prot_Ecto-sp9_F_contig11213.1048.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11213.1048.1
Unique Nameprot_Ecto-sp9_F_contig11213.1048.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length571
Homology
BLAST of mRNA_Ecto-sp9_F_contig11213.1048.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWT1_9PHAE)

HSP 1 Score: 659 bits (1701), Expect = 3.470e-229
Identity = 414/570 (72.63%), Postives = 422/570 (74.04%), Query Frame = 0
Query:    1 MLPSTTSQAVVDFPSSGVSPSAMTAEAMAHDEDGFVDLYKGALAVTPPPSSNARSPQMQWGTGLPFAGNAGDVDHIAAPAPASGSIEFGGSRTNPFSPLPPSSAPXTXLQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPDHRVCLLAVGTKKQRLGGADGTVTITGGGGGS---AMDSGASLDDVIGMLTAEINRNGREAETERVETGERAVLQVRALARSELRYGIVLLEVEGSRAAAIATARELKAANPSTPIIAVASPHAMLTPAQLLSSEGWRDFNEILPFPVSAATVRGLATRYLLAPPGVAAAXXXXXXXXXXXXXXXXXXXXXXXXXXLGRHTAGSGSCCGGTLVPSLPVAGGSGEVPXXXXXXXXXXX--GTGAALSPHGVAWSVLPDAEEGVLLPSQPLLSVTDPCARRALEGLARPRAAMSSPSSSSPATVEETLASLKRRVFGGSVEDRALSCGLFGEEFEMKNAEIEDSREYDFVFRHGTILVRVEEGVGGEVVPMVGILCS 565
            MLPSTTSQAVVDFPSSGVSPSAMTAEAMAHDEDGFVDLYKGALAVTPPPSSNARSPQMQWGT LPFAGNAGD DH AAPAP SGSIEFG S  NPFSP       X XLQ                                       XX                                 XXXX     APDHRVCLLAVGTKKQRL GADGTVT+          AMDSGASLDDVIGMLTAEINRNGREAETERVETGERAVLQVRALARSELRYGIVLLEVEGSRAAAIATARELKAANPSTPIIAVA P AMLTPAQLLSSEGWRDFNEILPFPVSAATVRGLATRYLLAPPGVAAA                          LG+HTAGSGSCCGGTLVPSLPVAGGSGEVPXXXXXXXXXXX  GTGAALSPHGVAWS+L DAEEGVLLPSQPLLSVT+PCARR       PRAAM+SPSSSSP+T+EETLASLKRRVFGGS EDRAL CGLFGEEFEMKNAEIED REYDFVFRHGTILVRVEEG+ GEVVPMV  LC 
Sbjct:    1 MLPSTTSQAVVDFPSSGVSPSAMTAEAMAHDEDGFVDLYKGALAVTPPPSSNARSPQMQWGTALPFAGNAGDDDHNAAPAPDSGSIEFGSSGINPFSPPXXXXXXXXXLQANKQSLLPASSSSVAVSSVAATPTPVPPLPTARPPSAATXXPPRAAKPFPGPTKARAKGGARQPRRVKLHDDGDXXXXPEE-GAPDHRVCLLAVGTKKQRLRGADGTVTVAXXXXXXXXXAMDSGASLDDVIGMLTAEINRNGREAETERVETGERAVLQVRALARSELRYGIVLLEVEGSRAAAIATARELKAANPSTPIIAVAYPRAMLTPAQLLSSEGWRDFNEILPFPVSAATVRGLATRYLLAPPGVAAAAASSGMAGEPISSGPSTAAATFGQ--LGQHTAGSGSCCGGTLVPSLPVAGGSGEVPXXXXXXXXXXXXXGTGAALSPHGVAWSLLRDAEEGVLLPSQPLLSVTNPCARR-------PRAAMTSPSSSSPSTLEETLASLKRRVFGGSEEDRALPCGLFGEEFEMKNAEIED-REYDFVFRHGTILVRVEEGLNGEVVPMVFSLCE 559          
BLAST of mRNA_Ecto-sp9_F_contig11213.1048.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN91_ECTSI)

HSP 1 Score: 250 bits (638), Expect = 1.340e-75
Identity = 178/268 (66.42%), Postives = 181/268 (67.54%), Query Frame = 0
Query:    1 MLPSTTSQAVVDFPSSGVSPSAMTAEAMAHDEDGFVDLYKGALAVTPPPSSNARSPQMQWGTGLPFAGNAGDVDHIAAPAPASGSIEFGGSRTNPFSPLPPSSAPXTXLQTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSAPDHRVCLLAVGTKKQRLGGADGTVTITGGGGGS-AMDSGASLDDVIGMLTAEINRNGREAETERVETGERAVLQ 267
            MLPST SQAVVDFPSSGVSPSAMTAEAMAHDED FVDLYKGALAVTPPP SNARSPQMQWGT LPFAGNAG+ DHIAAPAPASGSIEFGG+R NPFSPLP SSA  T LQT                            XXXXXXXXXXXXX                               XXXXXXXX  APDHRVCLLAVGTKKQRLG                AMDSGASLDDVIGMLTAEINRNGREAETERV+TGERAVLQ
Sbjct:    1 MLPSTISQAVVDFPSSGVSPSAMTAEAMAHDEDSFVDLYKGALAVTPPPPSNARSPQMQWGTALPFAGNAGNDDHIAAPAPASGSIEFGGTRANPFSPLPLSSASPTTLQTNKQSLLPASRSSVAVAAVAATPTPVLPPXXXXXXXXXXXXXPRAAKPSSGPTKARAKGGARKPRRVKLHDDGXXXXXXXX-GAPDHRVCLLAVGTKKQRLGXXXXXXXXXXXXXXXXAMDSGASLDDVIGMLTAEINRNGREAETERVDTGERAVLQ 267          
BLAST of mRNA_Ecto-sp9_F_contig11213.1048.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN90_ECTSI)

HSP 1 Score: 147 bits (372), Expect = 3.750e-37
Identity = 78/85 (91.76%), Postives = 79/85 (92.94%), Query Frame = 0
Query:  481 MSSPSSSSPATVEETLASLKRRVFGGSVEDRALSCGLFGEEFEMKNAEIEDSREYDFVFRHGTILVRVEEGVGGEVVPMVGILCS 565
            M+SPSSSSPATVEETLASLKRRVFGGS EDR LSCGLFGEEFEMKNAEIED REYDFVFRHGTILVRVEEGVGGEVVPMV  LC 
Sbjct:    1 MASPSSSSPATVEETLASLKRRVFGGSEEDRELSCGLFGEEFEMKNAEIED-REYDFVFRHGTILVRVEEGVGGEVVPMVFSLCE 84          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11213.1048.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized3.470e-22972.63protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.340e-7566.42protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.750e-3791.76protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11213contigEcto-sp9_F_contig11213:169..3327 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11213.1048.1mRNA_Ecto-sp9_F_contig11213.1048.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11213 169..3327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11213.1048.1 ID=prot_Ecto-sp9_F_contig11213.1048.1|Name=mRNA_Ecto-sp9_F_contig11213.1048.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=571bp
MLPSTTSQAVVDFPSSGVSPSAMTAEAMAHDEDGFVDLYKGALAVTPPPS
SNARSPQMQWGTGLPFAGNAGDVDHIAAPAPASGSIEFGGSRTNPFSPLP
PSSAPPTTLQTNKQSLLPASSSGVAVSAVAATPTPVPPPPTARPAAAAAA
AAPPRAAKTSSGPTKARAKGGARQQRRVKLHDDGDDDDDPEDSAPDHRVC
LLAVGTKKQRLGGADGTVTITGGGGGSAMDSGASLDDVIGMLTAEINRNG
REAETERVETGERAVLQVRALARSELRYGIVLLEVEGSRAAAIATARELK
AANPSTPIIAVASPHAMLTPAQLLSSEGWRDFNEILPFPVSAATVRGLAT
RYLLAPPGVAAAAASSGMAGEPISSGPSAAAAAATFGQLGRHTAGSGSCC
GGTLVPSLPVAGGSGEVPPPPQQQQQQQQGTGAALSPHGVAWSVLPDAEE
GVLLPSQPLLSVTDPCARRALEGLARPRAAMSSPSSSSPATVEETLASLK
RRVFGGSVEDRALSCGLFGEEFEMKNAEIEDSREYDFVFRHGTILVRVEE
GVGGEVVPMVGILCSTLLSD*
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