prot_Ecto-sp9_F_contig1125.1079.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1125.1079.1
Unique Nameprot_Ecto-sp9_F_contig1125.1079.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length152
Homology
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BLAST of mRNA_Ecto-sp9_F_contig1125.1079.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KLV1_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 7.450e-13
Identity = 41/68 (60.29%), Postives = 48/68 (70.59%), Query Frame = 0 
Query:    1 YASSLELQLLSLVVCETFRSVQTLDMRIDGEKPLSLLSPTTSHATANDRSREVCNSSRVPAVQAYGVT 68
            YAS+LELQL+SL  C   R V TL +R+D + P SL SP  SHAT   RSRE C S+RVPAVQA G+T
Sbjct:   37 YASTLELQLVSLEFCGACRRVPTLHVRVDRQTPRSLWSPCKSHATTKKRSREACVSNRVPAVQASGLT 104
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BLAST of mRNA_Ecto-sp9_F_contig1125.1079.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNI6_9PHAE)

HSP 1 Score: 72.0 bits (175), Expect = 8.360e-12
Identity = 38/68 (55.88%), Postives = 49/68 (72.06%), Query Frame = 0 
Query:    1 YASSLELQLLSLVVCETFRSVQTLDMRIDGEKPLSLLSPTTSHATANDRSREVCNSSRVPAVQAYGVT 68
            Y S+LELQL+SL VC   R VQTL +R+  + P SL  P+ +H T N+RS +VC SSRVP VQA+G+T
Sbjct:   29 YVSTLELQLVSLEVCGACRRVQTLHVRVKPQTPPSLWFPSQNHTTTNNRSPKVCISSRVPVVQAFGLT 96
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BLAST of mRNA_Ecto-sp9_F_contig1125.1079.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z9_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 3.120e-5
Identity = 29/53 (54.72%), Postives = 36/53 (67.92%), Query Frame = 0 
Query:    1 YASSLELQLLSLVVCETFRSVQTLDMRIDGEKPLSLLSPTTSHATANDRSREV 53
            YAS+LELQL+SL  C   R V TL +R+D   P SL SP T+  TA+ RSR+V
Sbjct:   61 YASTLELQLVSLEFCGACRHVPTLHVRVDRRTPRSLWSPRTTPITAHKRSRKV 113
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1125.1079.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized7.450e-1360.29protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized8.360e-1255.88protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.120e-554.72protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1125contigEcto-sp9_F_contig1125:24752..25596 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1125.1079.1mRNA_Ecto-sp9_F_contig1125.1079.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1125 24752..25596 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1125.1079.1 ID=prot_Ecto-sp9_F_contig1125.1079.1|Name=mRNA_Ecto-sp9_F_contig1125.1079.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=152bp
YASSLELQLLSLVVCETFRSVQTLDMRIDGEKPLSLLSPTTSHATANDRS
REVCNSSRVPAVQAYGVTRLRGYWSAERLEPATCIQRLKRPRTWCRCRPP
YSRYRLVISSTSPSSEHSSYHRRAGGRSGYQQCGYDGVCNAGAPRSNPWR
S*
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