prot_Ecto-sp9_F_contig11315.1132.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11315.1132.1
Unique Nameprot_Ecto-sp9_F_contig11315.1132.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length71
Homology
BLAST of mRNA_Ecto-sp9_F_contig11315.1132.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1SSU8_9CHLO)

HSP 1 Score: 112 bits (281), Expect = 2.060e-30
Identity = 52/67 (77.61%), Postives = 63/67 (94.03%), Query Frame = 0
Query:    5 QVIVTTPEKWDIITRKAGDRTYTQLVRLVIIDEIHLLHDNRGPVLESLVARTIRQIESTQVSLFFLG 71
            Q+IVTTPEKWDIITRK+G+RTYTQLVRL+IIDE+HLLHD+RGPVLES+VART+RQ+ESTQ  +  +G
Sbjct:   62 QIIVTTPEKWDIITRKSGERTYTQLVRLLIIDEVHLLHDDRGPVLESIVARTVRQVESTQEMVRIVG 128          
BLAST of mRNA_Ecto-sp9_F_contig11315.1132.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHW4_ECTSI)

HSP 1 Score: 119 bits (299), Expect = 7.820e-30
Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 0
Query:    5 QVIVTTPEKWDIITRKAGDRTYTQLVRLVIIDEIHLLHDNRGPVLESLVARTIRQIESTQVSLFFLG 71
            QVIVTTPEKWDIITRKAGDRTYTQLVRLVIIDEIHLLHDNRGPVLESLVARTIRQIE+TQ  +  +G
Sbjct:  631 QVIVTTPEKWDIITRKAGDRTYTQLVRLVIIDEIHLLHDNRGPVLESLVARTIRQIEATQEMVRIVG 697          
BLAST of mRNA_Ecto-sp9_F_contig11315.1132.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0HVE9_9EUKA)

HSP 1 Score: 112 bits (281), Expect = 1.680e-29
Identity = 53/69 (76.81%), Postives = 64/69 (92.75%), Query Frame = 0
Query:    3 LDQVIVTTPEKWDIITRKAGDRTYTQLVRLVIIDEIHLLHDNRGPVLESLVARTIRQIESTQVSLFFLG 71
            + ++I+TTPEKWDIITRK+GDRTYTQLVRLVIIDEIHLLHD+RGPVLES+VART+RQIE+TQ  +  +G
Sbjct:   32 IKKLIITTPEKWDIITRKSGDRTYTQLVRLVIIDEIHLLHDHRGPVLESIVARTVRQIETTQEMIRVVG 100          
BLAST of mRNA_Ecto-sp9_F_contig11315.1132.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2E0_HETAK)

HSP 1 Score: 112 bits (280), Expect = 4.470e-29
Identity = 53/60 (88.33%), Postives = 60/60 (100.00%), Query Frame = 0
Query:    5 QVIVTTPEKWDIITRKAGDRTYTQLVRLVIIDEIHLLHDNRGPVLESLVARTIRQIESTQ 64
            QVIVTTPEKWDIITRKAGDRTYTQLVRL+IIDE+HLLHD+RGPVLE+LVART+R+IE+TQ
Sbjct:  184 QVIVTTPEKWDIITRKAGDRTYTQLVRLMIIDEVHLLHDDRGPVLEALVARTVRRIETTQ 243          
BLAST of mRNA_Ecto-sp9_F_contig11315.1132.1 vs.
Match: (rape) (hypothetical protein n=2 Tax=Brassica TaxID=3705 RepID=A0A816IJM1_BRANA)

HSP 1 Score: 115 bits (287), Expect = 4.480e-29
Identity = 54/67 (80.60%), Postives = 64/67 (95.52%), Query Frame = 0
Query:    5 QVIVTTPEKWDIITRKAGDRTYTQLVRLVIIDEIHLLHDNRGPVLESLVARTIRQIESTQVSLFFLG 71
            Q+IVTTPEKWDIITRK+GDRTYTQLVRL+IIDEIHLLHDNRGPVLES+VART+RQIE+T+ ++  +G
Sbjct:   71 QIIVTTPEKWDIITRKSGDRTYTQLVRLLIIDEIHLLHDNRGPVLESIVARTLRQIETTKENIRLVG 137          
BLAST of mRNA_Ecto-sp9_F_contig11315.1132.1 vs.
Match: Uncharacterized (protein n=1 Tax=Brassica oleracea var. oleracea TaxID=109376 RepID=A0A0D3BL12_BRAOL)

HSP 1 Score: 115 bits (287), Expect = 6.630e-29
Identity = 54/67 (80.60%), Postives = 64/67 (95.52%), Query Frame = 0
Query:    5 QVIVTTPEKWDIITRKAGDRTYTQLVRLVIIDEIHLLHDNRGPVLESLVARTIRQIESTQVSLFFLG 71
            Q+IVTTPEKWDIITRK+GDRTYTQLVRL+IIDEIHLLHDNRGPVLES+VART+RQIE+T+ ++  +G
Sbjct:  100 QIIVTTPEKWDIITRKSGDRTYTQLVRLLIIDEIHLLHDNRGPVLESIVARTLRQIETTKENIRLVG 166          
BLAST of mRNA_Ecto-sp9_F_contig11315.1132.1 vs.
Match: Uncharacterized (protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5VCR9_9CNID)

HSP 1 Score: 115 bits (289), Expect = 1.750e-28
Identity = 56/67 (83.58%), Postives = 62/67 (92.54%), Query Frame = 0
Query:    5 QVIVTTPEKWDIITRKAGDRTYTQLVRLVIIDEIHLLHDNRGPVLESLVARTIRQIESTQVSLFFLG 71
            QVIV TPEKWDIITRKAGDRTYTQLVRL+IIDEIHLLHDNRGPVLE+++ARTIRQIESTQ  +  +G
Sbjct:  586 QVIVCTPEKWDIITRKAGDRTYTQLVRLIIIDEIHLLHDNRGPVLEAIIARTIRQIESTQEPVRLVG 652          
BLAST of mRNA_Ecto-sp9_F_contig11315.1132.1 vs.
Match: Uncharacterized (protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DUR0_EMIHU)

HSP 1 Score: 115 bits (289), Expect = 1.750e-28
Identity = 57/67 (85.07%), Postives = 63/67 (94.03%), Query Frame = 0
Query:    5 QVIVTTPEKWDIITRKAGDRTYTQLVRLVIIDEIHLLHDNRGPVLESLVARTIRQIESTQVSLFFLG 71
            Q+IVTTPEKWDIITRKAGDRTYTQLVRLVIIDEIHLLHD+RGPVLES+VARTIRQIE+TQ  +  +G
Sbjct:  602 QLIVTTPEKWDIITRKAGDRTYTQLVRLVIIDEIHLLHDHRGPVLESIVARTIRQIETTQEMIRVVG 668          
BLAST of mRNA_Ecto-sp9_F_contig11315.1132.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Coccolithales TaxID=418917 RepID=A0A7S0NX78_9EUKA)

HSP 1 Score: 115 bits (289), Expect = 1.750e-28
Identity = 57/67 (85.07%), Postives = 63/67 (94.03%), Query Frame = 0
Query:    5 QVIVTTPEKWDIITRKAGDRTYTQLVRLVIIDEIHLLHDNRGPVLESLVARTIRQIESTQVSLFFLG 71
            QVIVTTPEKWDIITRK+GDRTYTQLVRLVIIDEIHLLHD+RGPVLES+VARTIRQIE+TQ  +  +G
Sbjct:  634 QVIVTTPEKWDIITRKSGDRTYTQLVRLVIIDEIHLLHDHRGPVLESIVARTIRQIETTQEMIRVVG 700          
BLAST of mRNA_Ecto-sp9_F_contig11315.1132.1 vs.
Match: Uncharacterized (protein n=2 Tax=Sorghum bicolor TaxID=4558 RepID=A0A1B6QH23_SORBI)

HSP 1 Score: 115 bits (289), Expect = 1.750e-28
Identity = 54/67 (80.60%), Postives = 64/67 (95.52%), Query Frame = 0
Query:    5 QVIVTTPEKWDIITRKAGDRTYTQLVRLVIIDEIHLLHDNRGPVLESLVARTIRQIESTQVSLFFLG 71
            QVIVTTPEKWDI+TRK+GDRTYTQLV+L+IIDEIHLLHDNRGPVLES+VART+RQIE+T+V +  +G
Sbjct:  649 QVIVTTPEKWDIVTRKSGDRTYTQLVKLLIIDEIHLLHDNRGPVLESIVARTVRQIETTKVHIRLVG 715          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11315.1132.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Hypothetical2.060e-3077.61protein (Fragment) n=1 Tax=Tetraselmis chuii TaxID... [more]
Uncharacterized7.820e-3089.55protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LHW4... [more]
Hypothetical1.680e-2976.81protein (Fragment) n=1 Tax=Phaeocystis antarctica ... [more]
Hypothetical4.470e-2988.33protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
(rape)4.480e-2980.60hypothetical protein n=2 Tax=Brassica TaxID=3705 R... [more]
Uncharacterized6.630e-2980.60protein n=1 Tax=Brassica oleracea var. oleracea Ta... [more]
Uncharacterized1.750e-2883.58protein n=1 Tax=Clytia hemisphaerica TaxID=252671 ... [more]
Uncharacterized1.750e-2885.07protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID... [more]
Hypothetical1.750e-2885.07protein (Fragment) n=2 Tax=Coccolithales TaxID=418... [more]
Uncharacterized1.750e-2880.60protein n=2 Tax=Sorghum bicolor TaxID=4558 RepID=A... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 5..60
e-value: 3.2E-6
score: 27.0
NoneNo IPR availableGENE3D3.40.50.300coord: 5..66
e-value: 4.1E-26
score: 93.6
NoneNo IPR availablePANTHERPTHR12131ATP-DEPENDENT RNA AND DNA HELICASEcoord: 5..67
NoneNo IPR availablePANTHERPTHR12131:SF12coord: 5..67
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 5..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11315contigEcto-sp9_F_contig11315:75..287 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11315.1132.1mRNA_Ecto-sp9_F_contig11315.1132.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11315 75..287 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11315.1132.1 ID=prot_Ecto-sp9_F_contig11315.1132.1|Name=mRNA_Ecto-sp9_F_contig11315.1132.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=71bp
VLLDQVIVTTPEKWDIITRKAGDRTYTQLVRLVIIDEIHLLHDNRGPVLE
SLVARTIRQIESTQVSLFFLG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase