prot_Ecto-sp9_F_contig11190.1022.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig11190.1022.1
Unique Nameprot_Ecto-sp9_F_contig11190.1022.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length176
Homology
BLAST of mRNA_Ecto-sp9_F_contig11190.1022.1 vs.
Match: Tr-type (G domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4J4_9PHAE)

HSP 1 Score: 270 bits (689), Expect = 8.420e-86
Identity = 170/181 (93.92%), Postives = 172/181 (95.03%), Query Frame = 0
Query:    1 MAESWEDIDKQTKKSGGGLNPAAASFSFNPAVASWSPGGAAPXXXXXXXXXXXXMQSAQAMAADKVGAVAEGMREVSISSAPXXXXXXXXXXX-----EESKDQSKGAGDGGDAEEMDENDPLWKATLQVANGDRTKALKMLEDPDALMANPEINKIIAEGAASGDAALEVVEGQYPEQAG 176
            MAESWEDIDKQTKKSGGGLNPAAASFSFNPAVASWSPGGAAP  XXXXXXXXXXMQSAQAMAADKVGAVAEGMREVSISSAPXXXXXXXXXXX     E+SKDQS+GAGDGGDAEEMDENDPLWKATLQVANGDR KALKMLEDPDALMANPEINKIIAEGA SGDAALEVVEGQYPEQAG
Sbjct:    1 MAESWEDIDKQTKKSGGGLNPAAASFSFNPAVASWSPGGAAPTPXXXXXXXXXXMQSAQAMAADKVGAVAEGMREVSISSAPXXXXXXXXXXXXXXXAEDSKDQSEGAGDGGDAEEMDENDPLWKATLQVANGDRAKALKMLEDPDALMANPEINKIIAEGAVSGDAALEVVEGQYPEQAG 181          
BLAST of mRNA_Ecto-sp9_F_contig11190.1022.1 vs.
Match: Sup35, (eukaryotic translation termination factor eRF3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G008_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 1.760e-83
Identity = 171/181 (94.48%), Postives = 173/181 (95.58%), Query Frame = 0
Query:    1 MAESWEDIDKQTKKSGGGLNPAAASFSFNPAVASWSPGGAAPXXXXXXXXXXXXMQSAQAMAADKVGAVAEGMREVSISSAPXXXXXXXXXXX-----EESKDQSKGAGDGGDAEEMDENDPLWKATLQVANGDRTKALKMLEDPDALMANPEINKIIAEGAASGDAALEVVEGQYPEQAG 176
            MAESWEDIDKQTKKSGGGLNPAAASFSFNPAVASWSPGGAAPXXXXXXXXXXXX QSAQAMAADKVGAVAEGMREVSISSAPXXXXXXXXXXX     EESKDQS+G GDGGDAEEMDENDPLWKATLQVANGDR KALKMLEDPDALMANPE+NKIIAEGAASGDAALEVVEGQYPEQAG
Sbjct:    1 MAESWEDIDKQTKKSGGGLNPAAASFSFNPAVASWSPGGAAPXXXXXXXXXXXXXQSAQAMAADKVGAVAEGMREVSISSAPXXXXXXXXXXXXXXXXEESKDQSEGVGDGGDAEEMDENDPLWKATLQVANGDRAKALKMLEDPDALMANPEVNKIIAEGAASGDAALEVVEGQYPEQAG 181          
BLAST of mRNA_Ecto-sp9_F_contig11190.1022.1 vs.
Match: Sup35, (eukaryotic translation termination factor eRF3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYC4_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 5.580e-15
Identity = 64/150 (42.67%), Postives = 86/150 (57.33%), Query Frame = 0
Query:   17 GGLNPAAASFSFNPAVASWSPGGAAPXXXXXXXXXXXXMQSAQAMAADKVGAVAEGMREVSISSAPXXXXXXXXXXXEESKDQSKGAGDGGDAEE-MDENDPLWKATLQVANGDRTKALKMLEDPDALMANPEINKIIAEGAASGDAALE 165
            G LNP A SF+FNP  ++W+P     XXXXXX      +++AQA A DKV    + +    I+S                      AG+G D EE +DE DPLW+ TL++A GDR +A +MLE+PDALMA+PEI  +I   AA+ DAA +
Sbjct:    8 GALNPNAKSFTFNPNASTWAPXXX--XXXXXXQSQPAAIRTAQAAATDKV---TDQLAAAKIASQ---------------------AGEGSDDEEPIDETDPLWQVTLRIAGGDRARAKRMLENPDALMAHPEIVAVIDATAAADDAAAD 131          
BLAST of mRNA_Ecto-sp9_F_contig11190.1022.1 vs.
Match: SUP35 (protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YS44_SYMMI)

HSP 1 Score: 71.6 bits (174), Expect = 4.960e-12
Identity = 33/50 (66.00%), Postives = 41/50 (82.00%), Query Frame = 0
Query:  110 EEMDENDPLWKATLQVANGDRTKALKMLEDPDALMANPEINKIIAEGAAS 159
            EE+DENDPLWKATLQ+A GDR  ALK+LEDPDALM  PE+ K++ E  ++
Sbjct:   54 EEIDENDPLWKATLQIAKGDRKVALKLLEDPDALMQYPEVAKMMEEAEST 103          
BLAST of mRNA_Ecto-sp9_F_contig11190.1022.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P3V7_HETAK)

HSP 1 Score: 72.4 bits (176), Expect = 1.230e-11
Identity = 38/60 (63.33%), Postives = 45/60 (75.00%), Query Frame = 0
Query:  110 EEMDENDPLWKATLQVANGDRTKALKMLEDPDALMANPEINKIIAEGAASGDAALEVVEG 169
            EE+DENDPLWK TLQ+A GDR  ALK+LEDPDALM+ PE+  ++     SGD  LEV EG
Sbjct:  122 EEIDENDPLWKVTLQLAGGDRAAALKLLEDPDALMSRPEVVAVLG----SGD--LEVTEG 175          
BLAST of mRNA_Ecto-sp9_F_contig11190.1022.1 vs.
Match: Peptide (chain release factor subunit 3 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KGS5_FISSO)

HSP 1 Score: 62.4 bits (150), Expect = 3.420e-8
Identity = 30/54 (55.56%), Postives = 41/54 (75.93%), Query Frame = 0
Query:  110 EEMDENDPLWKATLQVANGDRTKALKMLEDPDALMANPEINKIIAEGAASGDAA 163
            +E+DE DPLW+A L++++GDR KALK++ +PD L A PEI KI+ E    GDAA
Sbjct:   41 DEIDEQDPLWQAVLKISDGDREKALKLINNPDELAAYPEIQKILEE--TGGDAA 92          
BLAST of mRNA_Ecto-sp9_F_contig11190.1022.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DPN8_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 8.680e-8
Identity = 24/40 (60.00%), Postives = 35/40 (87.50%), Query Frame = 0
Query:  110 EEMDENDPLWKATLQVANGDRTKALKMLEDPDALMANPEI 149
            +++DENDPLWK TL++A GDR +A+KML DPD+LM +P++
Sbjct:   54 DDIDENDPLWKVTLEIAGGDRDRAIKMLGDPDSLMKHPQV 93          
BLAST of mRNA_Ecto-sp9_F_contig11190.1022.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WBC9_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.540e-7
Identity = 24/50 (48.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:  111 EMDENDPLWKATLQVANGDRTKALKMLEDPDALMANPEINKIIAEGAASG 160
            ++DENDPLWK  L++A GDR +A++M+ DPD L   PE++ ++ + AA G
Sbjct:   45 DIDENDPLWKVVLKIAEGDRDRAMRMIADPDCLAQYPEVDAVLEQMAAEG 94          
BLAST of mRNA_Ecto-sp9_F_contig11190.1022.1 vs.
Match: Hypothetical (protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZIV8_TRICV)

HSP 1 Score: 53.9 bits (128), Expect = 2.850e-5
Identity = 21/39 (53.85%), Postives = 30/39 (76.92%), Query Frame = 0
Query:  111 EMDENDPLWKATLQVANGDRTKALKMLEDPDALMANPEI 149
            EMDE+DPLW+  L++A GDR +A+K++ DPD L   PE+
Sbjct:   57 EMDESDPLWQVVLKIAEGDRDRAMKLINDPDGLTKYPEV 95          
BLAST of mRNA_Ecto-sp9_F_contig11190.1022.1 vs.
Match: Hypothetical (protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KHT6_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 3.810e-5
Identity = 24/49 (48.98%), Postives = 35/49 (71.43%), Query Frame = 0
Query:  111 EMDENDPLWKATL-QVANGDRTKALKMLEDPDALMANPEINKIIAEGAA 158
            ++DE+DPLW+  L ++ NGDR +ALK++ DPD L   PE+  I+A G A
Sbjct:   41 DIDESDPLWQVVLTKICNGDRDRALKLINDPDQLTQYPEVEAILAAGDA 89          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig11190.1022.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
Tr-type8.420e-8693.92G domain-containing protein n=1 Tax=Ectocarpus sp.... [more]
Sup35,1.760e-8394.48eukaryotic translation termination factor eRF3 n=1... [more]
Sup35,5.580e-1542.67eukaryotic translation termination factor eRF3 n=1... [more]
SUP354.960e-1266.00protein (Fragment) n=1 Tax=Symbiodinium microadria... [more]
Hypothetical1.230e-1163.33protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Peptide3.420e-855.56chain release factor subunit 3 n=2 Tax=Fistulifera... [more]
Hypothetical8.680e-860.00protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Hypothetical1.540e-748.00protein (Fragment) n=1 Tax=Pseudictyota dubia TaxI... [more]
Hypothetical2.850e-553.85protein n=1 Tax=Trieres chinensis TaxID=1514140 Re... [more]
Hypothetical3.810e-548.98protein n=1 Tax=Skeletonema marinoi TaxID=267567 R... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig11190contigEcto-sp9_F_contig11190:877..3322 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig11190.1022.1mRNA_Ecto-sp9_F_contig11190.1022.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig11190 877..3705 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig11190.1022.1 ID=prot_Ecto-sp9_F_contig11190.1022.1|Name=mRNA_Ecto-sp9_F_contig11190.1022.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=176bp
MAESWEDIDKQTKKSGGGLNPAAASFSFNPAVASWSPGGAAPAPAAAAAP
APSPMQSAQAMAADKVGAVAEGMREVSISSAPPAAAASGGGGAEESKDQS
KGAGDGGDAEEMDENDPLWKATLQVANGDRTKALKMLEDPDALMANPEIN
KIIAEGAASGDAALEVVEGQYPEQAG
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