prot_Ecto-sp9_F_contig11292.1110.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11292.1110.1
Unique Nameprot_Ecto-sp9_F_contig11292.1110.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length118
Homology
BLAST of mRNA_Ecto-sp9_F_contig11292.1110.1 vs.
Match: Ribonucleoside-diphosphate (reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZT8_ECTSI)

HSP 1 Score: 235 bits (600), Expect = 4.760e-71
Identity = 118/118 (100.00%), Postives = 118/118 (100.00%), Query Frame = 0
Query:    1 MFVIKRDGRKETVSFDKITARISHLCYGLDPKYVEPTLIAQKVISGVYPGVTTSELDELAAQTAAYQATQHPDMSLLAARISVSNLHKCTWKTFSKTIEMLHTYVLPQTGERSSLISD 118
            MFVIKRDGRKETVSFDKITARISHLCYGLDPKYVEPTLIAQKVISGVYPGVTTSELDELAAQTAAYQATQHPDMSLLAARISVSNLHKCTWKTFSKTIEMLHTYVLPQTGERSSLISD
Sbjct:    1 MFVIKRDGRKETVSFDKITARISHLCYGLDPKYVEPTLIAQKVISGVYPGVTTSELDELAAQTAAYQATQHPDMSLLAARISVSNLHKCTWKTFSKTIEMLHTYVLPQTGERSSLISD 118          
BLAST of mRNA_Ecto-sp9_F_contig11292.1110.1 vs.
Match: ATP-cone (domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SL51_9ARCH)

HSP 1 Score: 157 bits (397), Expect = 2.480e-47
Identity = 78/118 (66.10%), Postives = 96/118 (81.36%), Query Frame = 0
Query:    1 MFVIKRDGRKETVSFDKITARISHLCYGLDPKYVEPTLIAQKVISGVYPGVTTSELDELAAQTAAYQATQHPDMSLLAARISVSNLHKCTWKTFSKTIEMLHTYVLPQTGERSSLISD 118
            M+VIKRDGR+E V FDKIT+RI+ LCYGLDP +V+ T+I+QKV+ G+YPGVTT ELDELAAQTAA  AT+HPD S LAARISVSNLHK T K FS  +E+L  +V P TG+ + L+S+
Sbjct:    1 MYVIKRDGRRENVHFDKITSRINKLCYGLDPNHVDATIISQKVVPGLYPGVTTFELDELAAQTAASCATRHPDFSTLAARISVSNLHKQTSKVFSDVVELLRNHVHPATGQPAPLVSE 118          
BLAST of mRNA_Ecto-sp9_F_contig11292.1110.1 vs.
Match: Ribonucleoside-diphosphate (reductase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8D6Y3_PHYNI)

HSP 1 Score: 160 bits (404), Expect = 6.040e-46
Identity = 81/118 (68.64%), Postives = 96/118 (81.36%), Query Frame = 0
Query:    1 MFVIKRDGRKETVSFDKITARISHLCYGLDPKYVEPTLIAQKVISGVYPGVTTSELDELAAQTAAYQATQHPDMSLLAARISVSNLHKCTWKTFSKTIEMLHTYVLPQTGERSSLISD 118
            M+VIKRDGR+E V FDKITARI+ LCYGL+P YV+   I+QKV++GVYPGVTTSELDELAA+TAAYQ+TQHPD S LAARI+VSNLHK T K FS  IE+ H  V  +TG  + LI+D
Sbjct:    1 MYVIKRDGRREDVKFDKITARITKLCYGLNPDYVDAVKISQKVVAGVYPGVTTSELDELAAETAAYQSTQHPDFSKLAARIAVSNLHKNTNKVFSDNIEVFHKNVHEKTGAAAPLIAD 118          
BLAST of mRNA_Ecto-sp9_F_contig11292.1110.1 vs.
Match: Ribonucleoside-diphosphate (reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5N1_9STRA)

HSP 1 Score: 165 bits (418), Expect = 3.010e-45
Identity = 84/118 (71.19%), Postives = 95/118 (80.51%), Query Frame = 0
Query:    1 MFVIKRDGRKETVSFDKITARISHLCYGLDPKYVEPTLIAQKVISGVYPGVTTSELDELAAQTAAYQATQHPDMSLLAARISVSNLHKCTWKTFSKTIEMLHTYVLPQTGERSSLISD 118
            M+V+KRDGR E V FDKIT+RI  LCYGLD +YV+P +++QKVI GVYPGVTTSELDELAAQTAAY ATQHP  S LAARISVSNLHK T K FS  IE LH YV P+T + + LISD
Sbjct:    1 MYVVKRDGRSEAVYFDKITSRIKKLCYGLDDRYVDPIILSQKVIQGVYPGVTTSELDELAAQTAAYMATQHPGWSQLAARISVSNLHKGTCKLFSDNIERLHKYVHPKTKQPAPLISD 118          
BLAST of mRNA_Ecto-sp9_F_contig11292.1110.1 vs.
Match: Ribonucleoside-diphosphate (reductase (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B7C0_9STRA)

HSP 1 Score: 165 bits (418), Expect = 3.470e-45
Identity = 82/118 (69.49%), Postives = 97/118 (82.20%), Query Frame = 0
Query:    1 MFVIKRDGRKETVSFDKITARISHLCYGLDPKYVEPTLIAQKVISGVYPGVTTSELDELAAQTAAYQATQHPDMSLLAARISVSNLHKCTWKTFSKTIEMLHTYVLPQTGERSSLISD 118
            M+V KRDGR++ V FDKIT RI  LCYGL+ ++VEP LIA+KV+ GVY GVTTSELDELAAQTAAYQ+T+HPD S+LAARISVSNLHK T KTFS  IE  H Y+ P+TG+ + LISD
Sbjct:   41 MYVFKRDGRRQAVHFDKITTRIKKLCYGLNQQFVEPVLIAKKVVEGVYKGVTTSELDELAAQTAAYQSTKHPDFSILAARISVSNLHKETIKTFSDVIENFHKYIHPKTGQPAPLISD 158          
BLAST of mRNA_Ecto-sp9_F_contig11292.1110.1 vs.
Match: Ribonucleoside-diphosphate (reductase (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S2A3_9STRA)

HSP 1 Score: 157 bits (396), Expect = 8.450e-45
Identity = 82/118 (69.49%), Postives = 96/118 (81.36%), Query Frame = 0
Query:    1 MFVIKRDGRKETVSFDKITARISHLCYGLDPKYVEPTLIAQKVISGVYPGVTTSELDELAAQTAAYQATQHPDMSLLAARISVSNLHKCTWKTFSKTIEMLHTYVLPQTGERSSLISD 118
            M+V KRDGR+E+V FDKIT+RIS LCYGLD K+V+P  I+QKVI GVYPGVTT+ELDELAAQTAA  AT HPD S+LAARISVSNLHK T KTFS TI  L+  + P+T E + LIS+
Sbjct:    4 MYVQKRDGRRESVYFDKITSRISKLCYGLDVKFVDPVAISQKVIQGVYPGVTTTELDELAAQTAASFATHHPDASILAARISVSNLHKMTNKTFSDTIHGLYKCIHPKTKESAPLISE 121          
BLAST of mRNA_Ecto-sp9_F_contig11292.1110.1 vs.
Match: Ribonucleoside-diphosphate (reductase subunit alpha (Fragment) n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A7Y2A0E8_9FLAO)

HSP 1 Score: 151 bits (381), Expect = 1.510e-44
Identity = 76/117 (64.96%), Postives = 94/117 (80.34%), Query Frame = 0
Query:    1 MFVIKRDGRKETVSFDKITARISHLCYGLDPKYVEPTLIAQKVISGVYPGVTTSELDELAAQTAAYQATQHPDMSLLAARISVSNLHKCTWKTFSKTIEMLHTYVLPQTGERSSLIS 117
            M V+KR G++ETVSFDKITARI  LCYGL+  Y+EP  I +KVI G+Y GVTT+ELD LAA+TAA  AT HPD +LLAARI+VSNLHK T K+FS+T+E L+ YV P+TG+ + LIS
Sbjct:    1 MQVVKRSGKRETVSFDKITARIKKLCYGLEQNYIEPIEIGKKVIQGLYDGVTTTELDNLAAETAATMATSHPDYALLAARIAVSNLHKNTKKSFSETVEGLYNYVDPKTGKNAGLIS 117          
BLAST of mRNA_Ecto-sp9_F_contig11292.1110.1 vs.
Match: Ribonucleoside-diphosphate (reductase n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A7S4M9A0_9STRA)

HSP 1 Score: 163 bits (413), Expect = 1.680e-44
Identity = 84/117 (71.79%), Postives = 97/117 (82.91%), Query Frame = 0
Query:    1 MFVIKRDGRKETVSFDKITARISHLCYGLDPKYVEPTLIAQKVISGVYPGVTTSELDELAAQTAAYQATQHPDMSLLAARISVSNLHKCTWKTFSKTIEMLHTYVLPQTGERSSLIS 117
            MFV+KR+GR+E+V FDKIT+RIS LCYGLD K+V+P +I+QKVI GVYPGVTT ELDELAA+TAA  ATQHPD S+LAARISVSNLHK T KTFS  IE  H YV P+T E + LIS
Sbjct:    3 MFVVKRNGRRESVYFDKITSRISKLCYGLDNKHVDPVIISQKVIQGVYPGVTTVELDELAAETAASFATQHPDCSVLAARISVSNLHKMTTKTFSANIERFHKYVHPKTKEPAPLIS 119          
BLAST of mRNA_Ecto-sp9_F_contig11292.1110.1 vs.
Match: Ribonucleoside-diphosphate (reductase n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CXG1_SAPPC)

HSP 1 Score: 162 bits (411), Expect = 2.800e-44
Identity = 82/118 (69.49%), Postives = 94/118 (79.66%), Query Frame = 0
Query:    1 MFVIKRDGRKETVSFDKITARISHLCYGLDPKYVEPTLIAQKVISGVYPGVTTSELDELAAQTAAYQATQHPDMSLLAARISVSNLHKCTWKTFSKTIEMLHTYVLPQTGERSSLISD 118
            M+V+KRDGR E V FDKITARI+ LCYGLDP YV P LIAQKV++GVY GVTTSELDELAA+TAAYQATQHPD S LAARIS+SNLHK T K FS  IE+ +     +TG  + LI+D
Sbjct:    1 MYVVKRDGRSEEVKFDKITARINKLCYGLDPNYVNPILIAQKVVAGVYAGVTTSELDELAAETAAYQATQHPDFSKLAARISISNLHKSTHKVFSDNIELFYNNKHAKTGAPAPLIAD 118          
BLAST of mRNA_Ecto-sp9_F_contig11292.1110.1 vs.
Match: Ribonucleoside-diphosphate (reductase subunit alpha n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=UPI00199B53C4)

HSP 1 Score: 157 bits (396), Expect = 2.950e-44
Identity = 75/117 (64.10%), Postives = 98/117 (83.76%), Query Frame = 0
Query:    1 MFVIKRDGRKETVSFDKITARISHLCYGLDPKYVEPTLIAQKVISGVYPGVTTSELDELAAQTAAYQATQHPDMSLLAARISVSNLHKCTWKTFSKTIEMLHTYVLPQTGERSSLIS 117
            M+VIKRDGR+E+V FDKITARI  LCYGLDP +V+P  +A KV++G+Y GV+T+ELD LAA+TAA   T+HPD ++LAAR++VSNLHK T K+FS TI+ L+TYV P+TGE +SLI+
Sbjct:    1 MYVIKRDGRRESVKFDKITARIEKLCYGLDPTFVQPVEVAMKVVAGIYDGVSTAELDNLAAETAASMTTRHPDYAILAARVAVSNLHKNTQKSFSGTIKRLYTYVDPKTGENASLIA 117          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11292.1110.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Ribonucleoside-diphosphate4.760e-71100.00reductase n=1 Tax=Ectocarpus siliculosus TaxID=288... [more]
ATP-cone2.480e-4766.10domain-containing protein n=1 Tax=archaeon TaxID=1... [more]
Ribonucleoside-diphosphate6.040e-4668.64reductase n=1 Tax=Phytophthora nicotianae TaxID=47... [more]
Ribonucleoside-diphosphate3.010e-4571.19reductase n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
Ribonucleoside-diphosphate3.470e-4569.49reductase (Fragment) n=1 Tax=Corethron hystrix Tax... [more]
Ribonucleoside-diphosphate8.450e-4569.49reductase (Fragment) n=1 Tax=Eucampia antarctica T... [more]
Ribonucleoside-diphosphate1.510e-4464.96reductase subunit alpha (Fragment) n=1 Tax=Flavoba... [more]
Ribonucleoside-diphosphate1.680e-4471.79reductase n=2 Tax=Odontellaceae TaxID=2749909 RepI... [more]
Ribonucleoside-diphosphate2.800e-4469.49reductase n=4 Tax=Saprolegniaceae TaxID=4764 RepID... [more]
Ribonucleoside-diphosphate2.950e-4464.10reductase subunit alpha n=1 Tax=Sphingobacteriacea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005144ATP-cone domainPFAMPF03477ATP-conecoord: 1..88
e-value: 6.6E-18
score: 65.1
IPR005144ATP-cone domainPROSITEPS51161ATP_CONEcoord: 1..92
score: 17.907
IPR039718Ribonucleoside-diphosphate reductase large subunitPANTHERPTHR11573RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAINcoord: 1..118
NoneNo IPR availablePANTHERPTHR11573:SF24coord: 1..118
IPR008926Ribonucleotide reductase R1 subunit, N-terminalSUPERFAMILY48168R1 subunit of ribonucleotide reductase, N-terminal domaincoord: 6..113

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11292contigEcto-sp9_F_contig11292:988..2500 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11292.1110.1mRNA_Ecto-sp9_F_contig11292.1110.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11292 878..2500 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11292.1110.1 ID=prot_Ecto-sp9_F_contig11292.1110.1|Name=mRNA_Ecto-sp9_F_contig11292.1110.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=118bp
MFVIKRDGRKETVSFDKITARISHLCYGLDPKYVEPTLIAQKVISGVYPG
VTTSELDELAAQTAAYQATQHPDMSLLAARISVSNLHKCTWKTFSKTIEM
LHTYVLPQTGERSSLISD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR005144ATP-cone_dom
IPR039718Rrm1
IPR008926RNR_R1-su_N