prot_Ecto-sp9_F_contig1124.1068.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig1124.1068.1
Unique Nameprot_Ecto-sp9_F_contig1124.1068.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length231
Homology
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: tRNA-dihydrouridine (synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM35_ECTSI)

HSP 1 Score: 459 bits (1180), Expect = 6.210e-161
Identity = 223/230 (96.96%), Postives = 225/230 (97.83%), Query Frame = 0
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGDTPECAFGSHVRDD 230
            YDELTTFVRAVKAAG+DHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHI GT EWG YGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSK+DPDTDDFRDAVDRAMAL PEGVLDEPVGDTPECAFGS VRDD
Sbjct:  150 YDELTTFVRAVKAAGIDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHITGTGEWGEYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKIDPDTDDFRDAVDRAMALLPEGVLDEPVGDTPECAFGSQVRDD 379          
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: Dus (domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ECZ8_BRELC)

HSP 1 Score: 159 bits (402), Expect = 2.210e-43
Identity = 90/218 (41.28%), Postives = 127/218 (58.26%), Query Frame = 0
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSS-DPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGD 217
            Y+EL  FV    +AGV H +VHARKCLLKGLST  NRTIPPLRYDVV+RL Q+FP+L   LNGG+ S+    E +  T           G+M+GRAAY +PW FR  D  +F +  +P  +RREI+ER ++   E+ ++     P       +    + KPL  L +G  G + F++E+S A  A+    P+    R+ ++ A+ + P+ VLDE V D
Sbjct:  166 YEELHYFVATAASAGVRHFIVHARKCLLKGLSTKENRTIPPLRYDVVYRLKQDFPDLSFTLNGGVQSIQHARELLNTTN--------ADGIMIGRAAYNNPWNFRDADRLIFDADRNPNLSRREIIERYLNYAEELQEKWGSNEPLSGSPYTMATSMLMKPLLSLFNGEFGGKAFKREVS-AQWAKKGPRPE---LREMIENAIKVLPDKVLDERVED 371          
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: Dus (domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GP67_PHYRM)

HSP 1 Score: 158 bits (400), Expect = 2.500e-43
Identity = 91/218 (41.74%), Postives = 127/218 (58.26%), Query Frame = 0
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSS-DPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGD 217
            Y+EL  FV  V +AGV H++VHARKC+LKGLST  NRTIPPLRYDVV++L Q+FPEL   LNGG+ S+    E +  T         V GVM+GRAAY  PW FR  D  +F +  +P  +RREI+ER ++    +  +     P  +    +    + KPL  L +G  G + F++E+S A  A+    P+    R+ ++ AM + P+ VLD  V D
Sbjct:  133 YEELHHFVATVASAGVRHIIVHARKCILKGLSTKDNRTIPPLRYDVVYQLKQDFPELSFTLNGGVQSIQHARELLDTTN--------VDGVMIGRAAYNTPWNFRDADRLIFNAERNPNLSRREIIERYLEYAENLQAKWGSTVPLGDSPYTMATSALMKPLLALFNGEIGGKAFKREIS-AQWAKKGPRPE---LREMIENAMKVLPDEVLDARVED 338          
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: Dus (domain-containing protein n=25 Tax=Peronosporaceae TaxID=4777 RepID=G4ZWL3_PHYSP)

HSP 1 Score: 158 bits (400), Expect = 4.090e-43
Identity = 92/218 (42.20%), Postives = 126/218 (57.80%), Query Frame = 0
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSS-DPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGD 217
            Y+EL  +V +V  AGV H++VHARKCLLKGLST  NRTIPPLRYDVV+RL Q+FPEL   LNGG+ S+    E +  T         V GVM+GRAAY  PW FR  D  +F +  +P  +RREI+ R +D    +  +     P  +    +    + KPL  L +G  G + F++E+S A  A+    P+    R+ ++ AM + P+ VLD  V D
Sbjct:  161 YEELHHYVSSVTEAGVRHIIVHARKCLLKGLSTKDNRTIPPLRYDVVYRLKQDFPELSFTLNGGVQSIQHARELLDTTN--------VDGVMIGRAAYNTPWNFRDADRLIFNAERNPNLSRREIIARYLDYAEGLQAKWGSTEPLSDSPYTMATSALMKPLLSLFNGEFGGKAFKREIS-AQWAKKGPRPE---LREMIESAMKVLPDEVLDARVED 366          
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQW7_PYTOL)

HSP 1 Score: 153 bits (386), Expect = 2.710e-41
Identity = 90/218 (41.28%), Postives = 124/218 (56.88%), Query Frame = 0
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFG-SSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGD 217
            Y+EL  F+  V +AGV H +VHARKCLL GLST  NRTIPPL+YD V+RL ++FPEL   LNGG+ S+    E +  T         + GVM+GRAAY  PW FR  D  +FG +S+P  +RREI+   +D   +M  +     P  +    +    + KPL  L SGA G + F+    RA+ AQ        + R+ ++ A+A+ P+ VLD  V D
Sbjct:  141 YEELHHFITTVASAGVTHFIVHARKCLLNGLSTHENRTIPPLKYDWVYRLKEDFPELFFTLNGGVQSIQHAKELLDTTY--------IDGVMIGRAAYNTPWNFRDADRLIFGEASNPNLSRREIIADYLDYAEDMQTKWGVTEPITDVPYCMPTSALMKPLLALFSGAAGGKAFK----RAISAQFAQRGPKPEIRELIETALAVVPDEVLDLRVED 346          
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: Dus-domain-containing (protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AFC1_PLAHL)

HSP 1 Score: 153 bits (387), Expect = 3.620e-41
Identity = 87/218 (39.91%), Postives = 124/218 (56.88%), Query Frame = 0
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSS-DPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGD 217
            Y+EL  +V  V +AGV H++VHARKCLLKGLS   NRT+PPLRYDVV+RL Q+FPEL   LNGG+ S+    E +  T         V G+M+GRAAY  PW FR  D  +F +  +P  +RREI+++ ++    +  +     P       +    + KPL  L +G  G + F++E+S A  A+    P+    R+ V+ A+ + P  VLD  V D
Sbjct:  158 YEELHHYVTMVASAGVRHIIVHARKCLLKGLSPKENRTVPPLRYDVVYRLKQDFPELYFTLNGGVQSIQHARELLNSTN--------VDGIMIGRAAYNSPWNFRDADRLIFNADRNPNLSRREIIQKYLEYAENLQDKWGSSKPLSELPYTMATSALMKPLLTLFNGEIGGKAFKREIS-AQWARKGQRPE---LREMVENALKVIPVEVLDARVED 363          
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: Dus (domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BKI6_HYAAE)

HSP 1 Score: 150 bits (378), Expect = 5.560e-41
Identity = 86/218 (39.45%), Postives = 121/218 (55.50%), Query Frame = 0
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSS-DPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGD 217
            Y+EL  ++ +V  AGV H +VHARKC LKGLST  NRTIPPLRY+VV++L Q+FPEL   LNGG+ S+    E +  T         V GVM+GRAAY  PW FR  D  +F +  +P  +RREI+ER +    ++  +     P       +    + KPL  L +G  G + F+    R++ AQ        + RD ++ A+ + P+ VLD  V D
Sbjct:   46 YEELHHYIASVARAGVRHFIVHARKCFLKGLSTKDNRTIPPLRYEVVYQLKQDFPELLFTLNGGVQSIQHARELLDTTN--------VDGVMIGRAAYNTPWNFRDADRLIFSAERNPNLSRREIIERYLTYAEDLQSKWGSTKPLSESPYTMATSALLKPLLALFNGEIGGKAFK----RSISAQWARKGPRAELRDMIENAVKVLPDEVLDARVED 251          
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: tRNA-dihydrouridine (synthase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBW8_PYTIN)

HSP 1 Score: 149 bits (376), Expect = 1.100e-39
Identity = 82/218 (37.61%), Postives = 122/218 (55.96%), Query Frame = 0
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSS-DPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGD 217
            Y+EL  F+  V A+GV H VVHARKCLL GLS   NRTIPPLRYD V+RL  +FP L   LNGG+ S+    + +  T         + GVM+GRAAY+ PW FR  D  +FG + +P  +RREI+ + +D   ++ ++     P      H+    + KPL  L +G  G + F++ ++     +S   P+    R+ ++ A+ + P+ VLD  + D
Sbjct:  153 YEELHHFIDTVAASGVRHFVVHARKCLLNGLSPHENRTIPPLRYDWVYRLKDDFPHLRFTLNGGVQSIQHAKQLLDATR--------LDGVMIGRAAYYTPWNFRDADRLLFGEARNPNLSRREIIAQYLDYAEDLQRKWGATEPISEIPYHMPTSALMKPLLGLFAGESGGKAFKRAIAARFADKSLPKPE---IRELIEEAIKVVPDDVLDLRIED 359          
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: tRNA-dihydrouridine (synthase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2Z4_GLOUD)

HSP 1 Score: 145 bits (367), Expect = 2.190e-38
Identity = 83/218 (38.07%), Postives = 124/218 (56.88%), Query Frame = 0
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSS-DPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGD 217
            Y+EL  FV  V ++GV H +VHARKC+LKGLS   NRT+PPL+YD V+RL  +FP+L   LNGG+ S+    E +  T         + GVM+GRAAY  PW FR  D  +FG+  +P  +RREI+E+ +D   ++  +     P       +   T+ KPL  L +G  G + +++E++ A  +     P+    R+ ++ AM + P+ VLD  V D
Sbjct:  156 YEELHHFVTTVASSGVKHFIVHARKCILKGLSPHENRTVPPLKYDFVYRLKADFPDLLFTLNGGVASIQHAKELLDETN--------IDGVMIGRAAYNTPWNFRDADRLIFGAERNPNLSRREIVEKYLDYADDLQAKWGSTVPLGKLNYTMRTSTLMKPLLTLFNGEYGGKAYKREIT-ARWSHKGPRPE---LREMIESAMKVLPDEVLDARVED 361          
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: Dus (domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXI5_9STRA)

HSP 1 Score: 145 bits (366), Expect = 3.140e-38
Identity = 81/218 (37.16%), Postives = 121/218 (55.50%), Query Frame = 0
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSS-DPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGD 217
            Y+EL  F+  V + GV H +VHARKC+LKGLS   NRT+PPL+Y+VV+RL  +FPEL   LNGG+ S+    + +  T         + GVM+GRAAY  PW FR  D  +FG   +P  +RREI+ + ++   E+        P       +   T+ KPL  L +G  GS+ +++E++     +  +     + R+ V+ A+ L P+ VLD  V D
Sbjct:  157 YEELHEFISTVASCGVQHFIVHARKCILKGLSPHENRTVPPLKYNVVYRLKTDFPELRFTLNGGVASIQDAKQLLDETN--------IDGVMIGRAAYNTPWNFRDADRLIFGEERNPNLSRREIVAKYLEYAEELQATWGSTVPIGPLRYTMRTSTLIKPLLALFNGEYGSKAYKREITAQWGKKGPIP----ELREIVEEAVKLIPDEVLDARVED 362          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
tRNA-dihydrouridine6.210e-16196.96synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM3... [more]
Dus2.210e-4341.28domain-containing protein n=1 Tax=Bremia lactucae ... [more]
Dus2.500e-4341.74domain-containing protein n=1 Tax=Phytophthora ram... [more]
Dus4.090e-4342.20domain-containing protein n=25 Tax=Peronosporaceae... [more]
Uncharacterized2.710e-4141.28protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Dus-domain-containing3.620e-4139.91protein n=1 Tax=Plasmopara halstedii TaxID=4781 Re... [more]
Dus5.560e-4139.45domain-containing protein n=1 Tax=Hyaloperonospora... [more]
tRNA-dihydrouridine1.100e-3937.61synthase, putative n=1 Tax=Pythium insidiosum TaxI... [more]
tRNA-dihydrouridine2.190e-3838.07synthase n=1 Tax=Globisporangium ultimum (strain A... [more]
Dus3.140e-3837.16domain-containing protein n=1 Tax=Pythium brassicu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001269tRNA-dihydrouridine synthasePFAMPF01207Duscoord: 3..187
e-value: 4.1E-18
score: 65.5
IPR013785Aldolase-type TIM barrelGENE3D3.20.20.70coord: 1..112
e-value: 1.3E-22
score: 82.5
IPR004653tRNA-dihydrouridine(20/20a) synthasePANTHERPTHR42907FAMILY NOT NAMEDcoord: 1..216
NoneNo IPR availablePANTHERPTHR42907:SF1FMN-LINKED OXIDOREDUCTASES SUPERFAMILY PROTEINcoord: 1..216
NoneNo IPR availableSUPERFAMILY51395FMN-linked oxidoreductasescoord: 4..183

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1124contigEcto-sp9_F_contig1124:24934..26562 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1124.1068.1mRNA_Ecto-sp9_F_contig1124.1068.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig1124 24934..26562 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig1124.1068.1 ID=prot_Ecto-sp9_F_contig1124.1068.1|Name=mRNA_Ecto-sp9_F_contig1124.1068.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=231bp
YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRL
AQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFD
PWTFRHTDSAVFGSSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTR
HLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVD
RAMALFPEGVLDEPVGDTPECAFGSHVRDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001269tRNA_hU_synthase
IPR013785Aldolase_TIM
IPR004653DusA