prot_Ecto-sp9_F_contig11241.1069.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11241.1069.1
Unique Nameprot_Ecto-sp9_F_contig11241.1069.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length142
Homology
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BLAST of mRNA_Ecto-sp9_F_contig11241.1069.1 vs.
Match: AAA_23 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8V1_9PHAE)

HSP 1 Score: 55.5 bits (132), Expect = 3.550e-6
Identity = 22/25 (88.00%), Postives = 23/25 (92.00%), Query Frame = 0 
Query:    1 DAAKHYDWVGGVGFSVTLVFRCFGD 25
            DAAKHYDWVGG GFSVTL FRCFG+
Sbjct:  640 DAAKHYDWVGGAGFSVTLFFRCFGE 664
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11241.1069.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
AAA_233.550e-688.00domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..99
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 56..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 100..142
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..55
NoneNo IPR availableTMHMMTMhelixcoord: 38..57
NoneNo IPR availableTMHMMTMhelixcoord: 78..100

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11241contigEcto-sp9_F_contig11241:3660..4085 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11241.1069.1mRNA_Ecto-sp9_F_contig11241.1069.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11241 3660..4085 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11241.1069.1 ID=prot_Ecto-sp9_F_contig11241.1069.1|Name=mRNA_Ecto-sp9_F_contig11241.1069.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=142bp
DAAKHYDWVGGVGFSVTLVFRCFGDSLEYSLPPGRSCFFLVAFTFAATLF
GTFRSGFDGGERGISGVYLGIPCAYLTRTIFGLTIPTLLCLCVCLYYFLS
PPEPGVLRPGFVGVRGQWSSDYGMHNYEYKPRPHPPPPPPPA
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