEHASLWENLSRGEGGRAPVSISPAFVAHVKGMIQGWLDQAR SKKERD TTPKSRAGKSG RAAGGLWSPPRVGG+AMMRQASDMSVS+TPAIN
Sbjct: 1348 METVSKEEDSAVGAGDIVSNDERNVRRWRLGQLGFITETALWMLVVNAVAHEGRGGLDGVAAGLAQAERRSLHDELLELFDTRLDEHASLWENLSRGEGGRAPVSISPAFVAHVKGMIQGWLDQARASKKERDTTTPKSRAGKSGWRAAGGLWSPPRVGGAAMMRQASDMSVSRTPAIN 1526
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11328.1142.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized4.950e-10796.65protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.890e-10495.53protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11328contigEcto-sp9_F_contig11328:770..3783 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11328.1142.1mRNA_Ecto-sp9_F_contig11328.1142.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11328 721..3937 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11328.1142.1 ID=prot_Ecto-sp9_F_contig11328.1142.1|Name=mRNA_Ecto-sp9_F_contig11328.1142.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=180bp
METVSKEEDSAVGAGDIVSNDERNVRRWRLGQLGFITETALWMLVVNAVA
HEGRGGFDGEAAGLARAERRSLHDELLELFDTRLDEHASLWENLSRGEGG
RAPVSISPAFVAHVKGMIQGWLDQARVSKKERDATTPKSRAGKSGRRAAG
GLWSPPRVGGSAMMRQASDMSVSKTPAIN*
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