mRNA_Ecto-sp9_F_contig1124.1068.1 (mRNA) Ectocarpus species9 EcSCA_722f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_Ecto-sp9_F_contig1124.1068.1
Unique NamemRNA_Ecto-sp9_F_contig1124.1068.1
TypemRNA
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Homology
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: tRNA-dihydrouridine (synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM35_ECTSI)

HSP 1 Score: 459 bits (1180), Expect = 6.210e-161
Identity = 223/230 (96.96%), Postives = 225/230 (97.83%), Query Frame = 1
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGDTPECAFGSHVRDD 690
            YDELTTFVRAVKAAG+DHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHI GT EWG YGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSK+DPDTDDFRDAVDRAMAL PEGVLDEPVGDTPECAFGS VRDD
Sbjct:  150 YDELTTFVRAVKAAGIDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHITGTGEWGEYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKIDPDTDDFRDAVDRAMALLPEGVLDEPVGDTPECAFGSQVRDD 379          
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: Dus (domain-containing protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484ECZ8_BRELC)

HSP 1 Score: 159 bits (402), Expect = 2.210e-43
Identity = 90/218 (41.28%), Postives = 127/218 (58.26%), Query Frame = 1
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSS-DPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGD 651
            Y+EL  FV    +AGV H +VHARKCLLKGLST  NRTIPPLRYDVV+RL Q+FP+L   LNGG+ S+    E +  T           G+M+GRAAY +PW FR  D  +F +  +P  +RREI+ER ++   E+ ++     P       +    + KPL  L +G  G + F++E+S A  A+    P+    R+ ++ A+ + P+ VLDE V D
Sbjct:  166 YEELHYFVATAASAGVRHFIVHARKCLLKGLSTKENRTIPPLRYDVVYRLKQDFPDLSFTLNGGVQSIQHARELLNTTN--------ADGIMIGRAAYNNPWNFRDADRLIFDADRNPNLSRREIIERYLNYAEELQEKWGSNEPLSGSPYTMATSMLMKPLLSLFNGEFGGKAFKREVS-AQWAKKGPRPE---LREMIENAIKVLPDKVLDERVED 371          
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: Dus (domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GP67_PHYRM)

HSP 1 Score: 158 bits (400), Expect = 2.500e-43
Identity = 91/218 (41.74%), Postives = 127/218 (58.26%), Query Frame = 1
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSS-DPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGD 651
            Y+EL  FV  V +AGV H++VHARKC+LKGLST  NRTIPPLRYDVV++L Q+FPEL   LNGG+ S+    E +  T         V GVM+GRAAY  PW FR  D  +F +  +P  +RREI+ER ++    +  +     P  +    +    + KPL  L +G  G + F++E+S A  A+    P+    R+ ++ AM + P+ VLD  V D
Sbjct:  133 YEELHHFVATVASAGVRHIIVHARKCILKGLSTKDNRTIPPLRYDVVYQLKQDFPELSFTLNGGVQSIQHARELLDTTN--------VDGVMIGRAAYNTPWNFRDADRLIFNAERNPNLSRREIIERYLEYAENLQAKWGSTVPLGDSPYTMATSALMKPLLALFNGEIGGKAFKREIS-AQWAKKGPRPE---LREMIENAMKVLPDEVLDARVED 338          
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: Dus (domain-containing protein n=25 Tax=Peronosporaceae TaxID=4777 RepID=G4ZWL3_PHYSP)

HSP 1 Score: 158 bits (400), Expect = 4.090e-43
Identity = 92/218 (42.20%), Postives = 126/218 (57.80%), Query Frame = 1
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSS-DPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGD 651
            Y+EL  +V +V  AGV H++VHARKCLLKGLST  NRTIPPLRYDVV+RL Q+FPEL   LNGG+ S+    E +  T         V GVM+GRAAY  PW FR  D  +F +  +P  +RREI+ R +D    +  +     P  +    +    + KPL  L +G  G + F++E+S A  A+    P+    R+ ++ AM + P+ VLD  V D
Sbjct:  161 YEELHHYVSSVTEAGVRHIIVHARKCLLKGLSTKDNRTIPPLRYDVVYRLKQDFPELSFTLNGGVQSIQHARELLDTTN--------VDGVMIGRAAYNTPWNFRDADRLIFNAERNPNLSRREIIARYLDYAEGLQAKWGSTEPLSDSPYTMATSALMKPLLSLFNGEFGGKAFKREIS-AQWAKKGPRPE---LREMIESAMKVLPDEVLDARVED 366          
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CQW7_PYTOL)

HSP 1 Score: 153 bits (386), Expect = 2.710e-41
Identity = 90/218 (41.28%), Postives = 124/218 (56.88%), Query Frame = 1
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFG-SSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGD 651
            Y+EL  F+  V +AGV H +VHARKCLL GLST  NRTIPPL+YD V+RL ++FPEL   LNGG+ S+    E +  T         + GVM+GRAAY  PW FR  D  +FG +S+P  +RREI+   +D   +M  +     P  +    +    + KPL  L SGA G + F+    RA+ AQ        + R+ ++ A+A+ P+ VLD  V D
Sbjct:  141 YEELHHFITTVASAGVTHFIVHARKCLLNGLSTHENRTIPPLKYDWVYRLKEDFPELFFTLNGGVQSIQHAKELLDTTY--------IDGVMIGRAAYNTPWNFRDADRLIFGEASNPNLSRREIIADYLDYAEDMQTKWGVTEPITDVPYCMPTSALMKPLLALFSGAAGGKAFK----RAISAQFAQRGPKPEIRELIETALAVVPDEVLDLRVED 346          
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: Dus-domain-containing (protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AFC1_PLAHL)

HSP 1 Score: 153 bits (387), Expect = 3.620e-41
Identity = 87/218 (39.91%), Postives = 124/218 (56.88%), Query Frame = 1
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSS-DPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGD 651
            Y+EL  +V  V +AGV H++VHARKCLLKGLS   NRT+PPLRYDVV+RL Q+FPEL   LNGG+ S+    E +  T         V G+M+GRAAY  PW FR  D  +F +  +P  +RREI+++ ++    +  +     P       +    + KPL  L +G  G + F++E+S A  A+    P+    R+ V+ A+ + P  VLD  V D
Sbjct:  158 YEELHHYVTMVASAGVRHIIVHARKCLLKGLSPKENRTVPPLRYDVVYRLKQDFPELYFTLNGGVQSIQHARELLNSTN--------VDGIMIGRAAYNSPWNFRDADRLIFNADRNPNLSRREIIQKYLEYAENLQDKWGSSKPLSELPYTMATSALMKPLLTLFNGEIGGKAFKREIS-AQWARKGQRPE---LREMVENALKVIPVEVLDARVED 363          
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: Dus (domain-containing protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BKI6_HYAAE)

HSP 1 Score: 150 bits (378), Expect = 5.560e-41
Identity = 86/218 (39.45%), Postives = 121/218 (55.50%), Query Frame = 1
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSS-DPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGD 651
            Y+EL  ++ +V  AGV H +VHARKC LKGLST  NRTIPPLRY+VV++L Q+FPEL   LNGG+ S+    E +  T         V GVM+GRAAY  PW FR  D  +F +  +P  +RREI+ER +    ++  +     P       +    + KPL  L +G  G + F+    R++ AQ        + RD ++ A+ + P+ VLD  V D
Sbjct:   46 YEELHHYIASVARAGVRHFIVHARKCFLKGLSTKDNRTIPPLRYEVVYQLKQDFPELLFTLNGGVQSIQHARELLDTTN--------VDGVMIGRAAYNTPWNFRDADRLIFSAERNPNLSRREIIERYLTYAEDLQSKWGSTKPLSESPYTMATSALLKPLLALFNGEIGGKAFK----RSISAQWARKGPRAELRDMIENAVKVLPDEVLDARVED 251          
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: tRNA-dihydrouridine (synthase, putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBW8_PYTIN)

HSP 1 Score: 149 bits (376), Expect = 1.100e-39
Identity = 82/218 (37.61%), Postives = 122/218 (55.96%), Query Frame = 1
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSS-DPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGD 651
            Y+EL  F+  V A+GV H VVHARKCLL GLS   NRTIPPLRYD V+RL  +FP L   LNGG+ S+    + +  T         + GVM+GRAAY+ PW FR  D  +FG + +P  +RREI+ + +D   ++ ++     P      H+    + KPL  L +G  G + F++ ++     +S   P+    R+ ++ A+ + P+ VLD  + D
Sbjct:  153 YEELHHFIDTVAASGVRHFVVHARKCLLNGLSPHENRTIPPLRYDWVYRLKDDFPHLRFTLNGGVQSIQHAKQLLDATR--------LDGVMIGRAAYYTPWNFRDADRLLFGEARNPNLSRREIIAQYLDYAEDLQRKWGATEPISEIPYHMPTSALMKPLLGLFAGESGGKAFKRAIAARFADKSLPKPE---IRELIEEAIKVVPDDVLDLRIED 359          
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: tRNA-dihydrouridine (synthase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X2Z4_GLOUD)

HSP 1 Score: 145 bits (367), Expect = 2.190e-38
Identity = 83/218 (38.07%), Postives = 124/218 (56.88%), Query Frame = 1
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSS-DPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGD 651
            Y+EL  FV  V ++GV H +VHARKC+LKGLS   NRT+PPL+YD V+RL  +FP+L   LNGG+ S+    E +  T         + GVM+GRAAY  PW FR  D  +FG+  +P  +RREI+E+ +D   ++  +     P       +   T+ KPL  L +G  G + +++E++ A  +     P+    R+ ++ AM + P+ VLD  V D
Sbjct:  156 YEELHHFVTTVASSGVKHFIVHARKCILKGLSPHENRTVPPLKYDFVYRLKADFPDLLFTLNGGVASIQHAKELLDETN--------IDGVMIGRAAYNTPWNFRDADRLIFGAERNPNLSRREIVEKYLDYADDLQAKWGSTVPLGKLNYTMRTSTLMKPLLTLFNGEYGGKAYKREIT-ARWSHKGPRPE---LREMIESAMKVLPDEVLDARVED 361          
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Match: Dus (domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XXI5_9STRA)

HSP 1 Score: 145 bits (366), Expect = 3.140e-38
Identity = 81/218 (37.16%), Postives = 121/218 (55.50%), Query Frame = 1
Query:    1 YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRLAQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFDPWTFRHTDSAVFGSS-DPGFTRREIMERCVDRFTEMMQEGRREGPECNRTRHLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVDRAMALFPEGVLDEPVGD 651
            Y+EL  F+  V + GV H +VHARKC+LKGLS   NRT+PPL+Y+VV+RL  +FPEL   LNGG+ S+    + +  T         + GVM+GRAAY  PW FR  D  +FG   +P  +RREI+ + ++   E+        P       +   T+ KPL  L +G  GS+ +++E++     +  +     + R+ V+ A+ L P+ VLD  V D
Sbjct:  157 YEELHEFISTVASCGVQHFIVHARKCILKGLSPHENRTVPPLKYNVVYRLKTDFPELRFTLNGGVASIQDAKQLLDETN--------IDGVMIGRAAYNTPWNFRDADRLIFGEERNPNLSRREIVAKYLEYAEELQATWGSTVPIGPLRYTMRTSTLIKPLLALFNGEYGSKAYKREITAQWGKKGPIP----ELREIVEEAVKLIPDEVLDARVED 362          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig1124.1068.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
tRNA-dihydrouridine6.210e-16196.96synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FM3... [more]
Dus2.210e-4341.28domain-containing protein n=1 Tax=Bremia lactucae ... [more]
Dus2.500e-4341.74domain-containing protein n=1 Tax=Phytophthora ram... [more]
Dus4.090e-4342.20domain-containing protein n=25 Tax=Peronosporaceae... [more]
Uncharacterized2.710e-4141.28protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Dus-domain-containing3.620e-4139.91protein n=1 Tax=Plasmopara halstedii TaxID=4781 Re... [more]
Dus5.560e-4139.45domain-containing protein n=1 Tax=Hyaloperonospora... [more]
tRNA-dihydrouridine1.100e-3937.61synthase, putative n=1 Tax=Pythium insidiosum TaxI... [more]
tRNA-dihydrouridine2.190e-3838.07synthase n=1 Tax=Globisporangium ultimum (strain A... [more]
Dus3.140e-3837.16domain-containing protein n=1 Tax=Pythium brassicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig1124contigEcto-sp9_F_contig1124:24934..26562 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-19
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score458.8
Seed ortholog evalue1.5e-126
Seed eggNOG ortholog2880.D7FM35
KEGG koko:K05539,ko:K05542
EggNOG free text desc.tRNA dihydrouridine synthase activity
EggNOG OGsCOG0042@1,KOG2335@2759
EC1.3.1.88
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03016
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptiontRNA-dihydrouridine synthase
Ec32 orthologEc-01_010520.1
Exons3
Model size693
Cds size693
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig1124.1068.1prot_Ecto-sp9_F_contig1124.1068.1Ectocarpus species9 EcSCA_722f femalepolypeptideEcto-sp9_F_contig1124 24934..26562 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928367.200907-CDS-Ecto-sp9_F_contig1124:24933..251191622928367.200907-CDS-Ecto-sp9_F_contig1124:24933..25119Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1124 24934..25119 -
1692277848.425814-CDS-Ecto-sp9_F_contig1124:24933..251191692277848.425814-CDS-Ecto-sp9_F_contig1124:24933..25119Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1124 24934..25119 -
1622928367.2159853-CDS-Ecto-sp9_F_contig1124:25809..259641622928367.2159853-CDS-Ecto-sp9_F_contig1124:25809..25964Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1124 25810..25964 -
1692277848.4364743-CDS-Ecto-sp9_F_contig1124:25809..259641692277848.4364743-CDS-Ecto-sp9_F_contig1124:25809..25964Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1124 25810..25964 -
1622928367.227383-CDS-Ecto-sp9_F_contig1124:26210..265621622928367.227383-CDS-Ecto-sp9_F_contig1124:26210..26562Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1124 26211..26562 -
1692277848.4462008-CDS-Ecto-sp9_F_contig1124:26210..265621692277848.4462008-CDS-Ecto-sp9_F_contig1124:26210..26562Ectocarpus species9 EcSCA_722f femaleCDSEcto-sp9_F_contig1124 26211..26562 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_Ecto-sp9_F_contig1124.1068.1

>prot_Ecto-sp9_F_contig1124.1068.1 ID=prot_Ecto-sp9_F_contig1124.1068.1|Name=mRNA_Ecto-sp9_F_contig1124.1068.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=231bp
YDELTTFVRAVKAAGVDHVVVHARKCLLKGLSTSANRTIPPLRYDVVHRL
AQEFPELEIVLNGGIDSLGAVNEHIAGTEEWGGYGGGVAGVMVGRAAYFD
PWTFRHTDSAVFGSSDPGFTRREIMERCVDRFTEMMQEGRREGPECNRTR
HLCLGTVTKPLGYLSSGARGSRTFRQELSRAVQAQSKVDPDTDDFRDAVD
RAMALFPEGVLDEPVGDTPECAFGSHVRDD*
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mRNA from alignment at Ecto-sp9_F_contig1124:24934..26562-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_Ecto-sp9_F_contig1124.1068.1 ID=mRNA_Ecto-sp9_F_contig1124.1068.1|Name=mRNA_Ecto-sp9_F_contig1124.1068.1|organism=Ectocarpus species9 EcSCA_722f female|type=mRNA|length=1629bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1124:24934..26562- (Ectocarpus species9 EcSCA_722f female)
TACGACGAGCTGACGACGTTCGTGCGAGCAGTGAAAGCGGCGGGCGTCGA CCACGTCGTCGTGCACGCGCGAAAGTGCCTGCTGAAGGGACTGTCGACCT CGGCCAACCGCACCATCCCGCCCCTTCGGTACGACGTCGTGCACCGGCTG GCGCAAGAGTTTCCTGAGTTGGAGATCGTTCTGAACGGCGGCATTGACTC CCTCGGAGCCGTTAACGAACACATCGCCGGCACGGAGGAGTGGGGGGGGT ACGGAGGCGGCGTCGCCGGGGTCATGGTGGGGCGCGCGGCGTACTTCGAC CCCTGGACGTTTCGGCATACGGACAGCGCCGTTTTTGGGTCGTCAGACCC AGGTGCGCGTGGAACTTCTGAGAGTGTTAAAAAACGCCAGTAGTAGCGAC AGAACGAGCGACAATTTCGGGGCTGGGTATGACCCAACCGCCCCCAGCTT TAGTGGGGCACACTTGGGGGGCTTGTTAGACCCTGCCAGGGGTCCTACCC TGCCTGCGTTGTGACCCTTAAGCGGGACTAGAAATCGTTTGTGTGTGTGG TAGCGGCGTAAAATTAACGACCTTTCTGCCCGTCGTGTGTCGCTGCAGGG TTCACGAGGCGGGAGATAATGGAACGCTGCGTGGACAGGTTCACGGAGAT GATGCAGGAAGGCCGGCGGGAGGGGCCGGAGTGCAACCGAACCCGGCATC TCTGCCTCGGCACCGTCACGAAACCTCTAGGCTACCTCTCTTCCGGCGCG AGGGTGAGAGCGAGAGTGCAAACGATCAAACACGCCGCGTTTTTTTTATG TGTTGAGGGTAATGATGGAACGCTGCGCTGTGCGTATGTCGCAGTCTGAG TATAAGATAGAATCGCTCATGGCCAGCTGTGCGCACCTCACAAGAGGGCA CGTTATCCACGAAATATGACGGTTTGGTTGCGTTGCACACGTACCTTTCG TAGCCTTTGCCCCGCAAAACTCGTTTCTTCACACGACGTTTTATAGTGAA GACAACAGCACAACAATAACAACAACTGCAACAACATGCCTTTCCGTTTG CCGGTCTCATCGCTAGAGTCGAGGTGCACGCCACGAGTCGGCGTTTTCGT GGGGCTAGTGTAGTGTTATCGCGCGGGGGGTGGTGTGGAACTACCCTAGA CTATGCCATGAGCACGAAACGAGGCGTCATGGTTCGGTATGGGTTGTTCG TCACACGGTCATGGCTACATGGCACACGGTGCGGCAGTCACAGCCAGCGT AAGAGACAAGACCCCTGGCACCTCTTAACGCGAATCTACGCCACGAAGAA ACTGGTGACGGCCGCGCGCACGCACGCTCACGTATATTCCACGGCCTCAA TACCCTGTTTCCTCTCCCGAGCTAATCTCTTGCTCTTTCTTGCCGTTCCT CTGCACCTCCTTCCTGTTCGTGCGTGCGGCCCAAACACCGCAGGGCAGCA GGACGTTTCGGCAGGAGTTGAGCCGCGCCGTGCAGGCTCAGTCGAAGGTC GATCCTGACACGGACGACTTCCGAGATGCTGTGGATCGGGCCATGGCACT CTTCCCGGAGGGGGTGCTTGACGAGCCCGTGGGGGACACGCCAGAGTGCG CCTTTGGCTCGCACGTTCGCGACGATTAG
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Coding sequence (CDS) from alignment at Ecto-sp9_F_contig1124:24934..26562-

>mRNA_Ecto-sp9_F_contig1124.1068.1 ID=mRNA_Ecto-sp9_F_contig1124.1068.1|Name=mRNA_Ecto-sp9_F_contig1124.1068.1|organism=Ectocarpus species9 EcSCA_722f female|type=CDS|length=1386bp|location=Sequence derived from alignment at Ecto-sp9_F_contig1124:24934..26562- (Ectocarpus species9 EcSCA_722f female)
TACGACGAGCTGACGACGTTCGTGCGAGCAGTGAAAGCGGCGGGCGTCGA
CCACGTCGTCGTGCACGCGCGAAAGTGCCTGCTGAAGGGACTGTCGACCT
CGGCCAACCGCACCATCCCGCCCCTTCGGTACGACGTCGTGCACCGGCTG
GCGCAAGAGTTTCCTGAGTTGGAGATCGTTCTGAACGGCGGCATTGACTC
CCTCGGAGCCGTTAACGAACACATCGCCGGCACGGAGGAGTGGGGGGGGT
ACGGAGGCGGCGTCGCCGGGGTCATGGTGGGGCGCGCGGCGTACTTCGAC
CCCTGGACGTTTCGGCATACGGACAGCGCCGTTTTTGGGTCGTCAGACCC
AGTACGACGAGCTGACGACGTTCGTGCGAGCAGTGAAAGCGGCGGGCGTC
GACCACGTCGTCGTGCACGCGCGAAAGTGCCTGCTGAAGGGACTGTCGAC
CTCGGCCAACCGCACCATCCCGCCCCTTCGGTACGACGTCGTGCACCGGC
TGGCGCAAGAGTTTCCTGAGTTGGAGATCGTTCTGAACGGCGGCATTGAC
TCCCTCGGAGCCGTTAACGAACACATCGCCGGCACGGAGGAGTGGGGGGG
GTACGGAGGCGGCGTCGCCGGGGTCATGGTGGGGCGCGCGGCGTACTTCG
ACCCCTGGACGTTTCGGCATACGGACAGCGCCGTTTTTGGGTCGTCAGAC
CCAGGGTTCACGAGGCGGGAGATAATGGAACGCTGCGTGGACAGGTTCAC
GGAGATGATGCAGGAAGGCCGGCGGGAGGGGCCGGAGTGCAACCGAACCC
GGCATCTCTGCCTCGGCACCGTCACGAAACCTCTAGGCTACCTCTCTTCC
GGCGCGAGGGGTTCACGAGGCGGGAGATAATGGAACGCTGCGTGGACAGG
TTCACGGAGATGATGCAGGAAGGCCGGCGGGAGGGGCCGGAGTGCAACCG
AACCCGGCATCTCTGCCTCGGCACCGTCACGAAACCTCTAGGCTACCTCT
CTTCCGGCGCGAGGGGCAGCAGGACGTTTCGGCAGGAGTTGAGCCGCGCC
GTGCAGGCTCAGTCGAAGGTCGATCCTGACACGGACGACTTCCGAGATGC
TGTGGATCGGGCCATGGCACTCTTCCCGGAGGGGGTGCTTGACGAGCCCG
TGGGGGACACGCCAGAGTGCGCCTTTGGCTCGCACGTTCGCGACGATTAG
GGCAGCAGGACGTTTCGGCAGGAGTTGAGCCGCGCCGTGCAGGCTCAGTC
GAAGGTCGATCCTGACACGGACGACTTCCGAGATGCTGTGGATCGGGCCA
TGGCACTCTTCCCGGAGGGGGTGCTTGACGAGCCCGTGGGGGACACGCCA
GAGTGCGCCTTTGGCTCGCACGTTCGCGACGATTAG
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