prot_Ecto-sp9_F_contig11317.1136.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11317.1136.1
Unique Nameprot_Ecto-sp9_F_contig11317.1136.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length115
Homology
BLAST of mRNA_Ecto-sp9_F_contig11317.1136.1 vs.
Match: Peptidylprolyl (isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KZT2_9PHAE)

HSP 1 Score: 218 bits (555), Expect = 1.410e-66
Identity = 112/115 (97.39%), Postives = 114/115 (99.13%), Query Frame = 0
Query:    1 MEEVKGQSLKVISELVVNEAINNLDLKAIGSAELVQDISVVTQLFTPGAPMMLEVKMDVWPEVNIVKEYTGFELEVEEPPIDEPRVAAAWKGLQERNVVLEDTEESYAAQLGDSV 115
            MEEVKGQSLKVISE+VVNEAINNLD+KAIGSAELVQDISVVTQLFTPGAPMMLEVKMDVWPEVNIVKEYTGFELEVEEPPIDEPRVAAAWKGLQERNVVLEDTEE YAAQLGDSV
Sbjct:  127 MEEVKGQSLKVISEVVVNEAINNLDVKAIGSAELVQDISVVTQLFTPGAPMMLEVKMDVWPEVNIVKEYTGFELEVEEPPIDEPRVAAAWKGLQERNVVLEDTEEGYAAQLGDSV 241          
BLAST of mRNA_Ecto-sp9_F_contig11317.1136.1 vs.
Match: Peptidylprolyl (isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEY7_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 1.900e-16
Identity = 45/112 (40.18%), Postives = 64/112 (57.14%), Query Frame = 0
Query:    4 VKGQSLKVISELVVNEAINNLDLKAIGSAELVQDISVVTQLFTPGAPMMLEVKMDVWPEVNIVKEYTGFELEVEEPPIDEPRVAAAWKGLQERNVVLEDTEESYAAQLGDSV 115
            +K  +L++I++  V +AI +  ++AIG AELVQD   +    TPG P+ L+VK+D+WPEV     YTGF +  E P  D+ R  A    L+ER          YAA  GD+V
Sbjct:   72 IKTSALELITDSAVKKAIEDAGVRAIGQAELVQDPESLVATLTPGEPLHLDVKVDIWPEVKYNGPYTGFMVTAEAPAFDKERYDATMDRLRERACTTAAAPADYAAGKGDAV 183          
BLAST of mRNA_Ecto-sp9_F_contig11317.1136.1 vs.
Match: Peptidylprolyl (isomerase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z9T8_NANGC)

HSP 1 Score: 76.6 bits (187), Expect = 5.610e-14
Identity = 37/109 (33.94%), Postives = 65/109 (59.63%), Query Frame = 0
Query:    6 GQSLKVISELVVNEAINNLDLKAIGSAELVQDISVVTQLFTPGAPMMLEVKMDVWPEVNIVKEYTGFELEVEEPPIDEPRVAAAWKGLQERNVVLEDTEESYAAQLGDS 114
             ++L ++ E  + +AI+  D+KA+G A LV     +   F PG P+++E+ +DV+PEV     Y G +++V+  P++  +V  A + L+++ V L DT   Y  +LGDS
Sbjct:  119 NEALDILCEDALKKAIDESDVKAVGQASLVSHPETLIAAFKPGEPIVMELTVDVYPEVEFTGPYAGLKVQVDRIPLENEKVKQALESLRKKRVRLVDTAPGYEGKLGDS 227          
BLAST of mRNA_Ecto-sp9_F_contig11317.1136.1 vs.
Match: Peptidylprolyl (isomerase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XSM2_9STRA)

HSP 1 Score: 70.5 bits (171), Expect = 8.070e-12
Identity = 39/114 (34.21%), Postives = 63/114 (55.26%), Query Frame = 0
Query:    2 EEVKGQSLKVISELVVNEAINNLDLKAIGSAELVQDISVVTQLFTPGAPMMLEVKMDVWPEVNIVKEYTGFELEVEEPPIDEPRVAAAWKGLQERNVVLEDTEESYAAQLGDSV 115
            E +   +++ I+E  V++AI    ++AIG AEL+    ++   +TPG P+ LEVK+DVWPE+       G  +E E P  ++     A KGL++R     D E    A +GD++
Sbjct:   72 EALTSGAMETIAETFVSDAIKQSGVQAIGQAELMTPAELIVASYTPGEPLDLEVKVDVWPELEFTGSLEGHTIEAEAPQYNQTAYDLAMKGLRQRYAKTADKE--GGAAIGDAL 183          
BLAST of mRNA_Ecto-sp9_F_contig11317.1136.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZBK1_9RHOD)

HSP 1 Score: 67.8 bits (164), Expect = 4.770e-11
Identity = 39/110 (35.45%), Postives = 59/110 (53.64%), Query Frame = 0
Query:    4 VKGQSLKVISELVVNEAINNLDLKAIGSAEL-VQDISVVTQLFTPGAPMMLEVKMDVWPEVNIVKEYTGFELEVEEPPIDEPRVAAAWKGLQERNVVLEDTEESYAAQLG 112
            V G + + +  + V +A+   ++  IG AEL V D+  +   F PG+P    +K+DVWPE  IV EY G E+E EE P DE  +  A   LQ+++       +   A+LG
Sbjct:   71 VYGSACEELFNISVGKALKESNVNFIGQAELDVDDVEKLIAEFHPGSPFSFGIKIDVWPETEIVGEYKGLEIEAEEEPFDERLIDEALVELQKKHSSTMLAGDGSVAELG 180          
BLAST of mRNA_Ecto-sp9_F_contig11317.1136.1 vs.
Match: Trigger (factor n=7 Tax=Sphaerospermopsis TaxID=752201 RepID=A0A1Z4UQY2_9CYAN)

HSP 1 Score: 55.5 bits (132), Expect = 1.490e-6
Identity = 36/110 (32.73%), Postives = 56/110 (50.91%), Query Frame = 0
Query:    4 VKGQSLKVISELVVNEAINNLDLKAIGSAELVQDISVVTQLFTPGAPMMLEVKMDVWPEVNIVKEYTGFELEVEEPPIDEPRVAAAWKGLQERNVVLEDTEESYAAQLGD 113
            +K   L+ +   VV +A+   D+KAIG   LV     +   + PG P+     +DV PE+ I ++YTGF+++ EE   D  RV       +++   L   E   AAQ+GD
Sbjct:   63 IKASVLEELIPEVVEQAVKQEDIKAIGQPRLVSSFDDLINNYKPGEPLTFAAAVDVEPEIKI-QQYTGFQVKAEEIKHDPTRVDTVLDQERQKMSTLIPVE-GRAAQIGD 170          
BLAST of mRNA_Ecto-sp9_F_contig11317.1136.1 vs.
Match: Trigger (factor n=2 Tax=unclassified Sphaerospermopsis TaxID=2646443 RepID=A0A6P0ZBS0_9CYAN)

HSP 1 Score: 53.1 bits (126), Expect = 9.600e-6
Identity = 34/110 (30.91%), Postives = 55/110 (50.00%), Query Frame = 0
Query:    4 VKGQSLKVISELVVNEAINNLDLKAIGSAELVQDISVVTQLFTPGAPMMLEVKMDVWPEVNIVKEYTGFELEVEEPPIDEPRVAAAWKGLQERNVVLEDTEESYAAQLGD 113
            +K   L+ +   +V EA+   D+ AIG   L+     +   + PG P+ +   +DV PEV I+ +YTGF+++ EE   D  +V       +++   L   E    AQLGD
Sbjct:   63 IKASVLEELIPEIVEEAVKQEDIAAIGQPRLLSSFDDLINNYEPGQPLTVAASVDVEPEV-IINKYTGFQVQAEEIKYDSTKVDKILDEKRQQMATLIPVE-GRPAQLGD 170          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11317.1136.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
Peptidylprolyl1.410e-6697.39isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6... [more]
Peptidylprolyl1.900e-1640.18isomerase n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
Peptidylprolyl5.610e-1433.94isomerase n=3 Tax=Monodopsidaceae TaxID=425072 Rep... [more]
Peptidylprolyl8.070e-1234.21isomerase n=1 Tax=Phaeomonas parva TaxID=124430 Re... [more]
Hypothetical4.770e-1135.45protein (Fragment) n=1 Tax=Timspurckia oligopyreno... [more]
Trigger1.490e-632.73factor n=7 Tax=Sphaerospermopsis TaxID=752201 RepI... [more]
Trigger9.600e-630.91factor n=2 Tax=unclassified Sphaerospermopsis TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008881Trigger factor, ribosome-binding, bacterialPFAMPF05697Trigger_Ncoord: 3..89
e-value: 1.5E-7
score: 31.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11317contigEcto-sp9_F_contig11317:258..3669 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11317.1136.1mRNA_Ecto-sp9_F_contig11317.1136.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11317 234..3669 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11317.1136.1 ID=prot_Ecto-sp9_F_contig11317.1136.1|Name=mRNA_Ecto-sp9_F_contig11317.1136.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=115bp
MEEVKGQSLKVISELVVNEAINNLDLKAIGSAELVQDISVVTQLFTPGAP
MMLEVKMDVWPEVNIVKEYTGFELEVEEPPIDEPRVAAAWKGLQERNVVL
EDTEESYAAQLGDSV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008881Trigger_fac_ribosome-bd_bac